RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PANK2Q9BZ23 570 aa7.29□□□□□ -1.24
VPS13B-203ENST00000358544 NAT10Q9H0A0 1025 aaKnown RBP7.29□□□□□ -1.24
VPS13B-203ENST00000358544 ADAMTS8Q9UP79 889 aa7.29□□□□□ -1.24
VPS13B-203ENST00000358544 SPDYE4A6NLX3 237 aa7.29□□□□□ -1.24
VPS13B-203ENST00000358544 NUP155O75694 1391 aa7.29□□□□□ -1.24
VPS13B-203ENST00000358544 TNPO1Q92973 898 aaKnown RBP7.29□□□□□ -1.24
VPS13B-203ENST00000358544 SYCE3A1L190 88 aa7.29□□□□□ -1.24
VPS13B-203ENST00000358544 AXDND1Q5T1B0 1012 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-203ENST00000358544 PLCD3Q8N3E9 789 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 RRP12Q5JTH9 1297 aaKnown RBP7.28□□□□□ -1.24
VPS13B-203ENST00000358544 CAGE1Q8TC20 777 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 LNPKQ9C0E8 428 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 EIF3JO75822 258 aaKnown RBP7.28□□□□□ -1.24
VPS13B-203ENST00000358544 RAPGEF2Q9Y4G8 1499 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 TXLNBQ8N3L3 684 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 RUFY2Q8WXA3 655 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 FIBPO43427 364 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 PNISRQ8TF01 805 aaKnown RBP7.28□□□□□ -1.24
VPS13B-203ENST00000358544 FAM107BQ9H098 131 aa7.28□□□□□ -1.24
VPS13B-203ENST00000358544 RILPL2Q969X0 211 aa7.27□□□□□ -1.24
VPS13B-203ENST00000358544 MYO18AQ92614 2054 aaKnown RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 C14orf37Q86TY3 774 aa7.27□□□□□ -1.25
VPS13B-203ENST00000358544 GPATCH11Q8N954 259 aa7.27□□□□□ -1.25
VPS13B-203ENST00000358544 API5Q9BZZ5 524 aaKnown RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 IPO4Q8TEX9 1081 aaKnown RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 HDGFL2Q7Z4V5 671 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 UBXN4Q92575 508 aa7.27□□□□□ -1.25
VPS13B-203ENST00000358544 ZFP91Q96JP5 570 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-203ENST00000358544 ANKRD20A12PQ8NF67 263 aa7.27□□□□□ -1.25
VPS13B-203ENST00000358544 SSFA2P28290 1259 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 CCDC184Q52MB2 194 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 HS1BP3Q53T59 392 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 CECR2Q9BXF3 1484 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 ZKSCAN1P17029 563 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-203ENST00000358544 PES1O00541 588 aaKnown RBP7.26□□□□□ -1.25
VPS13B-203ENST00000358544 POLR3GO15318 223 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-203ENST00000358544 KANK1Q14678 1352 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 PDILTQ8N807 584 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 RTF1Q92541 710 aaKnown RBP7.26□□□□□ -1.25
VPS13B-203ENST00000358544 TNMDQ9H2S6 317 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 CTR9Q6PD62 1173 aa7.26□□□□□ -1.25
VPS13B-203ENST00000358544 FAM186AA6NE01 2351 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 NEK4P51957 841 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 FHOD3Q2V2M9 1422 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 SKAP1Q86WV1 359 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 WDR33Q9C0J8 1336 aaKnown RBP7.25□□□□□ -1.25
VPS13B-203ENST00000358544 TMCO3Q6UWJ1 677 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 CCDC102AQ96A19 550 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 MCM2P49736 904 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 CUX2O14529 1486 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 FOSBP53539 338 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 SLC4A10Q6U841 1118 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 RASSF8Q8NHQ8 419 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 HDAC5Q9UQL6 1122 aa7.25□□□□□ -1.25
VPS13B-203ENST00000358544 RRBP1Q9P2E9 1410 aaKnown RBP7.25□□□□□ -1.25
VPS13B-203ENST00000358544 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 ROCK1Q13464 1354 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 CT47B1P0C2W7 299 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-203ENST00000358544 WDR97A6NE52 1622 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 CEP57L1Q8IYX8 460 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 INCENPQ9NQS7 918 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 MYH10P35580 1976 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 SRPK2P78362 688 aaKnown RBP7.24□□□□□ -1.25
VPS13B-203ENST00000358544 CCDC27Q2M243 656 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 MIA2Q96PC5 1412 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 CLSTN1O94985 981 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 DDX11Q96FC9 970 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 HOOK1Q9UJC3 728 aaKnown RBP7.24□□□□□ -1.25
VPS13B-203ENST00000358544 KIF20AO95235 890 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 TBC1D32Q96NH3 1257 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 OGFRQ9NZT2 677 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 NUMA1Q14980 2115 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 KINO60870 393 aaKnown RBP7.24□□□□□ -1.25
VPS13B-203ENST00000358544 TERF1P54274 439 aa7.24□□□□□ -1.25
VPS13B-203ENST00000358544 BAZ1AQ9NRL2 1556 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-203ENST00000358544 KIF18AQ8NI77 898 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 CCDC183Q5T5S1 534 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 FILIP1Q7Z7B0 1213 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 NINQ8N4C6 2090 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 ZSCAN23Q3MJ62 389 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 FAM193AP78312 1265 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 VGLL3A8MV65 326 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 RUNDC1Q96C34 613 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 TTLL5Q6EMB2 1281 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 C16orf45Q96MC5 204 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-203ENST00000358544 CENPHQ9H3R5 247 aa7.23□□□□□ -1.25
VPS13B-203ENST00000358544 DIDO1Q9BTC0 2240 aaKnown RBP7.23□□□□□ -1.25
VPS13B-203ENST00000358544 PDCP20941 246 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 SAFB2Q14151 953 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13B-203ENST00000358544 USP25Q9UHP3 1055 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 POTEB2H3BUK9 544 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 SKIDA1Q1XH10 827 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 TRIM34Q9BYJ4 488 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 LMAN1P49257 510 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 GOLGA6L7A0A1B0GV03 622 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 CPLX1O14810 134 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 CBFA2T2O43439 604 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 IBSPP21815 317 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms