RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 HDGFP51858 240 aaKnown RBP7.16□□□□□ -1.26
UBE3D-202ENST00000369746 XRN1Q8IZH2 1706 aaKnown RBP7.16□□□□□ -1.26
UBE3D-202ENST00000369746 ZNF692Q9BU19 519 aaPredicted RBP7.15□□□□□ -1.26
UBE3D-202ENST00000369746 NWD2Q9ULI1 1742 aa7.15□□□□□ -1.26
UBE3D-202ENST00000369746 ADGRB2O60241 1585 aa7.15□□□□□ -1.26
UBE3D-202ENST00000369746 MTUS2Q5JR59 1369 aa7.15□□□□□ -1.26
UBE3D-202ENST00000369746 EID1Q9Y6B2 187 aa7.15□□□□□ -1.26
UBE3D-202ENST00000369746 NOS1P29475 1434 aa7.14□□□□□ -1.27
UBE3D-202ENST00000369746 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.14□□□□□ -1.27
UBE3D-202ENST00000369746 NINLQ9Y2I6 1382 aa7.14□□□□□ -1.27
UBE3D-202ENST00000369746 PIK3C2BO00750 1634 aa7.14□□□□□ -1.27
UBE3D-202ENST00000369746 PCDH10Q9P2E7 1040 aa7.14□□□□□ -1.27
UBE3D-202ENST00000369746 TMEM94Q12767 1356 aa7.14□□□□□ -1.27
UBE3D-202ENST00000369746 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.14□□□□□ -1.27
UBE3D-202ENST00000369746 ASXL1Q8IXJ9 1541 aa7.14□□□□□ -1.27
UBE3D-202ENST00000369746 CADPS2Q86UW7 1296 aa7.13□□□□□ -1.27
UBE3D-202ENST00000369746 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
UBE3D-202ENST00000369746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.13□□□□□ -1.27
UBE3D-202ENST00000369746 RBM10P98175 930 aaKnown RBP7.13□□□□□ -1.27
UBE3D-202ENST00000369746 HNRNPUL2Q1KMD3 747 aaKnown RBP7.13□□□□□ -1.27
UBE3D-202ENST00000369746 ZNF326Q5BKZ1 582 aaKnown RBP7.13□□□□□ -1.27
UBE3D-202ENST00000369746 CWC22Q9HCG8 908 aaKnown RBP7.13□□□□□ -1.27
UBE3D-202ENST00000369746 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
UBE3D-202ENST00000369746 SETBP1Q9Y6X0 1596 aa7.12□□□□□ -1.27
UBE3D-202ENST00000369746 C11orf95C9JLR9 678 aaPredicted RBP7.12□□□□□ -1.27
UBE3D-202ENST00000369746 ZFYVE9O95405 1425 aa7.12□□□□□ -1.27
UBE3D-202ENST00000369746 TBX22Q9Y458 520 aa7.12□□□□□ -1.27
UBE3D-202ENST00000369746 ARID3CA6NKF2 412 aa7.11□□□□□ -1.27
UBE3D-202ENST00000369746 FOXD4L5Q5VV16 416 aaPredicted RBP7.11□□□□□ -1.27
UBE3D-202ENST00000369746 FOXD4L4Q8WXT5 416 aaPredicted RBP7.11□□□□□ -1.27
UBE3D-202ENST00000369746 FNBP4Q8N3X1 1017 aaPredicted RBP7.11□□□□□ -1.27
UBE3D-202ENST00000369746 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
UBE3D-202ENST00000369746 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.1□□□□□ -1.27
UBE3D-202ENST00000369746 SLAIN2Q9P270 581 aa7.1□□□□□ -1.27
UBE3D-202ENST00000369746 MSH5O43196 834 aa7.09□□□□□ -1.27
UBE3D-202ENST00000369746 RREB1Q92766 1687 aa7.09□□□□□ -1.27
UBE3D-202ENST00000369746 CCNB3Q8WWL7 1395 aa7.09□□□□□ -1.27
UBE3D-202ENST00000369746 RAD21O60216 631 aa7.09□□□□□ -1.27
UBE3D-202ENST00000369746 RBM25P49756 843 aaKnown RBP7.09□□□□□ -1.27
UBE3D-202ENST00000369746 SLC52A1Q9NWF4 448 aa7.09□□□□□ -1.27
UBE3D-202ENST00000369746 TRPC5Q9UL62 973 aaPredicted RBP7.09□□□□□ -1.27
UBE3D-202ENST00000369746 PNPLA6Q8IY17 1366 aa7.08□□□□□ -1.28
UBE3D-202ENST00000369746 BRPF1P55201 1214 aaPredicted RBP7.08□□□□□ -1.28
UBE3D-202ENST00000369746 CERS3Q8IU89 383 aa7.08□□□□□ -1.28
UBE3D-202ENST00000369746 ZNF526Q8TF50 670 aaPredicted RBP7.08□□□□□ -1.28
UBE3D-202ENST00000369746 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
UBE3D-202ENST00000369746 GCC2Q8IWJ2 1684 aa7.08□□□□□ -1.28
UBE3D-202ENST00000369746 LRRC59Q96AG4 307 aaKnown RBP7.08□□□□□ -1.28
UBE3D-202ENST00000369746 KCTD17Q8N5Z5 321 aa7.07□□□□□ -1.28
UBE3D-202ENST00000369746 MYOM2P54296 1465 aa7.07□□□□□ -1.28
UBE3D-202ENST00000369746 KIF1AQ12756 1690 aa7.07□□□□□ -1.28
UBE3D-202ENST00000369746 C19orf44Q9H6X5 657 aa7.07□□□□□ -1.28
UBE3D-202ENST00000369746 RBM33Q96EV2 1170 aaKnown RBP7.06□□□□□ -1.28
UBE3D-202ENST00000369746 WASHC2CQ9Y4E1 1318 aa7.06□□□□□ -1.28
UBE3D-202ENST00000369746 TMEM131LA2VDJ0 1609 aa7.06□□□□□ -1.28
UBE3D-202ENST00000369746 ONECUT3O60422 494 aaPredicted RBP7.06□□□□□ -1.28
UBE3D-202ENST00000369746 PIAS4Q8N2W9 510 aaPredicted RBP7.06□□□□□ -1.28
UBE3D-202ENST00000369746 MAP3K5Q99683 1374 aa7.05□□□□□ -1.28
UBE3D-202ENST00000369746 MST1RQ04912 1400 aa7.05□□□□□ -1.28
UBE3D-202ENST00000369746 USP35Q9P2H5 1018 aa7.05□□□□□ -1.28
UBE3D-202ENST00000369746 AFF2P51816 1311 aa7.05□□□□□ -1.28
UBE3D-202ENST00000369746 PPP1R15AO75807 674 aaPredicted RBP7.04□□□□□ -1.28
UBE3D-202ENST00000369746 MEX3CQ5U5Q3 659 aaKnown RBP7.04□□□□□ -1.28
UBE3D-202ENST00000369746 FAM177A1Q8N128 213 aaPredicted RBP7.04□□□□□ -1.28
UBE3D-202ENST00000369746 CNPY4Q8N129 248 aa7.04□□□□□ -1.28
UBE3D-202ENST00000369746 KANK1Q14678 1352 aa7.04□□□□□ -1.28
UBE3D-202ENST00000369746 ADGRL3Q9HAR2 1447 aa7.04□□□□□ -1.28
UBE3D-202ENST00000369746 PRDM16Q9HAZ2 1276 aa7.04□□□□□ -1.28
UBE3D-202ENST00000369746 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
UBE3D-202ENST00000369746 PSMD1Q99460 953 aa7.03□□□□□ -1.28
UBE3D-202ENST00000369746 COL24A1Q17RW2 1714 aa7.03□□□□□ -1.28
UBE3D-202ENST00000369746 CDC42BPGQ6DT37 1551 aa7.03□□□□□ -1.28
UBE3D-202ENST00000369746 SLIT2O94813 1529 aa7.03□□□□□ -1.28
UBE3D-202ENST00000369746 RRBP1Q9P2E9 1410 aaKnown RBP7.03□□□□□ -1.28
UBE3D-202ENST00000369746 DEKP35659 375 aaKnown RBP7.03□□□□□ -1.28
UBE3D-202ENST00000369746 TNS1Q9HBL0 1735 aaKnown RBP7.02□□□□□ -1.29
UBE3D-202ENST00000369746 DCAF8L1A6NGE4 600 aa7.02□□□□□ -1.29
UBE3D-202ENST00000369746 TXNDC2Q86VQ3 553 aa7.02□□□□□ -1.29
UBE3D-202ENST00000369746 ABCC5O15440 1437 aa7.02□□□□□ -1.29
UBE3D-202ENST00000369746 PROSER2Q86WR7 435 aaPredicted RBP7.02□□□□□ -1.29
UBE3D-202ENST00000369746 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.02□□□□□ -1.29
UBE3D-202ENST00000369746 ADGRL2O95490 1459 aa7.02□□□□□ -1.29
UBE3D-202ENST00000369746 LRPPRCP42704 1394 aaKnown RBP7.02□□□□□ -1.29
UBE3D-202ENST00000369746 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
UBE3D-202ENST00000369746 CFDP1Q9UEE9 299 aaPredicted RBP7.01□□□□□ -1.29
UBE3D-202ENST00000369746 NALCNQ8IZF0 1738 aa7.01□□□□□ -1.29
UBE3D-202ENST00000369746 CLSTN1O94985 981 aa7□□□□□ -1.29
UBE3D-202ENST00000369746 THSD7AQ9UPZ6 1657 aa7□□□□□ -1.29
UBE3D-202ENST00000369746 NCLP19338 710 aaKnown RBP7□□□□□ -1.29
UBE3D-202ENST00000369746 ADAMTS13Q76LX8 1427 aa7□□□□□ -1.29
UBE3D-202ENST00000369746 AATKQ6ZMQ8 1374 aa7□□□□□ -1.29
UBE3D-202ENST00000369746 MYOM3Q5VTT5 1437 aa7□□□□□ -1.29
UBE3D-202ENST00000369746 PPM1GO15355 546 aaPredicted RBP6.99□□□□□ -1.29
UBE3D-202ENST00000369746 QTRT2Q9H974 415 aaKnown RBP6.99□□□□□ -1.29
UBE3D-202ENST00000369746 GLI3P10071 1580 aa6.99□□□□□ -1.29
UBE3D-202ENST00000369746 ZMYND15Q9H091 742 aa6.99□□□□□ -1.29
UBE3D-202ENST00000369746 DIEXFQ68CQ4 756 aaKnown RBP6.99□□□□□ -1.29
UBE3D-202ENST00000369746 GGT6Q6P531 493 aa6.99□□□□□ -1.29
UBE3D-202ENST00000369746 KNDC1Q76NI1 1749 aa6.98□□□□□ -1.29
UBE3D-202ENST00000369746 LTKP29376 864 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms