RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CDAN1Q8IWY9 1227 aa6.94□□□□□ -1.3
ATXN3-202ENST00000359366 ESF1Q9H501 851 aaKnown RBP6.94□□□□□ -1.3
ATXN3-202ENST00000359366 PIK3C2BO00750 1634 aa6.94□□□□□ -1.3
ATXN3-202ENST00000359366 LAMC1P11047 1609 aa6.94□□□□□ -1.3
ATXN3-202ENST00000359366 MYOM2P54296 1465 aa6.93□□□□□ -1.3
ATXN3-202ENST00000359366 ARHGAP31Q2M1Z3 1444 aa6.93□□□□□ -1.3
ATXN3-202ENST00000359366 ZC3H13Q5T200 1668 aaKnown RBP6.93□□□□□ -1.3
ATXN3-202ENST00000359366 ERVK-7P63135 1459 aa6.93□□□□□ -1.3
ATXN3-202ENST00000359366 PIK3C2GO75747 1445 aa6.93□□□□□ -1.3
ATXN3-202ENST00000359366 C14orf93Q9H972 538 aaKnown RBP6.93□□□□□ -1.3
ATXN3-202ENST00000359366 NEXMIFQ5QGS0 1516 aa6.93□□□□□ -1.3
ATXN3-202ENST00000359366 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
ATXN3-202ENST00000359366 NRXN1Q9ULB1 1477 aa6.92□□□□□ -1.3
ATXN3-202ENST00000359366 ZMYM3Q14202 1370 aa6.92□□□□□ -1.3
ATXN3-202ENST00000359366 VGFO15240 615 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-202ENST00000359366 PER1O15534 1290 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-202ENST00000359366 ZNF579Q8NAF0 562 aaKnown RBP6.92□□□□□ -1.3
ATXN3-202ENST00000359366 TMEM131LA2VDJ0 1609 aa6.92□□□□□ -1.3
ATXN3-202ENST00000359366 AGLP35573 1532 aa6.91□□□□□ -1.3
ATXN3-202ENST00000359366 CENPJQ9HC77 1338 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-202ENST00000359366 PRR29P0C7W0 189 aa6.91□□□□□ -1.3
ATXN3-202ENST00000359366 TMC1Q8TDI8 760 aa6.91□□□□□ -1.3
ATXN3-202ENST00000359366 NEURL4Q96JN8 1562 aa6.9□□□□□ -1.3
ATXN3-202ENST00000359366 STAC3Q96MF2 364 aa6.9□□□□□ -1.3
ATXN3-202ENST00000359366 SALL2Q9Y467 1007 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-202ENST00000359366 EIF3AQ14152 1382 aaKnown RBP6.9□□□□□ -1.3
ATXN3-202ENST00000359366 RPGRIP1LQ68CZ1 1315 aa6.9□□□□□ -1.3
ATXN3-202ENST00000359366 KIAA1210Q9ULL0 1709 aa6.9□□□□□ -1.31
ATXN3-202ENST00000359366 ADGRB1O14514 1584 aa6.9□□□□□ -1.31
ATXN3-202ENST00000359366 REREQ9P2R6 1566 aa6.9□□□□□ -1.31
ATXN3-202ENST00000359366 BCANQ96GW7 911 aa6.9□□□□□ -1.31
ATXN3-202ENST00000359366 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
ATXN3-202ENST00000359366 KTN1Q86UP2 1357 aaKnown RBP6.89□□□□□ -1.31
ATXN3-202ENST00000359366 MINK1Q8N4C8 1332 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-202ENST00000359366 CABP2Q9NPB3 220 aa6.89□□□□□ -1.31
ATXN3-202ENST00000359366 ASXL1Q8IXJ9 1541 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 CARD14Q9BXL6 1004 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 KNSTRNQ9Y448 316 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 A2ML1A8K2U0 1454 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 MYOM1P52179 1685 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 QRICH2Q9H0J4 1663 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 TNNT2P45379 298 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-202ENST00000359366 IRX6P78412 446 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-202ENST00000359366 WAPLQ7Z5K2 1190 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 PRAM1Q96QH2 718 aa6.88□□□□□ -1.31
ATXN3-202ENST00000359366 FARP1Q9Y4F1 1045 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-202ENST00000359366 MYBBP1AQ9BQG0 1328 aaKnown RBP6.88□□□□□ -1.31
ATXN3-202ENST00000359366 PNISRQ8TF01 805 aaKnown RBP6.87□□□□□ -1.31
ATXN3-202ENST00000359366 RIMS2Q9UQ26 1411 aa6.87□□□□□ -1.31
ATXN3-202ENST00000359366 SPATA31D1Q6ZQQ2 1576 aa6.87□□□□□ -1.31
ATXN3-202ENST00000359366 ATF5Q9Y2D1 282 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-202ENST00000359366 KDM5AP29375 1690 aaKnown RBP6.87□□□□□ -1.31
ATXN3-202ENST00000359366 PARD3Q8TEW0 1356 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 TNRQ92752 1358 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 MMRN1Q13201 1228 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 RALBP1Q15311 655 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 CDCA8Q53HL2 280 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 AMER1Q5JTC6 1135 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-202ENST00000359366 POGKQ9P215 609 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 SETBP1Q9Y6X0 1596 aa6.86□□□□□ -1.31
ATXN3-202ENST00000359366 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-202ENST00000359366 SRPK2P78362 688 aaKnown RBP6.86□□□□□ -1.31
ATXN3-202ENST00000359366 PLEKHH1Q9ULM0 1364 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 ALKQ9UM73 1620 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 FKBP8Q14318 412 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 TXNDC2Q86VQ3 553 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 SUPT16HQ9Y5B9 1047 aaKnown RBP6.85□□□□□ -1.31
ATXN3-202ENST00000359366 PTPRMP28827 1452 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 YTHDC2Q9H6S0 1430 aaKnown RBP6.85□□□□□ -1.31
ATXN3-202ENST00000359366 ATXN8OSP0DMR3 200 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 LTKP29376 864 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 NLRP13Q86W25 1043 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 SCUBE2Q9NQ36 999 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 METP08581 1390 aa6.85□□□□□ -1.31
ATXN3-202ENST00000359366 TULP4Q9NRJ4 1543 aa6.84□□□□□ -1.31
ATXN3-202ENST00000359366 GALR2O43603 387 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-202ENST00000359366 SLC26A8Q96RN1 970 aa6.84□□□□□ -1.31
ATXN3-202ENST00000359366 MYO3AQ8NEV4 1616 aa6.84□□□□□ -1.31
ATXN3-202ENST00000359366 PPP2R1AP30153 589 aa6.84□□□□□ -1.31
ATXN3-202ENST00000359366 NCKAP5LQ9HCH0 1330 aa6.84□□□□□ -1.31
ATXN3-202ENST00000359366 ZFYVE9O95405 1425 aa6.84□□□□□ -1.32
ATXN3-202ENST00000359366 NUTM2FA1L443 756 aa6.83□□□□□ -1.32
ATXN3-202ENST00000359366 ZRANB1Q9UGI0 708 aa6.83□□□□□ -1.32
ATXN3-202ENST00000359366 EVC2Q86UK5 1308 aa6.83□□□□□ -1.32
ATXN3-202ENST00000359366 BRD4O60885 1362 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-202ENST00000359366 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
ATXN3-202ENST00000359366 C3P01024 1663 aa6.83□□□□□ -1.32
ATXN3-202ENST00000359366 FER1L4A9Z1Z3 1794 aa6.83□□□□□ -1.32
ATXN3-202ENST00000359366 ERICH6BQ5W0A0 696 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 CDK19Q9BWU1 502 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 ZBED9Q6R2W3 1325 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 ADAMTS8Q9UP79 889 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 NRXN3Q9Y4C0 1643 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 UBR1Q8IWV7 1749 aa6.82□□□□□ -1.32
ATXN3-202ENST00000359366 TMEM2Q9UHN6 1383 aa6.81□□□□□ -1.32
ATXN3-202ENST00000359366 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
ATXN3-202ENST00000359366 FBLN1P23142 703 aa6.81□□□□□ -1.32
ATXN3-202ENST00000359366 ARXQ96QS3 562 aa6.81□□□□□ -1.32
ATXN3-202ENST00000359366 CABP1Q9NZU7 370 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms