RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
LMNA-202ENST00000361308 QRICH2Q9H0J4 1663 aa23.67■■□□□ 1.38
LMNA-202ENST00000361308 C11orf95C9JLR9 678 aaPredicted RBP23.67■■□□□ 1.38
LMNA-202ENST00000361308 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
LMNA-202ENST00000361308 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
LMNA-202ENST00000361308 C14orf37Q86TY3 774 aa23.65■■□□□ 1.38
LMNA-202ENST00000361308 STRCP1A6NGW2 1772 aa23.64■■□□□ 1.37
LMNA-202ENST00000361308 DISP3Q9P2K9 1392 aa23.63■■□□□ 1.37
LMNA-202ENST00000361308 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
LMNA-202ENST00000361308 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
LMNA-202ENST00000361308 CDK19Q9BWU1 502 aa23.62■■□□□ 1.37
LMNA-202ENST00000361308 WASLO00401 505 aaPredicted RBP23.61■■□□□ 1.37
LMNA-202ENST00000361308 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
LMNA-202ENST00000361308 KIF7Q2M1P5 1343 aa23.61■■□□□ 1.37
LMNA-202ENST00000361308 WASHC2AQ641Q2 1341 aa23.61■■□□□ 1.37
LMNA-202ENST00000361308 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.6■■□□□ 1.37
LMNA-202ENST00000361308 NCOA3Q9Y6Q9 1424 aa23.59■■□□□ 1.37
LMNA-202ENST00000361308 C19orf44Q9H6X5 657 aa23.58■■□□□ 1.37
LMNA-202ENST00000361308 CABP2Q9NPB3 220 aa23.58■■□□□ 1.37
LMNA-202ENST00000361308 CCDC7Q96M83 1385 aa23.58■■□□□ 1.36
LMNA-202ENST00000361308 PUS7Q96PZ0 661 aaKnown RBP23.57■■□□□ 1.36
LMNA-202ENST00000361308 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
LMNA-202ENST00000361308 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
LMNA-202ENST00000361308 TULP4Q9NRJ4 1543 aa23.56■■□□□ 1.36
LMNA-202ENST00000361308 ADGRB2O60241 1585 aa23.53■■□□□ 1.36
LMNA-202ENST00000361308 MSH6P52701 1360 aa23.52■■□□□ 1.35
LMNA-202ENST00000361308 NUTM2FA1L443 756 aa23.51■■□□□ 1.35
LMNA-202ENST00000361308 ATF3P18847 181 aa23.51■■□□□ 1.35
LMNA-202ENST00000361308 LTBP4Q8N2S1 1624 aa23.5■■□□□ 1.35
LMNA-202ENST00000361308 NALCNQ8IZF0 1738 aa23.5■■□□□ 1.35
LMNA-202ENST00000361308 ATAD2Q6PL18 1390 aa23.5■■□□□ 1.35
LMNA-202ENST00000361308 NUDT16Q96DE0 195 aaKnown RBP23.5■■□□□ 1.35
LMNA-202ENST00000361308 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
LMNA-202ENST00000361308 DDX10Q13206 875 aaKnown RBP23.48■■□□□ 1.35
LMNA-202ENST00000361308 CADPS2Q86UW7 1296 aa23.48■■□□□ 1.35
LMNA-202ENST00000361308 CCDC61Q9Y6R9 512 aa23.48■■□□□ 1.35
LMNA-202ENST00000361308 CDC42BPGQ6DT37 1551 aa23.47■■□□□ 1.35
LMNA-202ENST00000361308 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
LMNA-202ENST00000361308 DCCP43146 1447 aa23.45■■□□□ 1.34
LMNA-202ENST00000361308 PRR36Q9H6K5 1346 aa23.45■■□□□ 1.34
LMNA-202ENST00000361308 CABP1Q9NZU7 370 aa23.45■■□□□ 1.34
LMNA-202ENST00000361308 XIRP1Q702N8 1843 aaKnown RBP23.44■■□□□ 1.34
LMNA-202ENST00000361308 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
LMNA-202ENST00000361308 NINLQ9Y2I6 1382 aa23.42■■□□□ 1.34
LMNA-202ENST00000361308 ATP7BP35670 1465 aa23.42■■□□□ 1.34
LMNA-202ENST00000361308 PPIP5K1Q6PFW1 1433 aa23.4■■□□□ 1.34
LMNA-202ENST00000361308 FMN2Q9NZ56 1722 aa23.4■■□□□ 1.34
LMNA-202ENST00000361308 PANK3Q9H999 370 aa23.4■■□□□ 1.34
LMNA-202ENST00000361308 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.34
LMNA-202ENST00000361308 PLEKHG3A1L390 1219 aa23.38■■□□□ 1.33
LMNA-202ENST00000361308 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
LMNA-202ENST00000361308 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
LMNA-202ENST00000361308 MST1RQ04912 1400 aa23.36■■□□□ 1.33
LMNA-202ENST00000361308 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
LMNA-202ENST00000361308 USP32Q8NFA0 1604 aa23.36■■□□□ 1.33
LMNA-202ENST00000361308 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
LMNA-202ENST00000361308 HDGFL2Q7Z4V5 671 aaPredicted RBP23.36■■□□□ 1.33
LMNA-202ENST00000361308 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
LMNA-202ENST00000361308 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
LMNA-202ENST00000361308 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
LMNA-202ENST00000361308 MYOM1P52179 1685 aa23.34■■□□□ 1.33
LMNA-202ENST00000361308 ANKRD36BQ8N2N9 1353 aa23.34■■□□□ 1.33
LMNA-202ENST00000361308 CERKQ8TCT0 537 aa23.33■■□□□ 1.33
LMNA-202ENST00000361308 RGPD8O14715 1765 aaPredicted RBP23.33■■□□□ 1.33
LMNA-202ENST00000361308 ACEP12821 1306 aa23.33■■□□□ 1.33
LMNA-202ENST00000361308 ZNF692Q9BU19 519 aaPredicted RBP23.33■■□□□ 1.32
LMNA-202ENST00000361308 ITSN1Q15811 1721 aa23.31■■□□□ 1.32
LMNA-202ENST00000361308 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
LMNA-202ENST00000361308 A0A1W2PP64 1363 aa23.3■■□□□ 1.32
LMNA-202ENST00000361308 TOPAZ1Q8N9V7 1692 aa23.3■■□□□ 1.32
LMNA-202ENST00000361308 TOM1O60784 492 aa23.3■■□□□ 1.32
LMNA-202ENST00000361308 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
LMNA-202ENST00000361308 KNSTRNQ9Y448 316 aa23.3■■□□□ 1.32
LMNA-202ENST00000361308 PER1O15534 1290 aaPredicted RBP23.29■■□□□ 1.32
LMNA-202ENST00000361308 CD163L1Q9NR16 1453 aa23.29■■□□□ 1.32
LMNA-202ENST00000361308 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
LMNA-202ENST00000361308 POLR3AO14802 1390 aaPredicted RBP23.28■■□□□ 1.32
LMNA-202ENST00000361308 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
LMNA-202ENST00000361308 FOXO3O43524 673 aa23.28■■□□□ 1.32
LMNA-202ENST00000361308 IQSEC2Q5JU85 1478 aa23.27■■□□□ 1.32
LMNA-202ENST00000361308 PSME1Q06323 249 aa23.27■■□□□ 1.32
LMNA-202ENST00000361308 BRINP3Q76B58 766 aa23.26■■□□□ 1.31
LMNA-202ENST00000361308 NSD3Q9BZ95 1437 aa23.23■■□□□ 1.31
LMNA-202ENST00000361308 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
LMNA-202ENST00000361308 USP6P35125 1406 aa23.21■■□□□ 1.31
LMNA-202ENST00000361308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.21■■□□□ 1.31
LMNA-202ENST00000361308 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
LMNA-202ENST00000361308 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
LMNA-202ENST00000361308 CGNL1Q0VF96 1302 aa23.2■■□□□ 1.3
LMNA-202ENST00000361308 EDC4Q6P2E9 1401 aaKnown RBP23.2■■□□□ 1.3
LMNA-202ENST00000361308 CNGB1Q14028 1251 aaPredicted RBP23.19■■□□□ 1.3
LMNA-202ENST00000361308 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
LMNA-202ENST00000361308 PIP4K2BP78356 416 aa23.19■■□□□ 1.3
LMNA-202ENST00000361308 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
LMNA-202ENST00000361308 DDX17Q92841 729 aaKnown RBP23.19■■□□□ 1.3
LMNA-202ENST00000361308 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
LMNA-202ENST00000361308 TTC21BQ7Z4L5 1316 aa23.18■■□□□ 1.3
LMNA-202ENST00000361308 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
LMNA-202ENST00000361308 AMER1Q5JTC6 1135 aaPredicted RBP23.18■■□□□ 1.3
LMNA-202ENST00000361308 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms