RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 J3QL48 77 aa9.53□□□□□ -0.88
ECHDC1-201ENST00000368287 FECHP22830 423 aa9.53□□□□□ -0.88
ECHDC1-201ENST00000368287 KIFC2Q96AC6 838 aa9.53□□□□□ -0.88
ECHDC1-201ENST00000368287 MRGPRX2Q96LB1 330 aa9.53□□□□□ -0.88
ECHDC1-201ENST00000368287 FAM181BA6NEQ2 426 aa9.52□□□□□ -0.89
ECHDC1-201ENST00000368287 GCGRP47871 477 aa9.52□□□□□ -0.89
ECHDC1-201ENST00000368287 RNF19BQ6ZMZ0 732 aa9.51□□□□□ -0.89
ECHDC1-201ENST00000368287 SULF1Q8IWU6 871 aa9.51□□□□□ -0.89
ECHDC1-201ENST00000368287 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-201ENST00000368287 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
ECHDC1-201ENST00000368287 HPS1Q92902 700 aa9.49□□□□□ -0.89
ECHDC1-201ENST00000368287 SEMA3EO15041 775 aa9.48□□□□□ -0.89
ECHDC1-201ENST00000368287 GRIPAP1Q4V328 841 aa9.48□□□□□ -0.89
ECHDC1-201ENST00000368287 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
ECHDC1-201ENST00000368287 GNPATO15228 680 aa9.47□□□□□ -0.89
ECHDC1-201ENST00000368287 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
ECHDC1-201ENST00000368287 Q3C1V9 767 aa9.46□□□□□ -0.9
ECHDC1-201ENST00000368287 P3H3Q8IVL6 736 aa9.46□□□□□ -0.9
ECHDC1-201ENST00000368287 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.9
ECHDC1-201ENST00000368287 MMP16P51512 607 aa9.45□□□□□ -0.9
ECHDC1-201ENST00000368287 RBM26Q5T8P6 1007 aaKnown RBP9.43□□□□□ -0.9
ECHDC1-201ENST00000368287 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
ECHDC1-201ENST00000368287 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-201ENST00000368287 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
ECHDC1-201ENST00000368287 ZSCAN1Q8NBB4 408 aa9.42□□□□□ -0.9
ECHDC1-201ENST00000368287 GMPRP36959 345 aa9.41□□□□□ -0.9
ECHDC1-201ENST00000368287 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-201ENST00000368287 IRF7Q92985 503 aa9.4□□□□□ -0.9
ECHDC1-201ENST00000368287 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-201ENST00000368287 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-201ENST00000368287 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
ECHDC1-201ENST00000368287 WNT7BP56706 349 aa9.39□□□□□ -0.91
ECHDC1-201ENST00000368287 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
ECHDC1-201ENST00000368287 SKOR1P84550 965 aa9.38□□□□□ -0.91
ECHDC1-201ENST00000368287 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
ECHDC1-201ENST00000368287 LOC100996750A0A140TA64 210 aa9.37□□□□□ -0.91
ECHDC1-201ENST00000368287 NPAS3Q8IXF0 933 aa9.37□□□□□ -0.91
ECHDC1-201ENST00000368287 KRTAP4-6Q9BYQ5 205 aa9.37□□□□□ -0.91
ECHDC1-201ENST00000368287 GPR37O15354 613 aa9.36□□□□□ -0.91
ECHDC1-201ENST00000368287 BMP1P13497 986 aa9.36□□□□□ -0.91
ECHDC1-201ENST00000368287 LORP23490 312 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-201ENST00000368287 VEGFBP49765 207 aa9.35□□□□□ -0.91
ECHDC1-201ENST00000368287 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-201ENST00000368287 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.91
ECHDC1-201ENST00000368287 H3BM21 787 aa9.33□□□□□ -0.92
ECHDC1-201ENST00000368287 CAPN5O15484 640 aaPredicted RBP9.33□□□□□ -0.92
ECHDC1-201ENST00000368287 KDM4AO75164 1064 aa9.33□□□□□ -0.92
ECHDC1-201ENST00000368287 WASF2Q9Y6W5 498 aa9.33□□□□□ -0.92
ECHDC1-201ENST00000368287 CD46P15529 392 aa9.32□□□□□ -0.92
ECHDC1-201ENST00000368287 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
ECHDC1-201ENST00000368287 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
ECHDC1-201ENST00000368287 HLA-CQ95604 372 aa9.29□□□□□ -0.92
ECHDC1-201ENST00000368287 SIAH2O43255 324 aa9.28□□□□□ -0.92
ECHDC1-201ENST00000368287 JUNDP17535 347 aa9.28□□□□□ -0.92
ECHDC1-201ENST00000368287 USP46P62068 366 aa9.28□□□□□ -0.92
ECHDC1-201ENST00000368287 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
ECHDC1-201ENST00000368287 HOXA2O43364 376 aa9.25□□□□□ -0.93
ECHDC1-201ENST00000368287 GPIHBP1Q8IV16 184 aa9.25□□□□□ -0.93
ECHDC1-201ENST00000368287 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
ECHDC1-201ENST00000368287 SUZ12Q15022 739 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-201ENST00000368287 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-201ENST00000368287 GUCA2AQ02747 115 aa9.22□□□□□ -0.93
ECHDC1-201ENST00000368287 SH3BP2P78314 561 aa9.21□□□□□ -0.94
ECHDC1-201ENST00000368287 SYMPKQ92797 1274 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-201ENST00000368287 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
ECHDC1-201ENST00000368287 MDM2Q00987 491 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-201ENST00000368287 SCARF1Q14162 830 aa9.19□□□□□ -0.94
ECHDC1-201ENST00000368287 TLL2Q9Y6L7 1015 aa9.19□□□□□ -0.94
ECHDC1-201ENST00000368287 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-201ENST00000368287 MAP2K5Q13163 448 aa9.17□□□□□ -0.94
ECHDC1-201ENST00000368287 NNTQ13423 1086 aa9.17□□□□□ -0.94
ECHDC1-201ENST00000368287 PURBQ96QR8 312 aaKnown RBP9.17□□□□□ -0.94
ECHDC1-201ENST00000368287 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
ECHDC1-201ENST00000368287 CCNYL3P0C7X3 344 aa9.16□□□□□ -0.94
ECHDC1-201ENST00000368287 VSIG8P0DPA2 414 aa9.16□□□□□ -0.94
ECHDC1-201ENST00000368287 MS4A1P11836 297 aa9.16□□□□□ -0.94
ECHDC1-201ENST00000368287 SOBPA7XYQ1 873 aa9.15□□□□□ -0.94
ECHDC1-201ENST00000368287 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
ECHDC1-201ENST00000368287 KCTD17Q8N5Z5 321 aa9.15□□□□□ -0.94
ECHDC1-201ENST00000368287 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
ECHDC1-201ENST00000368287 KCNMA1Q12791 1236 aa9.14□□□□□ -0.95
ECHDC1-201ENST00000368287 NUTM1Q86Y26 1132 aa9.14□□□□□ -0.95
ECHDC1-201ENST00000368287 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
ECHDC1-201ENST00000368287 ADH1CP00326 375 aa9.13□□□□□ -0.95
ECHDC1-201ENST00000368287 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-201ENST00000368287 TIMP2P16035 220 aa9.12□□□□□ -0.95
ECHDC1-201ENST00000368287 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-201ENST00000368287 BAP1Q92560 729 aa9.12□□□□□ -0.95
ECHDC1-201ENST00000368287 IRF6O14896 467 aa9.11□□□□□ -0.95
ECHDC1-201ENST00000368287 FDX1P10109 184 aa9.11□□□□□ -0.95
ECHDC1-201ENST00000368287 PTPRNQ16849 979 aa9.11□□□□□ -0.95
ECHDC1-201ENST00000368287 MPNDQ8N594 471 aa9.11□□□□□ -0.95
ECHDC1-201ENST00000368287 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
ECHDC1-201ENST00000368287 EVA1BQ9NVM1 165 aa9.1□□□□□ -0.95
ECHDC1-201ENST00000368287 MAN1A2O60476 641 aa9.09□□□□□ -0.95
ECHDC1-201ENST00000368287 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
ECHDC1-201ENST00000368287 CLCN1P35523 988 aa9.08□□□□□ -0.96
ECHDC1-201ENST00000368287 KCNH2Q12809 1159 aa9.08□□□□□ -0.96
ECHDC1-201ENST00000368287 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
ECHDC1-201ENST00000368287 FAM217BQ9NTX9 383 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms