RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 TULP1O00294 542 aaPredicted RBP18.02■□□□□ 0.48
SLC6A20-202ENST00000358525 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
SLC6A20-202ENST00000358525 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
SLC6A20-202ENST00000358525 RAPGEF3O95398 923 aa18.02■□□□□ 0.47
SLC6A20-202ENST00000358525 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
SLC6A20-202ENST00000358525 CDK19Q9BWU1 502 aa18.01■□□□□ 0.47
SLC6A20-202ENST00000358525 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
SLC6A20-202ENST00000358525 PSME1Q06323 249 aa18■□□□□ 0.47
SLC6A20-202ENST00000358525 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
SLC6A20-202ENST00000358525 BACH2Q9BYV9 841 aa18■□□□□ 0.47
SLC6A20-202ENST00000358525 SKOR2Q2VWA4 1001 aaPredicted RBP17.99■□□□□ 0.47
SLC6A20-202ENST00000358525 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
SLC6A20-202ENST00000358525 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
SLC6A20-202ENST00000358525 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
SLC6A20-202ENST00000358525 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
SLC6A20-202ENST00000358525 C1orf115Q9H7X2 142 aa17.97■□□□□ 0.47
SLC6A20-202ENST00000358525 ANO2Q9NQ90 1003 aa17.97■□□□□ 0.47
SLC6A20-202ENST00000358525 WDR63Q8IWG1 891 aa17.97■□□□□ 0.47
SLC6A20-202ENST00000358525 NSD3Q9BZ95 1437 aa17.96■□□□□ 0.47
SLC6A20-202ENST00000358525 PHF14O94880 888 aa17.96■□□□□ 0.47
SLC6A20-202ENST00000358525 NLRP6P59044 892 aa17.96■□□□□ 0.46
SLC6A20-202ENST00000358525 SLC52A1Q9NWF4 448 aa17.96■□□□□ 0.46
SLC6A20-202ENST00000358525 UGGT2Q9NYU1 1516 aa17.95■□□□□ 0.46
SLC6A20-202ENST00000358525 SLFN5Q08AF3 891 aa17.95■□□□□ 0.46
SLC6A20-202ENST00000358525 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
SLC6A20-202ENST00000358525 TWISTNBQ3B726 338 aaPredicted RBP17.95■□□□□ 0.46
SLC6A20-202ENST00000358525 TTC5Q8N0Z6 440 aa17.95■□□□□ 0.46
SLC6A20-202ENST00000358525 RPGRIP1LQ68CZ1 1315 aa17.94■□□□□ 0.46
SLC6A20-202ENST00000358525 CDC45O75419 566 aa17.94■□□□□ 0.46
SLC6A20-202ENST00000358525 IFIT2P09913 472 aaKnown RBP17.94■□□□□ 0.46
SLC6A20-202ENST00000358525 ARID3AQ99856 593 aa17.94■□□□□ 0.46
SLC6A20-202ENST00000358525 WWC1Q8IX03 1113 aa17.93■□□□□ 0.46
SLC6A20-202ENST00000358525 RUFY2Q8WXA3 655 aa17.92■□□□□ 0.46
SLC6A20-202ENST00000358525 ISY1Q9ULR0 285 aaKnown RBP17.92■□□□□ 0.46
SLC6A20-202ENST00000358525 GPATCH8Q9UKJ3 1502 aaKnown RBP17.92■□□□□ 0.46
SLC6A20-202ENST00000358525 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
SLC6A20-202ENST00000358525 C20orf194Q5TEA3 1177 aa17.91■□□□□ 0.46
SLC6A20-202ENST00000358525 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
SLC6A20-202ENST00000358525 H3BQV1 296 aa17.9■□□□□ 0.46
SLC6A20-202ENST00000358525 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
SLC6A20-202ENST00000358525 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 SULT6B1Q6IMI4 303 aa17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 ATP6V1DQ9Y5K8 247 aa17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 SKAP1Q86WV1 359 aa17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 ZKSCAN1P17029 563 aaPredicted RBP17.89■□□□□ 0.45
SLC6A20-202ENST00000358525 RTEL1-TNFRSF6BF6WH68 1400 aa17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 ADGRF5Q8IZF2 1346 aa17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 UBTFL1P0CB47 393 aaPredicted RBP17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 KIF3AQ9Y496 699 aa17.88■□□□□ 0.45
SLC6A20-202ENST00000358525 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
SLC6A20-202ENST00000358525 AIMP1Q12904 312 aaKnown RBP17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 EVA1CP58658 441 aa17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 TPM4P67936 248 aa17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 GCC1Q96CN9 775 aa17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 NUCB2P80303 420 aa17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 SF3A1Q15459 793 aaKnown RBP17.86■□□□□ 0.45
SLC6A20-202ENST00000358525 ADGRL1O94910 1474 aa17.85■□□□□ 0.45
SLC6A20-202ENST00000358525 CCDC30Q5VVM6 783 aa17.85■□□□□ 0.45
SLC6A20-202ENST00000358525 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 HSP90AB4PQ58FF6 505 aa17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 NUP153P49790 1475 aaKnown RBP17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 RAPGEF4Q8WZA2 1011 aa17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 FAM135AQ9P2D6 1515 aa17.84■□□□□ 0.45
SLC6A20-202ENST00000358525 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.45
SLC6A20-202ENST00000358525 MSH5O43196 834 aa17.83■□□□□ 0.45
SLC6A20-202ENST00000358525 GNAI3P08754 354 aa17.83■□□□□ 0.44
SLC6A20-202ENST00000358525 RIC3Q7Z5B4 369 aa17.82■□□□□ 0.44
SLC6A20-202ENST00000358525 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
SLC6A20-202ENST00000358525 ERC2O15083 957 aa17.82■□□□□ 0.44
SLC6A20-202ENST00000358525 FCHSD2O94868 740 aa17.81■□□□□ 0.44
SLC6A20-202ENST00000358525 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
SLC6A20-202ENST00000358525 SCAF11Q99590 1463 aaKnown RBP17.81■□□□□ 0.44
SLC6A20-202ENST00000358525 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
SLC6A20-202ENST00000358525 GTF2E1P29083 439 aaPredicted RBP17.81■□□□□ 0.44
SLC6A20-202ENST00000358525 SMC3Q9UQE7 1217 aa17.8■□□□□ 0.44
SLC6A20-202ENST00000358525 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
SLC6A20-202ENST00000358525 ESCO1Q5FWF5 840 aa17.8■□□□□ 0.44
SLC6A20-202ENST00000358525 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
SLC6A20-202ENST00000358525 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
SLC6A20-202ENST00000358525 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
SLC6A20-202ENST00000358525 SLC26A8Q96RN1 970 aa17.79■□□□□ 0.44
SLC6A20-202ENST00000358525 TRAK2O60296 914 aa17.79■□□□□ 0.44
SLC6A20-202ENST00000358525 TMEM57Q8N5G2 664 aa17.79■□□□□ 0.44
SLC6A20-202ENST00000358525 RARSP54136 660 aaKnown RBP17.79■□□□□ 0.44
SLC6A20-202ENST00000358525 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms