RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ATP10AO60312 1499 aa11.41□□□□□ -0.58
THBS3-201ENST00000368378 POGKQ9P215 609 aa11.41□□□□□ -0.58
THBS3-201ENST00000368378 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
THBS3-201ENST00000368378 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
THBS3-201ENST00000368378 MFAP1P55081 439 aaKnown RBP11.4□□□□□ -0.58
THBS3-201ENST00000368378 LAMC1P11047 1609 aa11.4□□□□□ -0.58
THBS3-201ENST00000368378 KANK1Q14678 1352 aa11.4□□□□□ -0.58
THBS3-201ENST00000368378 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
THBS3-201ENST00000368378 CFAP65Q6ZU64 1925 aaKnown RBP11.4□□□□□ -0.59
THBS3-201ENST00000368378 RLBP1P12271 317 aa11.4□□□□□ -0.59
THBS3-201ENST00000368378 MADDQ8WXG6 1647 aa11.39□□□□□ -0.59
THBS3-201ENST00000368378 MTHFSP49914 203 aa11.39□□□□□ -0.59
THBS3-201ENST00000368378 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
THBS3-201ENST00000368378 TCP11L2Q8N4U5 519 aa11.39□□□□□ -0.59
THBS3-201ENST00000368378 ABCC1P33527 1531 aa11.39□□□□□ -0.59
THBS3-201ENST00000368378 EIF3AQ14152 1382 aaKnown RBP11.38□□□□□ -0.59
THBS3-201ENST00000368378 FGD1P98174 961 aa11.38□□□□□ -0.59
THBS3-201ENST00000368378 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
THBS3-201ENST00000368378 ASXL1Q8IXJ9 1541 aa11.38□□□□□ -0.59
THBS3-201ENST00000368378 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
THBS3-201ENST00000368378 RTEL1-TNFRSF6BF6WH68 1400 aa11.38□□□□□ -0.59
THBS3-201ENST00000368378 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
THBS3-201ENST00000368378 RNF17Q9BXT8 1623 aaKnown RBP11.37□□□□□ -0.59
THBS3-201ENST00000368378 GGNBP2Q9H3C7 697 aa11.37□□□□□ -0.59
THBS3-201ENST00000368378 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
THBS3-201ENST00000368378 KDM2BQ8NHM5 1336 aa11.37□□□□□ -0.59
THBS3-201ENST00000368378 ZNF521Q96K83 1311 aa11.37□□□□□ -0.59
THBS3-201ENST00000368378 CEBPAP49715 358 aaPredicted RBP11.36□□□□□ -0.59
THBS3-201ENST00000368378 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
THBS3-201ENST00000368378 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
THBS3-201ENST00000368378 ESF1Q9H501 851 aaKnown RBP11.36□□□□□ -0.59
THBS3-201ENST00000368378 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
THBS3-201ENST00000368378 ABCA9Q8IUA7 1624 aa11.36□□□□□ -0.59
THBS3-201ENST00000368378 SRPK2P78362 688 aaKnown RBP11.35□□□□□ -0.59
THBS3-201ENST00000368378 IQGAP1P46940 1657 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 TRPM2O94759 1503 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 E9PSI1 815 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 APBB1O00213 710 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 SOX12O15370 315 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
THBS3-201ENST00000368378 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
THBS3-201ENST00000368378 ZFYVE16Q7Z3T8 1539 aa11.34□□□□□ -0.59
THBS3-201ENST00000368378 PDZRN3Q9UPQ7 1066 aa11.34□□□□□ -0.59
THBS3-201ENST00000368378 KIF13AQ9H1H9 1805 aa11.34□□□□□ -0.59
THBS3-201ENST00000368378 SYNMO15061 1565 aa11.34□□□□□ -0.59
THBS3-201ENST00000368378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.33□□□□□ -0.6
THBS3-201ENST00000368378 SMC4Q9NTJ3 1288 aa11.33□□□□□ -0.6
THBS3-201ENST00000368378 INSRP06213 1382 aa11.33□□□□□ -0.6
THBS3-201ENST00000368378 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
THBS3-201ENST00000368378 PIK3C2GO75747 1445 aa11.33□□□□□ -0.6
THBS3-201ENST00000368378 CEP152O94986 1710 aa11.33□□□□□ -0.6
THBS3-201ENST00000368378 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
THBS3-201ENST00000368378 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
THBS3-201ENST00000368378 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
THBS3-201ENST00000368378 KDM5AP29375 1690 aaKnown RBP11.32□□□□□ -0.6
THBS3-201ENST00000368378 PTPRTO14522 1441 aa11.32□□□□□ -0.6
THBS3-201ENST00000368378 ATP7AQ04656 1500 aa11.31□□□□□ -0.6
THBS3-201ENST00000368378 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
THBS3-201ENST00000368378 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
THBS3-201ENST00000368378 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
THBS3-201ENST00000368378 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
THBS3-201ENST00000368378 MYOM1P52179 1685 aa11.31□□□□□ -0.6
THBS3-201ENST00000368378 NOS1P29475 1434 aa11.31□□□□□ -0.6
THBS3-201ENST00000368378 NSD3Q9BZ95 1437 aa11.3□□□□□ -0.6
THBS3-201ENST00000368378 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
THBS3-201ENST00000368378 LNPKQ9C0E8 428 aa11.3□□□□□ -0.6
THBS3-201ENST00000368378 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
THBS3-201ENST00000368378 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
THBS3-201ENST00000368378 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
THBS3-201ENST00000368378 HMOX1P09601 288 aa11.29□□□□□ -0.6
THBS3-201ENST00000368378 BECN1Q14457 450 aa11.29□□□□□ -0.6
THBS3-201ENST00000368378 TRMT2AQ8IZ69 625 aaKnown RBP11.29□□□□□ -0.6
THBS3-201ENST00000368378 TET3O43151 1660 aa11.29□□□□□ -0.6
THBS3-201ENST00000368378 ABCA6Q8N139 1617 aa11.28□□□□□ -0.6
THBS3-201ENST00000368378 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
THBS3-201ENST00000368378 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
THBS3-201ENST00000368378 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
THBS3-201ENST00000368378 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
THBS3-201ENST00000368378 ZNF518AQ6AHZ1 1483 aa11.27□□□□□ -0.61
THBS3-201ENST00000368378 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
THBS3-201ENST00000368378 CGNL1Q0VF96 1302 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 MAPK8IP3Q9UPT6 1336 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 MAP3K4Q9Y6R4 1608 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 RUNDC1Q96C34 613 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 KIF1BO60333 1816 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 TBC1D2Q9BYX2 928 aa11.26□□□□□ -0.61
THBS3-201ENST00000368378 NEO1Q92859 1461 aa11.25□□□□□ -0.61
THBS3-201ENST00000368378 CFAP74Q9C0B2 1584 aa11.25□□□□□ -0.61
THBS3-201ENST00000368378 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
THBS3-201ENST00000368378 RIPK4P57078 832 aa11.24□□□□□ -0.61
THBS3-201ENST00000368378 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
THBS3-201ENST00000368378 DEPDC5O75140 1603 aa11.24□□□□□ -0.61
THBS3-201ENST00000368378 MROH2AA6NES4 1674 aa11.24□□□□□ -0.61
THBS3-201ENST00000368378 USP19O94966 1318 aa11.24□□□□□ -0.61
THBS3-201ENST00000368378 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
THBS3-201ENST00000368378 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
THBS3-201ENST00000368378 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms