RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 FANCAO15360 1455 aa10.38□□□□□ -0.75
CD46-208ENST00000367042 TRMT2AQ8IZ69 625 aaKnown RBP10.38□□□□□ -0.75
CD46-208ENST00000367042 USP19O94966 1318 aa10.38□□□□□ -0.75
CD46-208ENST00000367042 FAM43AQ8N2R8 423 aa10.38□□□□□ -0.75
CD46-208ENST00000367042 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
CD46-208ENST00000367042 PIK3C2GO75747 1445 aa10.38□□□□□ -0.75
CD46-208ENST00000367042 DEPDC5O75140 1603 aa10.37□□□□□ -0.75
CD46-208ENST00000367042 HSCBQ8IWL3 235 aa10.37□□□□□ -0.75
CD46-208ENST00000367042 MYH16Q9H6N6 1097 aa10.37□□□□□ -0.75
CD46-208ENST00000367042 ATP10AO60312 1499 aa10.36□□□□□ -0.75
CD46-208ENST00000367042 C22orf23Q9BZE7 217 aa10.36□□□□□ -0.75
CD46-208ENST00000367042 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
CD46-208ENST00000367042 GGT6Q6P531 493 aa10.36□□□□□ -0.75
CD46-208ENST00000367042 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
CD46-208ENST00000367042 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
CD46-208ENST00000367042 NSD3Q9BZ95 1437 aa10.35□□□□□ -0.75
CD46-208ENST00000367042 TBC1D32Q96NH3 1257 aa10.35□□□□□ -0.75
CD46-208ENST00000367042 ATP7AQ04656 1500 aa10.35□□□□□ -0.75
CD46-208ENST00000367042 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
CD46-208ENST00000367042 STK26Q9P289 416 aa10.35□□□□□ -0.75
CD46-208ENST00000367042 PANK2Q9BZ23 570 aa10.34□□□□□ -0.75
CD46-208ENST00000367042 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
CD46-208ENST00000367042 NGEFQ8N5V2 710 aa10.34□□□□□ -0.75
CD46-208ENST00000367042 ADGRL1O94910 1474 aa10.34□□□□□ -0.75
CD46-208ENST00000367042 EXOSC9Q06265 439 aaKnown RBP10.33□□□□□ -0.76
CD46-208ENST00000367042 PNNQ9H307 717 aaKnown RBP10.33□□□□□ -0.76
CD46-208ENST00000367042 VWDEQ8N2E2 1590 aa10.33□□□□□ -0.76
CD46-208ENST00000367042 MCM4P33991 863 aa10.33□□□□□ -0.76
CD46-208ENST00000367042 MVPQ14764 893 aaKnown RBP10.33□□□□□ -0.76
CD46-208ENST00000367042 LNPKQ9C0E8 428 aa10.33□□□□□ -0.76
CD46-208ENST00000367042 RRAGDQ9NQL2 400 aaPredicted RBP10.33□□□□□ -0.76
CD46-208ENST00000367042 TRAK2O60296 914 aa10.33□□□□□ -0.76
CD46-208ENST00000367042 SRPK2P78362 688 aaKnown RBP10.33□□□□□ -0.76
CD46-208ENST00000367042 KIDINS220Q9ULH0 1771 aa10.33□□□□□ -0.76
CD46-208ENST00000367042 SCAPERQ9BY12 1400 aa10.32□□□□□ -0.76
CD46-208ENST00000367042 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
CD46-208ENST00000367042 TRIM44Q96DX7 344 aaPredicted RBP10.32□□□□□ -0.76
CD46-208ENST00000367042 CHMP5Q9NZZ3 219 aa10.32□□□□□ -0.76
CD46-208ENST00000367042 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
CD46-208ENST00000367042 NINLQ9Y2I6 1382 aa10.31□□□□□ -0.76
CD46-208ENST00000367042 XRCC6P12956 609 aaKnown RBP eCLIP10.31□□□□□ -0.76
CD46-208ENST00000367042 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
CD46-208ENST00000367042 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
CD46-208ENST00000367042 WDR63Q8IWG1 891 aa10.31□□□□□ -0.76
CD46-208ENST00000367042 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
CD46-208ENST00000367042 NOB1Q9ULX3 412 aaKnown RBP10.3□□□□□ -0.76
CD46-208ENST00000367042 SYNMO15061 1565 aa10.3□□□□□ -0.76
CD46-208ENST00000367042 TET3O43151 1660 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 ANTXR1Q9H6X2 564 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 NPC1L1Q9UHC9 1359 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 TRIM27P14373 513 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 DDX19BQ9UMR2 479 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 CFAP74Q9C0B2 1584 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 POLR3AO14802 1390 aaPredicted RBP10.29□□□□□ -0.76
CD46-208ENST00000367042 SPHKAPQ2M3C7 1700 aa10.29□□□□□ -0.76
CD46-208ENST00000367042 PTPRTO14522 1441 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 TRPM2O94759 1503 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 NCLP19338 710 aaKnown RBP10.28□□□□□ -0.76
CD46-208ENST00000367042 RIPK4P57078 832 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 ANKRD45Q5TZF3 282 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 TMEM57Q8N5G2 664 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 C1orf115Q9H7X2 142 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 CD109Q6YHK3 1445 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
CD46-208ENST00000367042 UGGT1Q9NYU2 1555 aa10.27□□□□□ -0.76
CD46-208ENST00000367042 LAMC1P11047 1609 aa10.27□□□□□ -0.76
CD46-208ENST00000367042 ERVK-7P63135 1459 aa10.27□□□□□ -0.77
CD46-208ENST00000367042 CEP152O94986 1710 aa10.27□□□□□ -0.77
CD46-208ENST00000367042 ATF7IPQ6VMQ6 1270 aa10.27□□□□□ -0.77
CD46-208ENST00000367042 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
CD46-208ENST00000367042 NOS1P29475 1434 aa10.27□□□□□ -0.77
CD46-208ENST00000367042 AAMPQ13685 434 aa10.27□□□□□ -0.77
CD46-208ENST00000367042 CLTCL1P53675 1640 aa10.26□□□□□ -0.77
CD46-208ENST00000367042 POGZQ7Z3K3 1410 aa10.26□□□□□ -0.77
CD46-208ENST00000367042 KDM5AP29375 1690 aaKnown RBP10.26□□□□□ -0.77
CD46-208ENST00000367042 FRMPD1Q5SYB0 1578 aa10.26□□□□□ -0.77
CD46-208ENST00000367042 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
CD46-208ENST00000367042 APBB1O00213 710 aa10.26□□□□□ -0.77
CD46-208ENST00000367042 NPM1P06748 294 aaKnown RBP eCLIP10.26□□□□□ -0.77
CD46-208ENST00000367042 RNF17Q9BXT8 1623 aaKnown RBP10.26□□□□□ -0.77
CD46-208ENST00000367042 EVC2Q86UK5 1308 aa10.25□□□□□ -0.77
CD46-208ENST00000367042 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
CD46-208ENST00000367042 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
CD46-208ENST00000367042 MINK1Q8N4C8 1332 aaPredicted RBP10.25□□□□□ -0.77
CD46-208ENST00000367042 MRE11P49959 708 aa10.25□□□□□ -0.77
CD46-208ENST00000367042 ANP32BQ92688 251 aaKnown RBP10.25□□□□□ -0.77
CD46-208ENST00000367042 GBP4Q96PP9 640 aa10.25□□□□□ -0.77
CD46-208ENST00000367042 GRPEL1Q9HAV7 217 aa10.25□□□□□ -0.77
CD46-208ENST00000367042 MLH3Q9UHC1 1453 aa10.25□□□□□ -0.77
CD46-208ENST00000367042 MAP3K4Q9Y6R4 1608 aa10.24□□□□□ -0.77
CD46-208ENST00000367042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■■□□ 18.3
CD46-208ENST00000367042 UBE2Q2Q8WVN8 375 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 CFAP65Q6ZU64 1925 aaKnown RBP10.23□□□□□ -0.77
CD46-208ENST00000367042 FBLN1P23142 703 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 GLIPR1L2Q4G1C9 344 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
CD46-208ENST00000367042 LMTK2Q8IWU2 1503 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms