RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
MRPL55-218ENST00000366747 PHLPP1O60346 1717 aa21.09■□□□□ 0.97
MRPL55-218ENST00000366747 PRAM1Q96QH2 718 aa21.08■□□□□ 0.97
MRPL55-218ENST00000366747 POGKQ9P215 609 aa21.08■□□□□ 0.97
MRPL55-218ENST00000366747 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.96
MRPL55-218ENST00000366747 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
MRPL55-218ENST00000366747 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
MRPL55-218ENST00000366747 TRAK1Q9UPV9 953 aa21.06■□□□□ 0.96
MRPL55-218ENST00000366747 MED1Q15648 1581 aaPredicted RBP21.06■□□□□ 0.96
MRPL55-218ENST00000366747 NHSL1Q5SYE7 1610 aa21.05■□□□□ 0.96
MRPL55-218ENST00000366747 ADGRB2O60241 1585 aa21.05■□□□□ 0.96
MRPL55-218ENST00000366747 EIF3AQ14152 1382 aaKnown RBP21.04■□□□□ 0.96
MRPL55-218ENST00000366747 SPATA31A6Q5VVP1 1343 aa21.03■□□□□ 0.96
MRPL55-218ENST00000366747 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
MRPL55-218ENST00000366747 LRRC59Q96AG4 307 aaKnown RBP21.01■□□□□ 0.95
MRPL55-218ENST00000366747 ANKARQ7Z5J8 1434 aa21.01■□□□□ 0.95
MRPL55-218ENST00000366747 NPHP3Q7Z494 1330 aa21.01■□□□□ 0.95
MRPL55-218ENST00000366747 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
MRPL55-218ENST00000366747 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
MRPL55-218ENST00000366747 ORAI2Q96SN7 254 aa21■□□□□ 0.95
MRPL55-218ENST00000366747 ESCO1Q5FWF5 840 aa20.99■□□□□ 0.95
MRPL55-218ENST00000366747 SOS2Q07890 1332 aaPredicted RBP20.99■□□□□ 0.95
MRPL55-218ENST00000366747 SAFB2Q14151 953 aaKnown RBP eCLIP20.98■□□□□ 0.95
MRPL55-218ENST00000366747 ARHGEF28Q8N1W1 1705 aaKnown RBP20.98■□□□□ 0.95
MRPL55-218ENST00000366747 SHPRHQ149N8 1683 aa20.97■□□□□ 0.95
MRPL55-218ENST00000366747 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
MRPL55-218ENST00000366747 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
MRPL55-218ENST00000366747 KIF1AQ12756 1690 aa20.96■□□□□ 0.95
MRPL55-218ENST00000366747 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
MRPL55-218ENST00000366747 TRPM1Q7Z4N2 1603 aa20.94■□□□□ 0.94
MRPL55-218ENST00000366747 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
MRPL55-218ENST00000366747 ROCK2O75116 1388 aaKnown RBP20.94■□□□□ 0.94
MRPL55-218ENST00000366747 MINK1Q8N4C8 1332 aaPredicted RBP20.93■□□□□ 0.94
MRPL55-218ENST00000366747 GPRASP1Q5JY77 1395 aa20.93■□□□□ 0.94
MRPL55-218ENST00000366747 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
MRPL55-218ENST00000366747 NUTM2FA1L443 756 aa20.91■□□□□ 0.94
MRPL55-218ENST00000366747 PNPLA6Q8IY17 1366 aa20.91■□□□□ 0.94
MRPL55-218ENST00000366747 CENPJQ9HC77 1338 aaPredicted RBP20.91■□□□□ 0.94
MRPL55-218ENST00000366747 PHF8Q9UPP1 1060 aa20.91■□□□□ 0.94
MRPL55-218ENST00000366747 PXDNQ92626 1479 aa20.9■□□□□ 0.94
MRPL55-218ENST00000366747 FOXO3O43524 673 aa20.9■□□□□ 0.94
MRPL55-218ENST00000366747 DDX17Q92841 729 aaKnown RBP20.9■□□□□ 0.94
MRPL55-218ENST00000366747 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
MRPL55-218ENST00000366747 TIMELESSQ9UNS1 1208 aa20.9■□□□□ 0.94
MRPL55-218ENST00000366747 RALGAPBQ86X10 1494 aa20.88■□□□□ 0.93
MRPL55-218ENST00000366747 NBPF8Q3BBV2 869 aa20.87■□□□□ 0.93
MRPL55-218ENST00000366747 PSME1Q06323 249 aa20.86■□□□□ 0.93
MRPL55-218ENST00000366747 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
MRPL55-218ENST00000366747 ATP7BP35670 1465 aa20.85■□□□□ 0.93
MRPL55-218ENST00000366747 LRP6O75581 1613 aa20.85■□□□□ 0.93
MRPL55-218ENST00000366747 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
MRPL55-218ENST00000366747 PRR36Q9H6K5 1346 aa20.84■□□□□ 0.93
MRPL55-218ENST00000366747 COL22A1Q8NFW1 1626 aaPredicted RBP20.83■□□□□ 0.93
MRPL55-218ENST00000366747 MEX3CQ5U5Q3 659 aaKnown RBP20.83■□□□□ 0.93
MRPL55-218ENST00000366747 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
MRPL55-218ENST00000366747 CDK19Q9BWU1 502 aa20.83■□□□□ 0.93
MRPL55-218ENST00000366747 SPATA31A3Q5VYP0 1347 aa20.82■□□□□ 0.92
MRPL55-218ENST00000366747 NUDT16Q96DE0 195 aaKnown RBP20.82■□□□□ 0.92
MRPL55-218ENST00000366747 CARD11Q9BXL7 1154 aa20.82■□□□□ 0.92
MRPL55-218ENST00000366747 CCDC61Q9Y6R9 512 aa20.82■□□□□ 0.92
MRPL55-218ENST00000366747 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
MRPL55-218ENST00000366747 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
MRPL55-218ENST00000366747 TNS3Q68CZ2 1445 aa20.8■□□□□ 0.92
MRPL55-218ENST00000366747 ARHGEF10O15013 1369 aa20.8■□□□□ 0.92
MRPL55-218ENST00000366747 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
MRPL55-218ENST00000366747 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
MRPL55-218ENST00000366747 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
MRPL55-218ENST00000366747 XPCQ01831 940 aaPredicted RBP20.79■□□□□ 0.92
MRPL55-218ENST00000366747 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
MRPL55-218ENST00000366747 RGPD8O14715 1765 aaPredicted RBP20.79■□□□□ 0.92
MRPL55-218ENST00000366747 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
MRPL55-218ENST00000366747 ZNF772Q68DY9 489 aaPredicted RBP20.78■□□□□ 0.92
MRPL55-218ENST00000366747 ILDR2Q71H61 639 aa20.78■□□□□ 0.92
MRPL55-218ENST00000366747 PMFBP1Q8TBY8 1022 aa20.78■□□□□ 0.92
MRPL55-218ENST00000366747 RGS17Q9UGC6 210 aaPredicted RBP20.78■□□□□ 0.92
MRPL55-218ENST00000366747 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
MRPL55-218ENST00000366747 SRPK2P78362 688 aaKnown RBP20.77■□□□□ 0.92
MRPL55-218ENST00000366747 NGDNQ8NEJ9 315 aaKnown RBP20.77■□□□□ 0.92
MRPL55-218ENST00000366747 POLR3AO14802 1390 aaPredicted RBP20.76■□□□□ 0.91
MRPL55-218ENST00000366747 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
MRPL55-218ENST00000366747 TOPAZ1Q8N9V7 1692 aa20.75■□□□□ 0.91
MRPL55-218ENST00000366747 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
MRPL55-218ENST00000366747 BRD4O60885 1362 aaPredicted RBP20.72■□□□□ 0.91
MRPL55-218ENST00000366747 ATAD2Q6PL18 1390 aa20.72■□□□□ 0.91
MRPL55-218ENST00000366747 CABP2Q9NPB3 220 aa20.71■□□□□ 0.91
MRPL55-218ENST00000366747 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
MRPL55-218ENST00000366747 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
MRPL55-218ENST00000366747 C8orf37Q96NL8 207 aa20.7■□□□□ 0.9
MRPL55-218ENST00000366747 ACEP12821 1306 aa20.7■□□□□ 0.9
MRPL55-218ENST00000366747 AFF2P51816 1311 aa20.7■□□□□ 0.9
MRPL55-218ENST00000366747 ADAMTS2O95450 1211 aa20.69■□□□□ 0.9
MRPL55-218ENST00000366747 POTEAQ6S8J7 498 aa20.68■□□□□ 0.9
MRPL55-218ENST00000366747 NGLY1Q96IV0 654 aa20.68■□□□□ 0.9
MRPL55-218ENST00000366747 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
MRPL55-218ENST00000366747 SOCS7O14512 581 aa20.67■□□□□ 0.9
MRPL55-218ENST00000366747 FNBP4Q8N3X1 1017 aaPredicted RBP20.67■□□□□ 0.9
MRPL55-218ENST00000366747 HAP1P54257 671 aaPredicted RBP20.66■□□□□ 0.9
MRPL55-218ENST00000366747 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
MRPL55-218ENST00000366747 ALS2Q96Q42 1657 aa20.66■□□□□ 0.9
MRPL55-218ENST00000366747 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms