RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 EVC2Q86UK5 1308 aa19.07■□□□□ 0.64
STRN3-201ENST00000355683 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
STRN3-201ENST00000355683 TRIM6-TRIM34B2RNG4 842 aa19.07■□□□□ 0.64
STRN3-201ENST00000355683 PER1O15534 1290 aaPredicted RBP19.06■□□□□ 0.64
STRN3-201ENST00000355683 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
STRN3-201ENST00000355683 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
STRN3-201ENST00000355683 MPNDQ8N594 471 aa19.05■□□□□ 0.64
STRN3-201ENST00000355683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
STRN3-201ENST00000355683 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
STRN3-201ENST00000355683 EID1Q9Y6B2 187 aa19.05■□□□□ 0.64
STRN3-201ENST00000355683 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
STRN3-201ENST00000355683 FBXO31Q5XUX0 539 aaPredicted RBP19.04■□□□□ 0.64
STRN3-201ENST00000355683 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
STRN3-201ENST00000355683 NAP1L2Q9ULW6 460 aaPredicted RBP19.03■□□□□ 0.64
STRN3-201ENST00000355683 KDM5BQ9UGL1 1544 aa19.03■□□□□ 0.64
STRN3-201ENST00000355683 CEBPAP49715 358 aaPredicted RBP19.03■□□□□ 0.64
STRN3-201ENST00000355683 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
STRN3-201ENST00000355683 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
STRN3-201ENST00000355683 PLEKHH1Q9ULM0 1364 aa19.03■□□□□ 0.64
STRN3-201ENST00000355683 NGDNQ8NEJ9 315 aaKnown RBP19.02■□□□□ 0.64
STRN3-201ENST00000355683 RILPL2Q969X0 211 aa19.02■□□□□ 0.64
STRN3-201ENST00000355683 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.63
STRN3-201ENST00000355683 C22orf23Q9BZE7 217 aa19.02■□□□□ 0.63
STRN3-201ENST00000355683 RLBP1P12271 317 aa19.01■□□□□ 0.63
STRN3-201ENST00000355683 L1TD1Q5T7N2 865 aaKnown RBP19.01■□□□□ 0.63
STRN3-201ENST00000355683 CARD14Q9BXL6 1004 aa19.01■□□□□ 0.63
STRN3-201ENST00000355683 NGEFQ8N5V2 710 aa19.01■□□□□ 0.63
STRN3-201ENST00000355683 GOLGA6L3A6NEY3 463 aa19■□□□□ 0.63
STRN3-201ENST00000355683 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
STRN3-201ENST00000355683 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
STRN3-201ENST00000355683 KCNJ4P48050 445 aa18.99■□□□□ 0.63
STRN3-201ENST00000355683 AMPHP49418 695 aa18.98■□□□□ 0.63
STRN3-201ENST00000355683 BCL11BQ9C0K0 894 aaPredicted RBP18.98■□□□□ 0.63
STRN3-201ENST00000355683 SSH1Q8WYL5 1049 aa18.98■□□□□ 0.63
STRN3-201ENST00000355683 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
STRN3-201ENST00000355683 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
STRN3-201ENST00000355683 TEX14Q8IWB6 1497 aa18.96■□□□□ 0.63
STRN3-201ENST00000355683 NSD3Q9BZ95 1437 aa18.96■□□□□ 0.63
STRN3-201ENST00000355683 RARSP54136 660 aaKnown RBP18.96■□□□□ 0.63
STRN3-201ENST00000355683 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
STRN3-201ENST00000355683 FAM83GA6ND36 823 aa18.95■□□□□ 0.62
STRN3-201ENST00000355683 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
STRN3-201ENST00000355683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
STRN3-201ENST00000355683 PZPP20742 1482 aa18.95■□□□□ 0.62
STRN3-201ENST00000355683 CASC1Q6TDU7 716 aa18.94■□□□□ 0.62
STRN3-201ENST00000355683 NCKAP5LQ9HCH0 1330 aa18.94■□□□□ 0.62
STRN3-201ENST00000355683 MSNP26038 577 aaKnown RBP18.94■□□□□ 0.62
STRN3-201ENST00000355683 COG3Q96JB2 828 aa18.94■□□□□ 0.62
STRN3-201ENST00000355683 ZRANB1Q9UGI0 708 aa18.94■□□□□ 0.62
STRN3-201ENST00000355683 CHMP3Q9Y3E7 222 aa18.94■□□□□ 0.62
STRN3-201ENST00000355683 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
STRN3-201ENST00000355683 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
STRN3-201ENST00000355683 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
STRN3-201ENST00000355683 ZNF518AQ6AHZ1 1483 aa18.93■□□□□ 0.62
STRN3-201ENST00000355683 DTNBO60941 627 aa18.92■□□□□ 0.62
STRN3-201ENST00000355683 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
STRN3-201ENST00000355683 ZCCHC11Q5TAX3 1644 aaKnown RBP18.92■□□□□ 0.62
STRN3-201ENST00000355683 DDX49Q9Y6V7 483 aaKnown RBP18.92■□□□□ 0.62
STRN3-201ENST00000355683 IDI1Q13907 227 aa18.91■□□□□ 0.62
STRN3-201ENST00000355683 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
STRN3-201ENST00000355683 SMARCA5O60264 1052 aaPredicted RBP18.9■□□□□ 0.62
STRN3-201ENST00000355683 POGZQ7Z3K3 1410 aa18.9■□□□□ 0.62
STRN3-201ENST00000355683 ABCC10Q5T3U5 1492 aa18.9■□□□□ 0.62
STRN3-201ENST00000355683 TMPOP42166 694 aaKnown RBP18.89■□□□□ 0.61
STRN3-201ENST00000355683 TSHZ3Q63HK5 1081 aa18.89■□□□□ 0.61
STRN3-201ENST00000355683 MCM10Q7L590 875 aa18.89■□□□□ 0.61
STRN3-201ENST00000355683 MAP4K4O95819 1239 aaPredicted RBP18.88■□□□□ 0.61
STRN3-201ENST00000355683 NME9Q86XW9 330 aa18.88■□□□□ 0.61
STRN3-201ENST00000355683 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
STRN3-201ENST00000355683 TCOF1Q13428 1488 aaKnown RBP18.88■□□□□ 0.61
STRN3-201ENST00000355683 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
STRN3-201ENST00000355683 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
STRN3-201ENST00000355683 A2MP01023 1474 aa18.87■□□□□ 0.61
STRN3-201ENST00000355683 TRIM27P14373 513 aa18.87■□□□□ 0.61
STRN3-201ENST00000355683 FKBP5Q13451 457 aaPredicted RBP18.87■□□□□ 0.61
STRN3-201ENST00000355683 STK31Q9BXU1 1019 aa18.87■□□□□ 0.61
STRN3-201ENST00000355683 MVPQ14764 893 aaKnown RBP18.86■□□□□ 0.61
STRN3-201ENST00000355683 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
STRN3-201ENST00000355683 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
STRN3-201ENST00000355683 TSPOAP1O95153 1857 aa18.86■□□□□ 0.61
STRN3-201ENST00000355683 SLC52A1Q9NWF4 448 aa18.86■□□□□ 0.61
STRN3-201ENST00000355683 FGD1P98174 961 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 UBE2Q2Q8WVN8 375 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 TWISTNBQ3B726 338 aaPredicted RBP18.85■□□□□ 0.61
STRN3-201ENST00000355683 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
STRN3-201ENST00000355683 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
STRN3-201ENST00000355683 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
STRN3-201ENST00000355683 XPCQ01831 940 aaPredicted RBP18.84■□□□□ 0.61
STRN3-201ENST00000355683 MCTP1Q6DN14 999 aa18.84■□□□□ 0.61
STRN3-201ENST00000355683 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
STRN3-201ENST00000355683 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
STRN3-201ENST00000355683 F6X3S4 739 aa18.84■□□□□ 0.61
STRN3-201ENST00000355683 TBC1D2Q9BYX2 928 aa18.84■□□□□ 0.61
STRN3-201ENST00000355683 HSP90AA2PQ14568 343 aaPredicted RBP18.83■□□□□ 0.61
STRN3-201ENST00000355683 ANO2Q9NQ90 1003 aa18.83■□□□□ 0.61
STRN3-201ENST00000355683 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms