RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
CAPN8-201ENST00000366872 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
CAPN8-201ENST00000366872 ZNF518AQ6AHZ1 1483 aa16.47■□□□□ 0.23
CAPN8-201ENST00000366872 BCAR3O75815 825 aa16.47■□□□□ 0.23
CAPN8-201ENST00000366872 CCDC146Q8IYE0 955 aa16.46■□□□□ 0.23
CAPN8-201ENST00000366872 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
CAPN8-201ENST00000366872 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
CAPN8-201ENST00000366872 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
CAPN8-201ENST00000366872 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
CAPN8-201ENST00000366872 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
CAPN8-201ENST00000366872 ADGRF5Q8IZF2 1346 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 IGHDP01880 384 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 PIK3C2BO00750 1634 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 HECW2Q9P2P5 1572 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
CAPN8-201ENST00000366872 BECN1Q14457 450 aa16.44■□□□□ 0.22
CAPN8-201ENST00000366872 RGS3P49796 1198 aa16.43■□□□□ 0.22
CAPN8-201ENST00000366872 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
CAPN8-201ENST00000366872 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
CAPN8-201ENST00000366872 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
CAPN8-201ENST00000366872 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
CAPN8-201ENST00000366872 NOS1P29475 1434 aa16.4■□□□□ 0.22
CAPN8-201ENST00000366872 GLI2P10070 1586 aa16.4■□□□□ 0.22
CAPN8-201ENST00000366872 KIF3BO15066 747 aa16.4■□□□□ 0.22
CAPN8-201ENST00000366872 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
CAPN8-201ENST00000366872 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.21
CAPN8-201ENST00000366872 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
CAPN8-201ENST00000366872 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
CAPN8-201ENST00000366872 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
CAPN8-201ENST00000366872 CLTCQ00610 1675 aaKnown RBP16.37■□□□□ 0.21
CAPN8-201ENST00000366872 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
CAPN8-201ENST00000366872 MED14O60244 1454 aa16.37■□□□□ 0.21
CAPN8-201ENST00000366872 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
CAPN8-201ENST00000366872 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
CAPN8-201ENST00000366872 CFAP53Q96M91 514 aa16.36■□□□□ 0.21
CAPN8-201ENST00000366872 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
CAPN8-201ENST00000366872 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
CAPN8-201ENST00000366872 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
CAPN8-201ENST00000366872 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
CAPN8-201ENST00000366872 NPATQ14207 1427 aa16.35■□□□□ 0.21
CAPN8-201ENST00000366872 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
CAPN8-201ENST00000366872 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
CAPN8-201ENST00000366872 RWDD1Q9H446 243 aaPredicted RBP16.35■□□□□ 0.21
CAPN8-201ENST00000366872 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
CAPN8-201ENST00000366872 UPF2Q9HAU5 1272 aaKnown RBP16.35■□□□□ 0.21
CAPN8-201ENST00000366872 ABCC3O15438 1527 aa16.34■□□□□ 0.21
CAPN8-201ENST00000366872 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
CAPN8-201ENST00000366872 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.21
CAPN8-201ENST00000366872 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
CAPN8-201ENST00000366872 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
CAPN8-201ENST00000366872 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
CAPN8-201ENST00000366872 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
CAPN8-201ENST00000366872 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
CAPN8-201ENST00000366872 IL16Q14005 1332 aa16.31■□□□□ 0.2
CAPN8-201ENST00000366872 CDC42BPGQ6DT37 1551 aa16.31■□□□□ 0.2
CAPN8-201ENST00000366872 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
CAPN8-201ENST00000366872 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
CAPN8-201ENST00000366872 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
CAPN8-201ENST00000366872 SEC24BO95487 1268 aa16.3■□□□□ 0.2
CAPN8-201ENST00000366872 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
CAPN8-201ENST00000366872 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
CAPN8-201ENST00000366872 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
CAPN8-201ENST00000366872 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
CAPN8-201ENST00000366872 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
CAPN8-201ENST00000366872 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
CAPN8-201ENST00000366872 RLBP1P12271 317 aa16.28■□□□□ 0.2
CAPN8-201ENST00000366872 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
CAPN8-201ENST00000366872 MTHFSP49914 203 aa16.27■□□□□ 0.2
CAPN8-201ENST00000366872 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
CAPN8-201ENST00000366872 CFAP65Q6ZU64 1925 aaKnown RBP16.27■□□□□ 0.2
CAPN8-201ENST00000366872 KIF20BQ96Q89 1820 aa16.27■□□□□ 0.19
CAPN8-201ENST00000366872 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
CAPN8-201ENST00000366872 DZIP1LQ8IYY4 767 aaKnown RBP16.24■□□□□ 0.19
CAPN8-201ENST00000366872 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
CAPN8-201ENST00000366872 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
CAPN8-201ENST00000366872 DDX19BQ9UMR2 479 aa16.24■□□□□ 0.19
CAPN8-201ENST00000366872 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
CAPN8-201ENST00000366872 NCOA3Q9Y6Q9 1424 aa16.23■□□□□ 0.19
CAPN8-201ENST00000366872 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
CAPN8-201ENST00000366872 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
CAPN8-201ENST00000366872 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
CAPN8-201ENST00000366872 CD109Q6YHK3 1445 aa16.23■□□□□ 0.19
CAPN8-201ENST00000366872 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
CAPN8-201ENST00000366872 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
CAPN8-201ENST00000366872 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
CAPN8-201ENST00000366872 PNPLA6Q8IY17 1366 aa16.21■□□□□ 0.19
CAPN8-201ENST00000366872 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
CAPN8-201ENST00000366872 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.18
CAPN8-201ENST00000366872 PNNQ9H307 717 aaKnown RBP16.2■□□□□ 0.18
CAPN8-201ENST00000366872 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
CAPN8-201ENST00000366872 NEO1Q92859 1461 aa16.2■□□□□ 0.18
CAPN8-201ENST00000366872 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
CAPN8-201ENST00000366872 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
CAPN8-201ENST00000366872 POGKQ9P215 609 aa16.19■□□□□ 0.18
CAPN8-201ENST00000366872 PTPRMP28827 1452 aa16.19■□□□□ 0.18
CAPN8-201ENST00000366872 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
CAPN8-201ENST00000366872 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms