RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 KIF1AQ12756 1690 aa17.7■□□□□ 0.42
MRPL55-213ENST00000366740 MYOM2P54296 1465 aa17.69■□□□□ 0.42
MRPL55-213ENST00000366740 PXDNQ92626 1479 aa17.69■□□□□ 0.42
MRPL55-213ENST00000366740 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-213ENST00000366740 EP400Q96L91 3159 aa17.68■□□□□ 0.42
MRPL55-213ENST00000366740 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
MRPL55-213ENST00000366740 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
MRPL55-213ENST00000366740 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
MRPL55-213ENST00000366740 ATRNO75882 1429 aa17.67■□□□□ 0.42
MRPL55-213ENST00000366740 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
MRPL55-213ENST00000366740 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
MRPL55-213ENST00000366740 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
MRPL55-213ENST00000366740 TECPR2O15040 1411 aa17.64■□□□□ 0.42
MRPL55-213ENST00000366740 FNBP4Q8N3X1 1017 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-213ENST00000366740 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.41
MRPL55-213ENST00000366740 USP32Q8NFA0 1604 aa17.63■□□□□ 0.41
MRPL55-213ENST00000366740 USP21Q9UK80 565 aa17.63■□□□□ 0.41
MRPL55-213ENST00000366740 TRPC5Q9UL62 973 aaPredicted RBP17.63■□□□□ 0.41
MRPL55-213ENST00000366740 NWD2Q9ULI1 1742 aa17.63■□□□□ 0.41
MRPL55-213ENST00000366740 BCL9LQ86UU0 1499 aa17.62■□□□□ 0.41
MRPL55-213ENST00000366740 GLI3P10071 1580 aa17.62■□□□□ 0.41
MRPL55-213ENST00000366740 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
MRPL55-213ENST00000366740 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
MRPL55-213ENST00000366740 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
MRPL55-213ENST00000366740 SLIT2O94813 1529 aa17.56■□□□□ 0.4
MRPL55-213ENST00000366740 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
MRPL55-213ENST00000366740 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
MRPL55-213ENST00000366740 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
MRPL55-213ENST00000366740 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
MRPL55-213ENST00000366740 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
MRPL55-213ENST00000366740 NRAPQ86VF7 1730 aa17.54■□□□□ 0.4
MRPL55-213ENST00000366740 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
MRPL55-213ENST00000366740 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
MRPL55-213ENST00000366740 TRPM3Q9HCF6 1732 aaPredicted RBP17.52■□□□□ 0.4
MRPL55-213ENST00000366740 CRYBG1Q9Y4K1 1723 aa17.52■□□□□ 0.39
MRPL55-213ENST00000366740 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
MRPL55-213ENST00000366740 RALGAPBQ86X10 1494 aa17.51■□□□□ 0.39
MRPL55-213ENST00000366740 FOXO3O43524 673 aa17.51■□□□□ 0.39
MRPL55-213ENST00000366740 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
MRPL55-213ENST00000366740 YTHDC2Q9H6S0 1430 aaKnown RBP17.51■□□□□ 0.39
MRPL55-213ENST00000366740 ADGRB2O60241 1585 aa17.5■□□□□ 0.39
MRPL55-213ENST00000366740 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-213ENST00000366740 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
MRPL55-213ENST00000366740 GJD4Q96KN9 370 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-213ENST00000366740 ALS2Q96Q42 1657 aa17.5■□□□□ 0.39
MRPL55-213ENST00000366740 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
MRPL55-213ENST00000366740 FOXD1Q16676 465 aa17.49■□□□□ 0.39
MRPL55-213ENST00000366740 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
MRPL55-213ENST00000366740 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
MRPL55-213ENST00000366740 LRP5O75197 1615 aa17.48■□□□□ 0.39
MRPL55-213ENST00000366740 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
MRPL55-213ENST00000366740 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
MRPL55-213ENST00000366740 STK26Q9P289 416 aa17.46■□□□□ 0.39
MRPL55-213ENST00000366740 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
MRPL55-213ENST00000366740 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
MRPL55-213ENST00000366740 DLC1Q96QB1 1528 aa17.46■□□□□ 0.39
MRPL55-213ENST00000366740 BLMP54132 1417 aaPredicted RBP17.46■□□□□ 0.39
MRPL55-213ENST00000366740 ITSN1Q15811 1721 aa17.45■□□□□ 0.38
MRPL55-213ENST00000366740 UNC5CLQ8IV45 518 aa17.45■□□□□ 0.38
MRPL55-213ENST00000366740 COL14A1Q05707 1796 aaKnown RBP17.44■□□□□ 0.38
MRPL55-213ENST00000366740 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
MRPL55-213ENST00000366740 TMEM132EQ6IEE7 984 aa17.44■□□□□ 0.38
MRPL55-213ENST00000366740 SIRT1Q96EB6 747 aa17.44■□□□□ 0.38
MRPL55-213ENST00000366740 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
MRPL55-213ENST00000366740 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
MRPL55-213ENST00000366740 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
MRPL55-213ENST00000366740 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
MRPL55-213ENST00000366740 ARHGEF28Q8N1W1 1705 aaKnown RBP17.4■□□□□ 0.38
MRPL55-213ENST00000366740 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
MRPL55-213ENST00000366740 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.38
MRPL55-213ENST00000366740 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
MRPL55-213ENST00000366740 PHF8Q9UPP1 1060 aa17.38■□□□□ 0.37
MRPL55-213ENST00000366740 THSD7AQ9UPZ6 1657 aa17.38■□□□□ 0.37
MRPL55-213ENST00000366740 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
MRPL55-213ENST00000366740 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
MRPL55-213ENST00000366740 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
MRPL55-213ENST00000366740 VPS72Q15906 364 aa17.37■□□□□ 0.37
MRPL55-213ENST00000366740 ONECUT3O60422 494 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-213ENST00000366740 PSME1Q06323 249 aa17.36■□□□□ 0.37
MRPL55-213ENST00000366740 SEPT12Q8IYM1 358 aa17.34■□□□□ 0.37
MRPL55-213ENST00000366740 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
MRPL55-213ENST00000366740 TULP4Q9NRJ4 1543 aa17.34■□□□□ 0.37
MRPL55-213ENST00000366740 TOPAZ1Q8N9V7 1692 aa17.33■□□□□ 0.37
MRPL55-213ENST00000366740 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
MRPL55-213ENST00000366740 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
MRPL55-213ENST00000366740 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-213ENST00000366740 DEFB132Q7Z7B7 95 aa17.32■□□□□ 0.36
MRPL55-213ENST00000366740 PRAM1Q96QH2 718 aa17.31■□□□□ 0.36
MRPL55-213ENST00000366740 KRT27Q7Z3Y8 459 aa17.3■□□□□ 0.36
MRPL55-213ENST00000366740 RREB1Q92766 1687 aa17.29■□□□□ 0.36
MRPL55-213ENST00000366740 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
MRPL55-213ENST00000366740 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
MRPL55-213ENST00000366740 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
MRPL55-213ENST00000366740 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
MRPL55-213ENST00000366740 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.36
MRPL55-213ENST00000366740 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
MRPL55-213ENST00000366740 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
MRPL55-213ENST00000366740 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
MRPL55-213ENST00000366740 NUP188Q5SRE5 1749 aa17.25■□□□□ 0.35
MRPL55-213ENST00000366740 POGKQ9P215 609 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms