RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PXDNQ92626 1479 aa23.52■■□□□ 1.36
SSR4-204ENST00000370087 NAIPQ13075 1403 aa23.51■■□□□ 1.35
SSR4-204ENST00000370087 FNBP4Q8N3X1 1017 aaPredicted RBP23.51■■□□□ 1.35
SSR4-204ENST00000370087 TRPC5Q9UL62 973 aaPredicted RBP23.5■■□□□ 1.35
SSR4-204ENST00000370087 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
SSR4-204ENST00000370087 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
SSR4-204ENST00000370087 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.46■■□□□ 1.35
SSR4-204ENST00000370087 VGFO15240 615 aaPredicted RBP23.45■■□□□ 1.34
SSR4-204ENST00000370087 XPCQ01831 940 aaPredicted RBP23.43■■□□□ 1.34
SSR4-204ENST00000370087 GLI3P10071 1580 aa23.43■■□□□ 1.34
SSR4-204ENST00000370087 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
SSR4-204ENST00000370087 IFT172Q9UG01 1749 aa23.42■■□□□ 1.34
SSR4-204ENST00000370087 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
SSR4-204ENST00000370087 ESCO1Q5FWF5 840 aa23.41■■□□□ 1.34
SSR4-204ENST00000370087 NPHP3Q7Z494 1330 aa23.4■■□□□ 1.34
SSR4-204ENST00000370087 KNDC1Q76NI1 1749 aa23.4■■□□□ 1.34
SSR4-204ENST00000370087 FMN2Q9NZ56 1722 aa23.4■■□□□ 1.34
SSR4-204ENST00000370087 RPGRIP1LQ68CZ1 1315 aa23.39■■□□□ 1.34
SSR4-204ENST00000370087 FOXO3O43524 673 aa23.37■■□□□ 1.33
SSR4-204ENST00000370087 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
SSR4-204ENST00000370087 NUTM2FA1L443 756 aa23.36■■□□□ 1.33
SSR4-204ENST00000370087 USP32Q8NFA0 1604 aa23.36■■□□□ 1.33
SSR4-204ENST00000370087 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
SSR4-204ENST00000370087 RALGAPBQ86X10 1494 aa23.36■■□□□ 1.33
SSR4-204ENST00000370087 ADGRF5Q8IZF2 1346 aa23.35■■□□□ 1.33
SSR4-204ENST00000370087 TECPR2O15040 1411 aa23.35■■□□□ 1.33
SSR4-204ENST00000370087 SLIT2O94813 1529 aa23.35■■□□□ 1.33
SSR4-204ENST00000370087 GJD4Q96KN9 370 aaPredicted RBP23.35■■□□□ 1.33
SSR4-204ENST00000370087 KIF1AQ12756 1690 aa23.35■■□□□ 1.33
SSR4-204ENST00000370087 RGPD8O14715 1765 aaPredicted RBP23.35■■□□□ 1.33
SSR4-204ENST00000370087 WAPLQ7Z5K2 1190 aa23.34■■□□□ 1.33
SSR4-204ENST00000370087 ABCA3Q99758 1704 aa23.33■■□□□ 1.33
SSR4-204ENST00000370087 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
SSR4-204ENST00000370087 FOXD1Q16676 465 aa23.32■■□□□ 1.32
SSR4-204ENST00000370087 STK26Q9P289 416 aa23.32■■□□□ 1.32
SSR4-204ENST00000370087 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
SSR4-204ENST00000370087 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
SSR4-204ENST00000370087 SPATA31E1Q6ZUB1 1445 aa23.29■■□□□ 1.32
SSR4-204ENST00000370087 CCDC125Q86Z20 511 aa23.29■■□□□ 1.32
SSR4-204ENST00000370087 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
SSR4-204ENST00000370087 SPATA31A3Q5VYP0 1347 aa23.28■■□□□ 1.32
SSR4-204ENST00000370087 BLMP54132 1417 aaPredicted RBP23.27■■□□□ 1.32
SSR4-204ENST00000370087 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
SSR4-204ENST00000370087 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
SSR4-204ENST00000370087 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
SSR4-204ENST00000370087 NWD2Q9ULI1 1742 aa23.25■■□□□ 1.31
SSR4-204ENST00000370087 ABCC11Q96J66 1382 aa23.25■■□□□ 1.31
SSR4-204ENST00000370087 DEFB132Q7Z7B7 95 aa23.24■■□□□ 1.31
SSR4-204ENST00000370087 RGL3Q3MIN7 710 aa23.23■■□□□ 1.31
SSR4-204ENST00000370087 YTHDC2Q9H6S0 1430 aaKnown RBP23.23■■□□□ 1.31
SSR4-204ENST00000370087 TNS3Q68CZ2 1445 aa23.22■■□□□ 1.31
SSR4-204ENST00000370087 LRP5O75197 1615 aa23.22■■□□□ 1.31
SSR4-204ENST00000370087 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
SSR4-204ENST00000370087 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
SSR4-204ENST00000370087 CABLES1Q8TDN4 633 aa23.2■■□□□ 1.3
SSR4-204ENST00000370087 ANKRD30BQ9BXX2 1392 aa23.19■■□□□ 1.3
SSR4-204ENST00000370087 SEPT12Q8IYM1 358 aa23.18■■□□□ 1.3
SSR4-204ENST00000370087 PLEKHG5O94827 1062 aa23.17■■□□□ 1.3
SSR4-204ENST00000370087 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
SSR4-204ENST00000370087 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
SSR4-204ENST00000370087 VPS72Q15906 364 aa23.15■■□□□ 1.3
SSR4-204ENST00000370087 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
SSR4-204ENST00000370087 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
SSR4-204ENST00000370087 HAP1P54257 671 aaPredicted RBP23.11■■□□□ 1.29
SSR4-204ENST00000370087 ALS2Q96Q42 1657 aa23.11■■□□□ 1.29
SSR4-204ENST00000370087 ONECUT3O60422 494 aaPredicted RBP23.1■■□□□ 1.29
SSR4-204ENST00000370087 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
SSR4-204ENST00000370087 KRT27Q7Z3Y8 459 aa23.09■■□□□ 1.29
SSR4-204ENST00000370087 MPHOSPH9Q99550 1183 aa23.09■■□□□ 1.29
SSR4-204ENST00000370087 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
SSR4-204ENST00000370087 ADGRB2O60241 1585 aa23.09■■□□□ 1.29
SSR4-204ENST00000370087 SF3B2Q13435 895 aaKnown RBP23.08■■□□□ 1.29
SSR4-204ENST00000370087 SIRT1Q96EB6 747 aa23.08■■□□□ 1.29
SSR4-204ENST00000370087 FAM83GA6ND36 823 aa23.07■■□□□ 1.28
SSR4-204ENST00000370087 PSME1Q06323 249 aa23.07■■□□□ 1.28
SSR4-204ENST00000370087 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
SSR4-204ENST00000370087 LMOD2Q6P5Q4 547 aa23.07■■□□□ 1.28
SSR4-204ENST00000370087 C14orf93Q9H972 538 aaKnown RBP23.07■■□□□ 1.28
SSR4-204ENST00000370087 RGPD1P0DJD0 1748 aa23.07■■□□□ 1.28
SSR4-204ENST00000370087 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
SSR4-204ENST00000370087 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
SSR4-204ENST00000370087 TNS1Q9HBL0 1735 aaKnown RBP23.06■■□□□ 1.28
SSR4-204ENST00000370087 PSDA5PKW4 1024 aaPredicted RBP23.06■■□□□ 1.28
SSR4-204ENST00000370087 CFAP70Q5T0N1 1121 aa23.06■■□□□ 1.28
SSR4-204ENST00000370087 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
SSR4-204ENST00000370087 DLC1Q96QB1 1528 aa23.04■■□□□ 1.28
SSR4-204ENST00000370087 PMFBP1Q8TBY8 1022 aa23.04■■□□□ 1.28
SSR4-204ENST00000370087 THSD7AQ9UPZ6 1657 aa23.03■■□□□ 1.28
SSR4-204ENST00000370087 ANKARQ7Z5J8 1434 aa23.03■■□□□ 1.28
SSR4-204ENST00000370087 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
SSR4-204ENST00000370087 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
SSR4-204ENST00000370087 ADGRB1O14514 1584 aa23.01■■□□□ 1.27
SSR4-204ENST00000370087 A0A0G2JS52 829 aa23■■□□□ 1.27
SSR4-204ENST00000370087 MYT1Q01538 1121 aa23■■□□□ 1.27
SSR4-204ENST00000370087 HRCP23327 699 aa22.99■■□□□ 1.27
SSR4-204ENST00000370087 FAM182BQ5T319 152 aa22.99■■□□□ 1.27
SSR4-204ENST00000370087 BTG4Q9NY30 223 aa22.99■■□□□ 1.27
SSR4-204ENST00000370087 BAG6P46379 1132 aa22.98■■□□□ 1.27
SSR4-204ENST00000370087 PRR36Q9H6K5 1346 aa22.98■■□□□ 1.27
SSR4-204ENST00000370087 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms