RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 SMPD1P17405 629 aa12.94□□□□□ -0.34
PTPRC-202ENST00000367364 WNT7AO00755 349 aa12.93□□□□□ -0.34
PTPRC-202ENST00000367364 SULF1Q8IWU6 871 aa12.93□□□□□ -0.34
PTPRC-202ENST00000367364 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
PTPRC-202ENST00000367364 LCE2CQ5TA81 110 aa12.92□□□□□ -0.34
PTPRC-202ENST00000367364 TRIM32Q13049 653 aa12.9□□□□□ -0.34
PTPRC-202ENST00000367364 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
PTPRC-202ENST00000367364 WIPF1O43516 503 aa12.89□□□□□ -0.35
PTPRC-202ENST00000367364 ATP13A2Q9NQ11 1180 aa12.89□□□□□ -0.35
PTPRC-202ENST00000367364 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
PTPRC-202ENST00000367364 MMP16P51512 607 aa12.88□□□□□ -0.35
PTPRC-202ENST00000367364 MRGPRX2Q96LB1 330 aa12.88□□□□□ -0.35
PTPRC-202ENST00000367364 J3QL48 77 aa12.87□□□□□ -0.35
PTPRC-202ENST00000367364 SMYD5Q6GMV2 418 aa12.87□□□□□ -0.35
PTPRC-202ENST00000367364 STK17AQ9UEE5 414 aa12.84□□□□□ -0.35
PTPRC-202ENST00000367364 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
PTPRC-202ENST00000367364 Q3C1V9 767 aa12.82□□□□□ -0.36
PTPRC-202ENST00000367364 HPS1Q92902 700 aa12.82□□□□□ -0.36
PTPRC-202ENST00000367364 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
PTPRC-202ENST00000367364 DXOO77932 396 aaKnown RBP12.81□□□□□ -0.36
PTPRC-202ENST00000367364 CD46P15529 392 aa12.81□□□□□ -0.36
PTPRC-202ENST00000367364 TERTO14746 1132 aaKnown RBP12.8□□□□□ -0.36
PTPRC-202ENST00000367364 INSM1Q01101 510 aaPredicted RBP12.79□□□□□ -0.36
PTPRC-202ENST00000367364 SKOR1P84550 965 aa12.78□□□□□ -0.36
PTPRC-202ENST00000367364 HLA-CQ95604 372 aa12.78□□□□□ -0.36
PTPRC-202ENST00000367364 USB1Q9BQ65 265 aaKnown RBP12.78□□□□□ -0.36
PTPRC-202ENST00000367364 SENP2Q9HC62 589 aa12.78□□□□□ -0.36
PTPRC-202ENST00000367364 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
PTPRC-202ENST00000367364 REPIN1Q9BWE0 567 aaKnown RBP12.76□□□□□ -0.37
PTPRC-202ENST00000367364 KDM4AO75164 1064 aa12.74□□□□□ -0.37
PTPRC-202ENST00000367364 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
PTPRC-202ENST00000367364 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
PTPRC-202ENST00000367364 WNT7BP56706 349 aa12.71□□□□□ -0.37
PTPRC-202ENST00000367364 KIFC2Q96AC6 838 aa12.71□□□□□ -0.37
PTPRC-202ENST00000367364 HOXA2O43364 376 aa12.68□□□□□ -0.38
PTPRC-202ENST00000367364 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
PTPRC-202ENST00000367364 USP46P62068 366 aa12.66□□□□□ -0.38
PTPRC-202ENST00000367364 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
PTPRC-202ENST00000367364 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
PTPRC-202ENST00000367364 JUNDP17535 347 aa12.64□□□□□ -0.39
PTPRC-202ENST00000367364 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
PTPRC-202ENST00000367364 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
PTPRC-202ENST00000367364 SIAH2O43255 324 aa12.63□□□□□ -0.39
PTPRC-202ENST00000367364 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
PTPRC-202ENST00000367364 TRIM46Q7Z4K8 759 aa12.62□□□□□ -0.39
PTPRC-202ENST00000367364 IRF6O14896 467 aa12.61□□□□□ -0.39
PTPRC-202ENST00000367364 BMP1P13497 986 aa12.61□□□□□ -0.39
PTPRC-202ENST00000367364 LORP23490 312 aaPredicted RBP12.6□□□□□ -0.39
PTPRC-202ENST00000367364 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
PTPRC-202ENST00000367364 GMPRP36959 345 aa12.58□□□□□ -0.4
PTPRC-202ENST00000367364 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
PTPRC-202ENST00000367364 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
PTPRC-202ENST00000367364 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
PTPRC-202ENST00000367364 CAPN5O15484 640 aaPredicted RBP12.55□□□□□ -0.4
PTPRC-202ENST00000367364 RETREG3Q86VR2 466 aa12.55□□□□□ -0.4
PTPRC-202ENST00000367364 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
PTPRC-202ENST00000367364 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
PTPRC-202ENST00000367364 VEGFBP49765 207 aa12.53□□□□□ -0.4
PTPRC-202ENST00000367364 SH3BP2P78314 561 aa12.53□□□□□ -0.4
PTPRC-202ENST00000367364 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
PTPRC-202ENST00000367364 NPAS3Q8IXF0 933 aa12.52□□□□□ -0.41
PTPRC-202ENST00000367364 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
PTPRC-202ENST00000367364 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.41
PTPRC-202ENST00000367364 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
PTPRC-202ENST00000367364 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
PTPRC-202ENST00000367364 H3BM21 787 aa12.5□□□□□ -0.41
PTPRC-202ENST00000367364 ZSCAN1Q8NBB4 408 aa12.5□□□□□ -0.41
PTPRC-202ENST00000367364 IRF7Q92985 503 aa12.5□□□□□ -0.41
PTPRC-202ENST00000367364 ERBB4Q15303 1308 aa12.49□□□□□ -0.41
PTPRC-202ENST00000367364 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
PTPRC-202ENST00000367364 CCNYL3P0C7X3 344 aa12.47□□□□□ -0.41
PTPRC-202ENST00000367364 CLCN1P35523 988 aa12.47□□□□□ -0.41
PTPRC-202ENST00000367364 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
PTPRC-202ENST00000367364 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
PTPRC-202ENST00000367364 TLL2Q9Y6L7 1015 aa12.47□□□□□ -0.41
PTPRC-202ENST00000367364 FDX1P10109 184 aa12.46□□□□□ -0.41
PTPRC-202ENST00000367364 MS4A1P11836 297 aa12.46□□□□□ -0.41
PTPRC-202ENST00000367364 UNC93B1Q9H1C4 597 aa12.45□□□□□ -0.42
PTPRC-202ENST00000367364 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
PTPRC-202ENST00000367364 PTPRNQ16849 979 aa12.43□□□□□ -0.42
PTPRC-202ENST00000367364 LINC01559Q495D7 138 aa12.43□□□□□ -0.42
PTPRC-202ENST00000367364 BAP1Q92560 729 aa12.42□□□□□ -0.42
PTPRC-202ENST00000367364 EVA1BQ9NVM1 165 aa12.42□□□□□ -0.42
PTPRC-202ENST00000367364 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
PTPRC-202ENST00000367364 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
PTPRC-202ENST00000367364 NNTQ13423 1086 aa12.39□□□□□ -0.43
PTPRC-202ENST00000367364 NDUFV2P19404 249 aa12.38□□□□□ -0.43
PTPRC-202ENST00000367364 MRPL14Q6P1L8 145 aaKnown RBP12.38□□□□□ -0.43
PTPRC-202ENST00000367364 ZNF511Q8NB15 262 aa12.38□□□□□ -0.43
PTPRC-202ENST00000367364 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
PTPRC-202ENST00000367364 TIMP2P16035 220 aa12.37□□□□□ -0.43
PTPRC-202ENST00000367364 MPNDQ8N594 471 aa12.37□□□□□ -0.43
PTPRC-202ENST00000367364 VARSP26640 1264 aaKnown RBP12.36□□□□□ -0.43
PTPRC-202ENST00000367364 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
PTPRC-202ENST00000367364 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
PTPRC-202ENST00000367364 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
PTPRC-202ENST00000367364 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
PTPRC-202ENST00000367364 LOC100996750A0A140TA64 210 aa12.34□□□□□ -0.43
PTPRC-202ENST00000367364 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
PTPRC-202ENST00000367364 KLF16Q9BXK1 252 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms