RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 WIZO95785 1651 aa15.01□□□□□ -0.01
HCFC1-202ENST00000369984 DHX37Q8IY37 1157 aaKnown RBP15.01□□□□□ -0.01
HCFC1-202ENST00000369984 EVC2Q86UK5 1308 aa15.01□□□□□ -0.01
HCFC1-202ENST00000369984 G3BP1Q13283 466 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■□□□ 12.5
HCFC1-202ENST00000369984 CCDC66A2RUB6 948 aa15□□□□□ -0.01
HCFC1-202ENST00000369984 ERCC4Q92889 916 aaPredicted RBP15□□□□□ -0.01
HCFC1-202ENST00000369984 DZIP1LQ8IYY4 767 aaKnown RBP15□□□□□ -0.01
HCFC1-202ENST00000369984 SKIDA1Q1XH10 827 aa15□□□□□ -0.01
HCFC1-202ENST00000369984 BRMS1Q9HCU9 246 aa15□□□□□ -0.01
HCFC1-202ENST00000369984 C22orf23Q9BZE7 217 aa14.99□□□□□ -0.01
HCFC1-202ENST00000369984 USP47Q96K76 1375 aa14.99□□□□□ -0.01
HCFC1-202ENST00000369984 OFD1O75665 1012 aa14.99□□□□□ -0.01
HCFC1-202ENST00000369984 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.99□□□□□ -0.01
HCFC1-202ENST00000369984 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
HCFC1-202ENST00000369984 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
HCFC1-202ENST00000369984 DYDC1Q8WWB3 177 aa14.98□□□□□ -0.01
HCFC1-202ENST00000369984 ERC2O15083 957 aa14.98□□□□□ -0.01
HCFC1-202ENST00000369984 MSH5O43196 834 aa14.98□□□□□ -0.01
HCFC1-202ENST00000369984 RALYLQ86SE5 291 aaKnown RBP14.97□□□□□ -0.01
HCFC1-202ENST00000369984 LETM1O95202 739 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-202ENST00000369984 LEKR1Q6ZMV7 388 aa14.96□□□□□ -0.01
HCFC1-202ENST00000369984 RIPK4P57078 832 aa14.96□□□□□ -0.01
HCFC1-202ENST00000369984 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
HCFC1-202ENST00000369984 NFKBIBQ15653 356 aa14.96□□□□□ -0.01
HCFC1-202ENST00000369984 TSPYL1Q9H0U9 437 aa14.96□□□□□ -0.01
HCFC1-202ENST00000369984 MRE11P49959 708 aa14.96□□□□□ -0.02
HCFC1-202ENST00000369984 SDF4Q9BRK5 362 aa14.96□□□□□ -0.02
HCFC1-202ENST00000369984 XBP1P17861 261 aa14.95□□□□□ -0.02
HCFC1-202ENST00000369984 SMC2O95347 1197 aa14.95□□□□□ -0.02
HCFC1-202ENST00000369984 TRIM5Q9C035 493 aa14.95□□□□□ -0.02
HCFC1-202ENST00000369984 APAF1O14727 1248 aa14.95□□□□□ -0.02
HCFC1-202ENST00000369984 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
HCFC1-202ENST00000369984 CWC22Q9HCG8 908 aaKnown RBP14.95□□□□□ -0.02
HCFC1-202ENST00000369984 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-202ENST00000369984 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-202ENST00000369984 RNF214Q8ND24 703 aa14.94□□□□□ -0.02
HCFC1-202ENST00000369984 SYTL4Q96C24 671 aaPredicted RBP14.94□□□□□ -0.02
HCFC1-202ENST00000369984 API5Q9BZZ5 524 aaKnown RBP14.94□□□□□ -0.02
HCFC1-202ENST00000369984 CCDC27Q2M243 656 aa14.93□□□□□ -0.02
HCFC1-202ENST00000369984 SMARCE1Q969G3 411 aa14.93□□□□□ -0.02
HCFC1-202ENST00000369984 CCP110O43303 1012 aa14.93□□□□□ -0.02
HCFC1-202ENST00000369984 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
HCFC1-202ENST00000369984 FYB1O15117 783 aa14.93□□□□□ -0.02
HCFC1-202ENST00000369984 PSMA5P28066 241 aa14.93□□□□□ -0.02
HCFC1-202ENST00000369984 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
HCFC1-202ENST00000369984 AXDND1Q5T1B0 1012 aaPredicted RBP14.92□□□□□ -0.02
HCFC1-202ENST00000369984 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
HCFC1-202ENST00000369984 KINO60870 393 aaKnown RBP14.92□□□□□ -0.02
HCFC1-202ENST00000369984 DIAPH1O60610 1272 aaKnown RBP14.92□□□□□ -0.02
HCFC1-202ENST00000369984 RSPH4AQ5TD94 716 aa14.91□□□□□ -0.02
HCFC1-202ENST00000369984 TSPY26PQ9H489 355 aa14.91□□□□□ -0.02
HCFC1-202ENST00000369984 CNTROBQ8N137 903 aa14.91□□□□□ -0.02
HCFC1-202ENST00000369984 MAGEC2Q9UBF1 373 aaPredicted RBP14.91□□□□□ -0.02
HCFC1-202ENST00000369984 HSP90AB4PQ58FF6 505 aa14.91□□□□□ -0.02
HCFC1-202ENST00000369984 WASHC4Q2M389 1173 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 TRAK2O60296 914 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 BRPF1P55201 1214 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-202ENST00000369984 NEUROD6Q96NK8 337 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 KDM4AO75164 1064 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 FHOD3Q2V2M9 1422 aa14.9□□□□□ -0.02
HCFC1-202ENST00000369984 FILIP1LQ4L180 1135 aa14.89□□□□□ -0.03
HCFC1-202ENST00000369984 SPC24Q8NBT2 197 aa14.89□□□□□ -0.03
HCFC1-202ENST00000369984 KIF7Q2M1P5 1343 aa14.89□□□□□ -0.03
HCFC1-202ENST00000369984 CT47B1P0C2W7 299 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-202ENST00000369984 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
HCFC1-202ENST00000369984 TSPYL4Q9UJ04 414 aa14.89□□□□□ -0.03
HCFC1-202ENST00000369984 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-202ENST00000369984 CDC45O75419 566 aa14.88□□□□□ -0.03
HCFC1-202ENST00000369984 ERLIN2O94905 339 aa14.88□□□□□ -0.03
HCFC1-202ENST00000369984 NEFHP12036 1026 aa14.88□□□□□ -0.03
HCFC1-202ENST00000369984 SYCP1Q15431 976 aa14.88□□□□□ -0.03
HCFC1-202ENST00000369984 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
HCFC1-202ENST00000369984 CDK5RAP3Q96JB5 506 aa14.87□□□□□ -0.03
HCFC1-202ENST00000369984 SEPT7Q16181 437 aaKnown RBP14.87□□□□□ -0.03
HCFC1-202ENST00000369984 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
HCFC1-202ENST00000369984 TXLNAP40222 546 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 TAF3Q5VWG9 929 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 FMNL2Q96PY5 1086 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 RBM10P98175 930 aaKnown RBP14.86□□□□□ -0.03
HCFC1-202ENST00000369984 PSME1Q06323 249 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 SART3Q15020 963 aaKnown RBP14.86□□□□□ -0.03
HCFC1-202ENST00000369984 PANK1Q8TE04 598 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 KIAA0754O94854 1291 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 PAF1Q8N7H5 531 aa14.86□□□□□ -0.03
HCFC1-202ENST00000369984 VGFO15240 615 aaPredicted RBP14.86□□□□□ -0.03
HCFC1-202ENST00000369984 IKQ13123 557 aaPredicted RBP14.86□□□□□ -0.03
HCFC1-202ENST00000369984 ENOX2Q16206 610 aaKnown RBP14.86□□□□□ -0.03
HCFC1-202ENST00000369984 MBD3O95983 291 aa14.85□□□□□ -0.03
HCFC1-202ENST00000369984 HMGN5P82970 282 aaKnown RBP14.85□□□□□ -0.03
HCFC1-202ENST00000369984 TMEM132AQ24JP5 1023 aa14.85□□□□□ -0.03
HCFC1-202ENST00000369984 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
HCFC1-202ENST00000369984 UBTFL1P0CB47 393 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-202ENST00000369984 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-202ENST00000369984 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
HCFC1-202ENST00000369984 PDCP20941 246 aa14.84□□□□□ -0.03
HCFC1-202ENST00000369984 AIMP1Q12904 312 aaKnown RBP14.84□□□□□ -0.03
HCFC1-202ENST00000369984 AAMPQ13685 434 aa14.84□□□□□ -0.03
HCFC1-202ENST00000369984 ANKRD18AQ8IVF6 992 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms