RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CCDC61Q9Y6R9 512 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 KIF16BQ96L93 1317 aa6.71□□□□□ -1.34
SMNDC1-202ENST00000369603 KDM5DQ9BY66 1539 aa6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 HMMRO75330 724 aa6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 DDX19BQ9UMR2 479 aa6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 CT47B1P0C2W7 299 aaPredicted RBP6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 CSB-PGBD3P0DP91 1061 aa6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 ANP32BQ92688 251 aaKnown RBP6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 ARXQ96QS3 562 aa6.7□□□□□ -1.34
SMNDC1-202ENST00000369603 PSME1Q06323 249 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 DZIP1LQ8IYY4 767 aaKnown RBP6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 PARD3Q8TEW0 1356 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 COL17A1Q9UMD9 1497 aaPredicted RBP6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 OS9Q13438 667 aaPredicted RBP6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 PDE3AQ14432 1141 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 ANKLE2Q86XL3 938 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 API5Q9BZZ5 524 aaKnown RBP6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 PLXNC1O60486 1568 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 ASXL1Q8IXJ9 1541 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 SPATA31E1Q6ZUB1 1445 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 LTV1Q96GA3 475 aaPredicted RBP6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
SMNDC1-202ENST00000369603 GOLGA6L22H0YM25 854 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 MSH5O43196 834 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 TNRQ92752 1358 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 A0A0G2JS52 829 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 NUDT16Q96DE0 195 aaKnown RBP6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 FCHSD2O94868 740 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 NLRP6P59044 892 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 FAM161AQ3B820 660 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 ATP10AO60312 1499 aa6.68□□□□□ -1.34
SMNDC1-202ENST00000369603 HMOX1P09601 288 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 PRKAR2BP31323 418 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 GLIPR1L2Q4G1C9 344 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 AMER1Q5JTC6 1135 aaPredicted RBP6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 ERCC6L2Q5T890 1561 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 MLH3Q9UHC1 1453 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 PDE4AP27815 886 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 LRRIQ1Q96JM4 1722 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 SLFN5Q08AF3 891 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 HSCBQ8IWL3 235 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 SLC26A8Q96RN1 970 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 WASLO00401 505 aaPredicted RBP6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 C1orf141Q5JVX7 400 aa6.67□□□□□ -1.34
SMNDC1-202ENST00000369603 ANKRD36BQ8N2N9 1353 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 NPC1L1Q9UHC9 1359 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 ZNF428Q96B54 188 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 CROCC2H7BZ55 1655 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 CLASP1Q7Z460 1538 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 ELL2O00472 640 aaPredicted RBP6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 TEFQ10587 303 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 WAPLQ7Z5K2 1190 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 GAS2L2Q8NHY3 880 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 ABCC11Q96J66 1382 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 ATF3P18847 181 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 MCCP23508 829 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 WWC1Q8IX03 1113 aa6.66□□□□□ -1.34
SMNDC1-202ENST00000369603 TRPM2O94759 1503 aa6.65□□□□□ -1.34
SMNDC1-202ENST00000369603 PER1O15534 1290 aaPredicted RBP6.65□□□□□ -1.34
SMNDC1-202ENST00000369603 RIMS2Q9UQ26 1411 aa6.65□□□□□ -1.34
SMNDC1-202ENST00000369603 HSP90AB1P08238 724 aaKnown RBP6.65□□□□□ -1.34
SMNDC1-202ENST00000369603 SLC4A10Q6U841 1118 aa6.65□□□□□ -1.34
SMNDC1-202ENST00000369603 ABTB2Q8N961 1025 aa6.65□□□□□ -1.34
SMNDC1-202ENST00000369603 PIK3C2GO75747 1445 aa6.65□□□□□ -1.35
SMNDC1-202ENST00000369603 ZFYVE16Q7Z3T8 1539 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 IQGAP3Q86VI3 1631 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 EXOSC9Q06265 439 aaKnown RBP6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 PTPRTO14522 1441 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 SHROOM2Q13796 1616 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 NPATQ14207 1427 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 NCLP19338 710 aaKnown RBP6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 TMPOP42166 694 aaKnown RBP6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 PANK1Q8TE04 598 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 TSPYL4Q9UJ04 414 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 MAGI2Q86UL8 1455 aa6.64□□□□□ -1.35
SMNDC1-202ENST00000369603 INSRP06213 1382 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 UNC13BO14795 1591 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 POLR3AO14802 1390 aaPredicted RBP6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 SBNO2Q9Y2G9 1366 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 NKTRP30414 1462 aaKnown RBP6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 CDC42BPBQ9Y5S2 1711 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 AMOTL2Q9Y2J4 779 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 KDM5CP41229 1560 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 SULT6B1Q6IMI4 303 aa6.63□□□□□ -1.35
SMNDC1-202ENST00000369603 HECW2Q9P2P5 1572 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 TET3O43151 1660 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 APBB1O00213 710 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 ZMYM3Q14202 1370 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 MYOM2P54296 1465 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 BCAR3O75815 825 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 ANKRD45Q5TZF3 282 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 YTHDC2Q9H6S0 1430 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 TWISTNBQ3B726 338 aaPredicted RBP6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 AEBP2Q6ZN18 517 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms