RNA–Protein interactions for RNA: ENST00000358951.6

RAB3GAP2-202, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP2, Length 7,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-202ENST00000358951 TPM1P09493 284 aa13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 EXOSC9Q06265 439 aaKnown RBP13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 PDE3AQ14432 1141 aa13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 MINK1Q8N4C8 1332 aaPredicted RBP13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 FIBPO43427 364 aa13.36□□□□□ -0.27
RAB3GAP2-202ENST00000358951 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 PDILTQ8N807 584 aa13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 RABEP1Q15276 862 aa13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 CCDC70Q6NSX1 233 aa13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 ZSCAN30Q86W11 494 aa13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
RAB3GAP2-202ENST00000358951 HDGFP51858 240 aaKnown RBP13.34□□□□□ -0.27
RAB3GAP2-202ENST00000358951 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
RAB3GAP2-202ENST00000358951 PCMTD1Q96MG8 357 aaPredicted RBP13.34□□□□□ -0.27
RAB3GAP2-202ENST00000358951 IGF1RP08069 1367 aa13.34□□□□□ -0.27
RAB3GAP2-202ENST00000358951 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
RAB3GAP2-202ENST00000358951 SYCE3A1L190 88 aa13.33□□□□□ -0.27
RAB3GAP2-202ENST00000358951 SMC2O95347 1197 aa13.33□□□□□ -0.27
RAB3GAP2-202ENST00000358951 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.27
RAB3GAP2-202ENST00000358951 COG3Q96JB2 828 aa13.33□□□□□ -0.27
RAB3GAP2-202ENST00000358951 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CCDC73Q6ZRK6 1079 aa13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CFTRP13569 1480 aa13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 KDM4AO75164 1064 aa13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 MTHFSP49914 203 aa13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 ZHX1Q9UKY1 873 aaPredicted RBP13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
RAB3GAP2-202ENST00000358951 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
RAB3GAP2-202ENST00000358951 C9orf78Q9NZ63 289 aaPredicted RBP13.31□□□□□ -0.28
RAB3GAP2-202ENST00000358951 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CHD1LQ86WJ1 897 aa13.31□□□□□ -0.28
RAB3GAP2-202ENST00000358951 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 PDCL3Q9H2J4 239 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 GNAI1P63096 354 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 HSP90B2PQ58FF3 399 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 APPP05067 770 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 TRIM29Q14134 588 aa13.3□□□□□ -0.28
RAB3GAP2-202ENST00000358951 NAT10Q9H0A0 1025 aaKnown RBP13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CCDC112Q8NEF3 446 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 AK7Q96M32 723 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 RUFY1Q96T51 708 aa13.29□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CPLX1O14810 134 aa13.28□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CHMP4AQ9BY43 222 aa13.28□□□□□ -0.28
RAB3GAP2-202ENST00000358951 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
RAB3GAP2-202ENST00000358951 ACBD3Q9H3P7 528 aa13.28□□□□□ -0.28
RAB3GAP2-202ENST00000358951 SLFN5Q08AF3 891 aa13.27□□□□□ -0.28
RAB3GAP2-202ENST00000358951 TNPO1Q92973 898 aaKnown RBP13.27□□□□□ -0.28
RAB3GAP2-202ENST00000358951 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 LEKR1Q6ZMV7 388 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 ANKRD50Q9ULJ7 1429 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 SSFA2P28290 1259 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 CCDC192P0DO97 292 aa13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 AKAP17AQ02040 695 aaKnown RBP13.27□□□□□ -0.29
RAB3GAP2-202ENST00000358951 TNMDQ9H2S6 317 aa13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 ERC2O15083 957 aa13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 HOOK1Q9UJC3 728 aaKnown RBP13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 STK3Q13188 491 aa13.26□□□□□ -0.29
RAB3GAP2-202ENST00000358951 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
RAB3GAP2-202ENST00000358951 HFM1A2PYH4 1435 aa13.25□□□□□ -0.29
RAB3GAP2-202ENST00000358951 MCM2P49736 904 aa13.25□□□□□ -0.29
RAB3GAP2-202ENST00000358951 PANK2Q9BZ23 570 aa13.25□□□□□ -0.29
RAB3GAP2-202ENST00000358951 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
RAB3GAP2-202ENST00000358951 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
RAB3GAP2-202ENST00000358951 G3BP1Q13283 466 aaKnown RBP eCLIP13.25□□□□□ -0.298e-6■■■■□ 20.2
RAB3GAP2-202ENST00000358951 H0YHG0 523 aa13.24□□□□□ -0.29
RAB3GAP2-202ENST00000358951 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
RAB3GAP2-202ENST00000358951 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
RAB3GAP2-202ENST00000358951 IPO7O95373 1038 aaKnown RBP13.24□□□□□ -0.29
RAB3GAP2-202ENST00000358951 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms