RNA–Protein interactions for RNA: ENST00000360449.3

CPNE8-202, Transcript of copine 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CPNE8, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-202ENST00000360449 DNAJC14Q6Y2X3 702 aaPredicted RBP6.01□□□□□ -1.45
CPNE8-202ENST00000360449 PRR7Q8TB68 274 aa6.01□□□□□ -1.45
CPNE8-202ENST00000360449 ZDHHC16Q969W1 377 aa6.01□□□□□ -1.45
CPNE8-202ENST00000360449 CDCA7LQ96GN5 454 aa6.01□□□□□ -1.45
CPNE8-202ENST00000360449 FOSBP53539 338 aa6□□□□□ -1.45
CPNE8-202ENST00000360449 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
CPNE8-202ENST00000360449 SREK1Q8WXA9 508 aaKnown RBP6□□□□□ -1.45
CPNE8-202ENST00000360449 CCDC180Q9P1Z9 1646 aa6□□□□□ -1.45
CPNE8-202ENST00000360449 GPR37L1O60883 481 aa5.99□□□□□ -1.45
CPNE8-202ENST00000360449 FDX1P10109 184 aa5.99□□□□□ -1.45
CPNE8-202ENST00000360449 CTDSPL2Q05D32 466 aa5.99□□□□□ -1.45
CPNE8-202ENST00000360449 HMX1Q9NP08 348 aaPredicted RBP5.99□□□□□ -1.45
CPNE8-202ENST00000360449 DCAF1Q9Y4B6 1507 aa5.99□□□□□ -1.45
CPNE8-202ENST00000360449 VAMP1P23763 118 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 MARSP56192 900 aaKnown RBP5.98□□□□□ -1.45
CPNE8-202ENST00000360449 MTMR2Q13614 643 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 TBC1D9Q6ZT07 1266 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 RDH13Q8NBN7 331 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 EYA1Q99502 592 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 TMEM164Q5U3C3 297 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 GIPC2Q8TF65 315 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 PCGF6Q9BYE7 350 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 TMEM134Q9H6X4 195 aa5.98□□□□□ -1.45
CPNE8-202ENST00000360449 NOVA2Q9UNW9 492 aaKnown RBP5.98□□□□□ -1.45
CPNE8-202ENST00000360449 SOWAHDA6NJG2 315 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 NBPF26B4DH59 902 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 HOXA2O43364 376 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 SSFA2P28290 1259 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 ATN1P54259 1190 aaPredicted RBP5.97□□□□□ -1.45
CPNE8-202ENST00000360449 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
CPNE8-202ENST00000360449 KANK4Q5T7N3 995 aaPredicted RBP5.97□□□□□ -1.45
CPNE8-202ENST00000360449 C3orf67Q6ZVT6 689 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 SLF2Q8IX21 1173 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 TSC1Q92574 1164 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 PCDHGA4Q9Y5G9 962 aa5.97□□□□□ -1.45
CPNE8-202ENST00000360449 C19orf67A6NJJ6 358 aa5.96□□□□□ -1.46
CPNE8-202ENST00000360449 FAM196BA6NMK8 535 aa5.96□□□□□ -1.46
CPNE8-202ENST00000360449 ZC3H6P61129 1189 aaKnown RBP5.96□□□□□ -1.46
CPNE8-202ENST00000360449 ZNF592Q92610 1267 aa5.96□□□□□ -1.46
CPNE8-202ENST00000360449 NCLP19338 710 aaKnown RBP5.95□□□□□ -1.46
CPNE8-202ENST00000360449 ZNF454Q8N9F8 522 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 ZMIZ1Q9ULJ6 1067 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 SEC24BO95487 1268 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 GRIPAP1Q4V328 841 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 PLEKHM2Q8IWE5 1019 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 STK32AQ8WU08 396 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 LRRN4Q8WUT4 740 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 UBXN4Q92575 508 aa5.95□□□□□ -1.46
CPNE8-202ENST00000360449 CLP1Q92989 425 aaKnown RBP5.95□□□□□ -1.46
CPNE8-202ENST00000360449 BIN2Q9UBW5 565 aaPredicted RBP5.95□□□□□ -1.46
CPNE8-202ENST00000360449 PPM1GO15355 546 aaPredicted RBP5.94□□□□□ -1.46
CPNE8-202ENST00000360449 GALR2O43603 387 aaPredicted RBP5.94□□□□□ -1.46
CPNE8-202ENST00000360449 GCGRP47871 477 aa5.94□□□□□ -1.46
CPNE8-202ENST00000360449 PHLDB3Q6NSJ2 640 aa5.94□□□□□ -1.46
CPNE8-202ENST00000360449 LARP1Q6PKG0 1096 aaKnown RBP5.94□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L3A6NCW0 530 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L4A6NCW7 530 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 ATMINO43313 823 aaPredicted RBP5.93□□□□□ -1.46
CPNE8-202ENST00000360449 ASTLQ6HA08 431 aaPredicted RBP5.93□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L2Q6R6M4 530 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L1Q7RTZ2 530 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 FAM200AQ8TCP9 573 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 EIF5BO60841 1220 aaKnown RBP5.93□□□□□ -1.46
CPNE8-202ENST00000360449 NR1H3Q13133 447 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 NUDT18Q6ZVK8 323 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 PACS2Q86VP3 889 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 SPATA32Q96LK8 384 aa5.93□□□□□ -1.46
CPNE8-202ENST00000360449 CDCA7Q9BWT1 371 aaPredicted RBP5.93□□□□□ -1.46
CPNE8-202ENST00000360449 ANKRD33BA6NCL7 494 aa5.92□□□□□ -1.46
CPNE8-202ENST00000360449 LZTS3O60299 673 aaPredicted RBP5.92□□□□□ -1.46
CPNE8-202ENST00000360449 SWI5Q1ZZU3 235 aa5.92□□□□□ -1.46
CPNE8-202ENST00000360449 ADAM33Q9BZ11 813 aa5.92□□□□□ -1.46
CPNE8-202ENST00000360449 KDM4FA0A1W2PPD8 638 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L5A8MUK1 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L15C9J2P7 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L10C9JJH3 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L13C9JLJ4 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L12C9JPN9 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L11C9JVI0 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L21D6R901 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L18D6R9N7 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L22D6RA61 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L17D6RBQ6 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L19D6RCP7 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L20D6RJB6 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 ATP5J2-PTCD1G3V325 749 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 C6orf229H3BNL8 230 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 ATP2B4P23634 1241 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 SLC4A3P48751 1232 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 USP17L24Q0WX57 530 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 PCDHGC3Q9UN70 934 aa5.91□□□□□ -1.46
CPNE8-202ENST00000360449 SKIP12755 728 aa5.9□□□□□ -1.46
CPNE8-202ENST00000360449 NPAS4Q8IUM7 802 aa5.9□□□□□ -1.46
CPNE8-202ENST00000360449 C1orf216Q8TAB5 229 aa5.9□□□□□ -1.46
CPNE8-202ENST00000360449 TATDN2Q93075 761 aa5.9□□□□□ -1.46
CPNE8-202ENST00000360449 EGFL7Q9UHF1 273 aa5.9□□□□□ -1.46
CPNE8-202ENST00000360449 PNMA3Q9UL41 463 aa5.9□□□□□ -1.46
CPNE8-202ENST00000360449 CFAP99D6REC4 459 aa5.9□□□□□ -1.47
CPNE8-202ENST00000360449 NR6A1Q15406 480 aa5.9□□□□□ -1.47
CPNE8-202ENST00000360449 RNF135Q8IUD6 432 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms