RNA–Protein interactions for RNA: ENST00000367064.7

CD55-204, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD55, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-204ENST00000367064 NPC1L1Q9UHC9 1359 aa21.39■■□□□ 1.02
CD55-204ENST00000367064 STK26Q9P289 416 aa21.39■■□□□ 1.01
CD55-204ENST00000367064 INSRP06213 1382 aa21.39■■□□□ 1.01
CD55-204ENST00000367064 SBNO2Q9Y2G9 1366 aa21.39■■□□□ 1.01
CD55-204ENST00000367064 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
CD55-204ENST00000367064 PLEKHH1Q9ULM0 1364 aa21.37■■□□□ 1.01
CD55-204ENST00000367064 ZFYVE9O95405 1425 aa21.37■■□□□ 1.01
CD55-204ENST00000367064 SPATA31D1Q6ZQQ2 1576 aa21.37■■□□□ 1.01
CD55-204ENST00000367064 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
CD55-204ENST00000367064 IL27Q8NEV9 243 aa21.34■■□□□ 1.01
CD55-204ENST00000367064 MORC1Q86VD1 984 aa21.33■■□□□ 1
CD55-204ENST00000367064 APAF1O14727 1248 aa21.32■■□□□ 1
CD55-204ENST00000367064 MLECQ14165 292 aa21.32■■□□□ 1
CD55-204ENST00000367064 CABP2Q9NPB3 220 aa21.32■■□□□ 1
CD55-204ENST00000367064 STAG3Q9UJ98 1225 aa21.31■■□□□ 1
CD55-204ENST00000367064 RTN4Q9NQC3 1192 aaKnown RBP21.31■■□□□ 1
CD55-204ENST00000367064 EVC2Q86UK5 1308 aa21.3■■□□□ 1
CD55-204ENST00000367064 GOLGA2Q08379 1002 aa21.3■■□□□ 1
CD55-204ENST00000367064 DUSP27Q5VZP5 1158 aa21.28■■□□□ 1
CD55-204ENST00000367064 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.27■■□□□ 1
CD55-204ENST00000367064 ARHGEF28Q8N1W1 1705 aaKnown RBP21.27■■□□□ 1
CD55-204ENST00000367064 ZNF521Q96K83 1311 aa21.26■□□□□ 0.99
CD55-204ENST00000367064 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
CD55-204ENST00000367064 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
CD55-204ENST00000367064 CRBNQ96SW2 442 aa21.25■□□□□ 0.99
CD55-204ENST00000367064 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
CD55-204ENST00000367064 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
CD55-204ENST00000367064 C20orf194Q5TEA3 1177 aa21.24■□□□□ 0.99
CD55-204ENST00000367064 MINK1Q8N4C8 1332 aaPredicted RBP21.24■□□□□ 0.99
CD55-204ENST00000367064 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
CD55-204ENST00000367064 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
CD55-204ENST00000367064 PRAM1Q96QH2 718 aa21.22■□□□□ 0.99
CD55-204ENST00000367064 POGKQ9P215 609 aa21.22■□□□□ 0.99
CD55-204ENST00000367064 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
CD55-204ENST00000367064 UBE2Q2Q8WVN8 375 aa21.21■□□□□ 0.99
CD55-204ENST00000367064 A2ML1A8K2U0 1454 aa21.21■□□□□ 0.99
CD55-204ENST00000367064 MTHFSP49914 203 aa21.21■□□□□ 0.99
CD55-204ENST00000367064 POLR3AO14802 1390 aaPredicted RBP21.2■□□□□ 0.98
CD55-204ENST00000367064 DMRT2Q9Y5R5 561 aa21.2■□□□□ 0.98
CD55-204ENST00000367064 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
CD55-204ENST00000367064 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
CD55-204ENST00000367064 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
CD55-204ENST00000367064 ALKQ9UM73 1620 aa21.16■□□□□ 0.98
CD55-204ENST00000367064 SETD1AO15047 1707 aaKnown RBP21.16■□□□□ 0.98
CD55-204ENST00000367064 YTHDC2Q9H6S0 1430 aaKnown RBP21.16■□□□□ 0.98
CD55-204ENST00000367064 PUS7Q96PZ0 661 aaKnown RBP21.14■□□□□ 0.98
CD55-204ENST00000367064 GGNBP2Q9H3C7 697 aa21.14■□□□□ 0.97
CD55-204ENST00000367064 A0A1W2PP64 1363 aa21.14■□□□□ 0.97
CD55-204ENST00000367064 PTPRMP28827 1452 aa21.13■□□□□ 0.97
CD55-204ENST00000367064 TRMT2AQ8IZ69 625 aaKnown RBP21.13■□□□□ 0.97
CD55-204ENST00000367064 E9PSI1 815 aa21.12■□□□□ 0.97
CD55-204ENST00000367064 SKAP1Q86WV1 359 aa21.12■□□□□ 0.97
CD55-204ENST00000367064 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
CD55-204ENST00000367064 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
CD55-204ENST00000367064 IPO9Q96P70 1041 aaKnown RBP21.12■□□□□ 0.97
CD55-204ENST00000367064 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
CD55-204ENST00000367064 BCAR3O75815 825 aa21.12■□□□□ 0.97
CD55-204ENST00000367064 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
CD55-204ENST00000367064 WAPLQ7Z5K2 1190 aa21.11■□□□□ 0.97
CD55-204ENST00000367064 ESF1Q9H501 851 aaKnown RBP21.11■□□□□ 0.97
CD55-204ENST00000367064 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
CD55-204ENST00000367064 RUNDC1Q96C34 613 aa21.1■□□□□ 0.97
CD55-204ENST00000367064 CDK19Q9BWU1 502 aa21.1■□□□□ 0.97
CD55-204ENST00000367064 ANP32AP39687 249 aaKnown RBP21.1■□□□□ 0.97
CD55-204ENST00000367064 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
CD55-204ENST00000367064 UBR1Q8IWV7 1749 aa21.1■□□□□ 0.97
CD55-204ENST00000367064 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.09■□□□□ 0.97
CD55-204ENST00000367064 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
CD55-204ENST00000367064 USP32Q8NFA0 1604 aa21.09■□□□□ 0.97
CD55-204ENST00000367064 NRXN3Q9Y4C0 1643 aa21.09■□□□□ 0.97
CD55-204ENST00000367064 U2AF1L5P0DN76 240 aaPredicted RBP21.08■□□□□ 0.97
CD55-204ENST00000367064 U2AF1Q01081 240 aaKnown RBP eCLIP21.08■□□□□ 0.974e-9■■□□□ 13.6
CD55-204ENST00000367064 TNRQ92752 1358 aa21.08■□□□□ 0.97
CD55-204ENST00000367064 TERF2IPQ9NYB0 399 aa21.07■□□□□ 0.96
CD55-204ENST00000367064 CABP1Q9NZU7 370 aa21.07■□□□□ 0.96
CD55-204ENST00000367064 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
CD55-204ENST00000367064 ATAD2Q6PL18 1390 aa21.06■□□□□ 0.96
CD55-204ENST00000367064 NSD2O96028 1365 aa21.05■□□□□ 0.96
CD55-204ENST00000367064 FYB1O15117 783 aa21.05■□□□□ 0.96
CD55-204ENST00000367064 C3P01024 1663 aa21.05■□□□□ 0.96
CD55-204ENST00000367064 ABCC11Q96J66 1382 aa21.05■□□□□ 0.96
CD55-204ENST00000367064 FER1L4A9Z1Z3 1794 aa21.05■□□□□ 0.96
CD55-204ENST00000367064 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
CD55-204ENST00000367064 NGEFQ8N5V2 710 aa21.04■□□□□ 0.96
CD55-204ENST00000367064 TCERG1O14776 1098 aaKnown RBP21.03■□□□□ 0.96
CD55-204ENST00000367064 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
CD55-204ENST00000367064 NINLQ9Y2I6 1382 aa21.03■□□□□ 0.96
CD55-204ENST00000367064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
CD55-204ENST00000367064 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.02■□□□□ 0.95
CD55-204ENST00000367064 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
CD55-204ENST00000367064 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
CD55-204ENST00000367064 KNDC1Q76NI1 1749 aa21■□□□□ 0.95
CD55-204ENST00000367064 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
CD55-204ENST00000367064 FBLN1P23142 703 aa20.99■□□□□ 0.95
CD55-204ENST00000367064 CANXP27824 592 aaKnown RBP20.99■□□□□ 0.95
CD55-204ENST00000367064 NPM2Q86SE8 214 aaKnown RBP20.99■□□□□ 0.95
CD55-204ENST00000367064 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
CD55-204ENST00000367064 PDE4AP27815 886 aa20.98■□□□□ 0.95
CD55-204ENST00000367064 FRAT1Q92837 279 aaPredicted RBP20.98■□□□□ 0.95
CD55-204ENST00000367064 IQSEC2Q5JU85 1478 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms