RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
PRPF38B-203ENST00000370025 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
PRPF38B-203ENST00000370025 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
PRPF38B-203ENST00000370025 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
PRPF38B-203ENST00000370025 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
PRPF38B-203ENST00000370025 NPC1L1Q9UHC9 1359 aa13.28□□□□□ -0.28
PRPF38B-203ENST00000370025 PPP4R2Q9NY27 417 aa13.28□□□□□ -0.28
PRPF38B-203ENST00000370025 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
PRPF38B-203ENST00000370025 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.29
PRPF38B-203ENST00000370025 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.29
PRPF38B-203ENST00000370025 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
PRPF38B-203ENST00000370025 POGKQ9P215 609 aa13.27□□□□□ -0.29
PRPF38B-203ENST00000370025 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.295e-7■□□□□ 8.3
PRPF38B-203ENST00000370025 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
PRPF38B-203ENST00000370025 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
PRPF38B-203ENST00000370025 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
PRPF38B-203ENST00000370025 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
PRPF38B-203ENST00000370025 PTPRMP28827 1452 aa13.23□□□□□ -0.29
PRPF38B-203ENST00000370025 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
PRPF38B-203ENST00000370025 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
PRPF38B-203ENST00000370025 NEFMP07197 916 aa13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 NLRP1Q9C000 1473 aa13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.29
PRPF38B-203ENST00000370025 UBR1Q8IWV7 1749 aa13.2□□□□□ -0.3
PRPF38B-203ENST00000370025 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
PRPF38B-203ENST00000370025 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
PRPF38B-203ENST00000370025 INSRP06213 1382 aa13.2□□□□□ -0.3
PRPF38B-203ENST00000370025 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
PRPF38B-203ENST00000370025 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
PRPF38B-203ENST00000370025 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
PRPF38B-203ENST00000370025 ATAD2Q6PL18 1390 aa13.19□□□□□ -0.3
PRPF38B-203ENST00000370025 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
PRPF38B-203ENST00000370025 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRPF38B-203ENST00000370025 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
PRPF38B-203ENST00000370025 ANKRD36BQ8N2N9 1353 aa13.18□□□□□ -0.3
PRPF38B-203ENST00000370025 C3P01024 1663 aa13.18□□□□□ -0.3
PRPF38B-203ENST00000370025 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-203ENST00000370025 CGNL1Q0VF96 1302 aa13.18□□□□□ -0.3
PRPF38B-203ENST00000370025 IPO9Q96P70 1041 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-203ENST00000370025 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
PRPF38B-203ENST00000370025 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
PRPF38B-203ENST00000370025 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
PRPF38B-203ENST00000370025 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
PRPF38B-203ENST00000370025 UBE2Q2Q8WVN8 375 aa13.17□□□□□ -0.3
PRPF38B-203ENST00000370025 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
PRPF38B-203ENST00000370025 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
PRPF38B-203ENST00000370025 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
PRPF38B-203ENST00000370025 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
PRPF38B-203ENST00000370025 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
PRPF38B-203ENST00000370025 METP08581 1390 aa13.15□□□□□ -0.3
PRPF38B-203ENST00000370025 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
PRPF38B-203ENST00000370025 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
PRPF38B-203ENST00000370025 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
PRPF38B-203ENST00000370025 SIRT1Q96EB6 747 aa13.15□□□□□ -0.31
PRPF38B-203ENST00000370025 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.31
PRPF38B-203ENST00000370025 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
PRPF38B-203ENST00000370025 NSD2O96028 1365 aa13.14□□□□□ -0.31
PRPF38B-203ENST00000370025 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
PRPF38B-203ENST00000370025 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
PRPF38B-203ENST00000370025 HDGFL2Q7Z4V5 671 aaPredicted RBP13.13□□□□□ -0.31
PRPF38B-203ENST00000370025 LTKP29376 864 aa13.13□□□□□ -0.31
PRPF38B-203ENST00000370025 PLEKHH1Q9ULM0 1364 aa13.12□□□□□ -0.31
PRPF38B-203ENST00000370025 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
PRPF38B-203ENST00000370025 FAM135BQ49AJ0 1406 aa13.12□□□□□ -0.31
PRPF38B-203ENST00000370025 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
PRPF38B-203ENST00000370025 TECPR2O15040 1411 aa13.11□□□□□ -0.31
PRPF38B-203ENST00000370025 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-203ENST00000370025 ADAMTS13Q76LX8 1427 aa13.1□□□□□ -0.31
PRPF38B-203ENST00000370025 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
PRPF38B-203ENST00000370025 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
PRPF38B-203ENST00000370025 SLIT1O75093 1534 aa13.1□□□□□ -0.31
PRPF38B-203ENST00000370025 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
PRPF38B-203ENST00000370025 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
PRPF38B-203ENST00000370025 CFAP53Q96M91 514 aa13.09□□□□□ -0.31
PRPF38B-203ENST00000370025 CPS1P31327 1500 aa13.08□□□□□ -0.31
PRPF38B-203ENST00000370025 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
PRPF38B-203ENST00000370025 RIMS1Q86UR5 1692 aaKnown RBP13.07□□□□□ -0.32
PRPF38B-203ENST00000370025 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
PRPF38B-203ENST00000370025 CD163L1Q9NR16 1453 aa13.06□□□□□ -0.32
PRPF38B-203ENST00000370025 MTHFSP49914 203 aa13.06□□□□□ -0.32
PRPF38B-203ENST00000370025 MED14O60244 1454 aa13.06□□□□□ -0.32
PRPF38B-203ENST00000370025 ATP7BP35670 1465 aa13.06□□□□□ -0.32
PRPF38B-203ENST00000370025 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
PRPF38B-203ENST00000370025 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
PRPF38B-203ENST00000370025 ROBO2Q9HCK4 1378 aa13.05□□□□□ -0.32
PRPF38B-203ENST00000370025 FYB1O15117 783 aa13.05□□□□□ -0.32
PRPF38B-203ENST00000370025 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
PRPF38B-203ENST00000370025 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
PRPF38B-203ENST00000370025 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
PRPF38B-203ENST00000370025 PPIP5K1Q6PFW1 1433 aa13.03□□□□□ -0.32
PRPF38B-203ENST00000370025 NGEFQ8N5V2 710 aa13.03□□□□□ -0.32
PRPF38B-203ENST00000370025 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
PRPF38B-203ENST00000370025 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
PRPF38B-203ENST00000370025 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
PRPF38B-203ENST00000370025 DIP2AQ14689 1571 aa13.02□□□□□ -0.32
PRPF38B-203ENST00000370025 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms