RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 C1orf167Q5SNV9 1468 aa27.18■■□□□ 1.94
VPS72-201ENST00000354473 AHDC1Q5TGY3 1603 aaPredicted RBP27.18■■□□□ 1.94
VPS72-201ENST00000354473 COL16A1Q07092 1604 aaPredicted RBP27.17■■□□□ 1.94
VPS72-201ENST00000354473 PRAM1Q96QH2 718 aa27.16■■□□□ 1.94
VPS72-201ENST00000354473 TRAK1Q9UPV9 953 aa27.16■■□□□ 1.94
VPS72-201ENST00000354473 MED1Q15648 1581 aaPredicted RBP27.15■■□□□ 1.94
VPS72-201ENST00000354473 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
VPS72-201ENST00000354473 SAFB2Q14151 953 aaKnown RBP eCLIP27.14■■□□□ 1.93
VPS72-201ENST00000354473 NHSL1Q5SYE7 1610 aa27.14■■□□□ 1.93
VPS72-201ENST00000354473 DISP3Q9P2K9 1392 aa27.13■■□□□ 1.93
VPS72-201ENST00000354473 POGKQ9P215 609 aa27.13■■□□□ 1.93
VPS72-201ENST00000354473 FMN2Q9NZ56 1722 aa27.12■■□□□ 1.93
VPS72-201ENST00000354473 ARHGEF28Q8N1W1 1705 aaKnown RBP27.11■■□□□ 1.93
VPS72-201ENST00000354473 ORAI2Q96SN7 254 aa27.09■■□□□ 1.93
VPS72-201ENST00000354473 ADGRB2O60241 1585 aa27.07■■□□□ 1.92
VPS72-201ENST00000354473 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
VPS72-201ENST00000354473 NUTM2FA1L443 756 aa27.06■■□□□ 1.92
VPS72-201ENST00000354473 JCADQ9P266 1359 aa27.05■■□□□ 1.92
VPS72-201ENST00000354473 TRPM1Q7Z4N2 1603 aa27.05■■□□□ 1.92
VPS72-201ENST00000354473 DDX17Q92841 729 aaKnown RBP27.05■■□□□ 1.92
VPS72-201ENST00000354473 TONSLQ96HA7 1378 aa27.05■■□□□ 1.92
VPS72-201ENST00000354473 ESCO1Q5FWF5 840 aa27.03■■□□□ 1.92
VPS72-201ENST00000354473 MINK1Q8N4C8 1332 aaPredicted RBP27.02■■□□□ 1.92
VPS72-201ENST00000354473 SHPRHQ149N8 1683 aa27.01■■□□□ 1.91
VPS72-201ENST00000354473 HIRIP3Q9BW71 556 aaPredicted RBP27.01■■□□□ 1.91
VPS72-201ENST00000354473 RGPD8O14715 1765 aaPredicted RBP27.01■■□□□ 1.91
VPS72-201ENST00000354473 KIF1AQ12756 1690 aa26.98■■□□□ 1.91
VPS72-201ENST00000354473 USP32Q8NFA0 1604 aa26.96■■□□□ 1.91
VPS72-201ENST00000354473 ROCK2O75116 1388 aaKnown RBP26.96■■□□□ 1.91
VPS72-201ENST00000354473 ANKARQ7Z5J8 1434 aa26.95■■□□□ 1.9
VPS72-201ENST00000354473 NPHP3Q7Z494 1330 aa26.95■■□□□ 1.9
VPS72-201ENST00000354473 NBPF8Q3BBV2 869 aa26.94■■□□□ 1.9
VPS72-201ENST00000354473 LRRC59Q96AG4 307 aaKnown RBP26.94■■□□□ 1.9
VPS72-201ENST00000354473 SOS2Q07890 1332 aaPredicted RBP26.94■■□□□ 1.9
VPS72-201ENST00000354473 PHF23Q9BUL5 403 aaPredicted RBP26.93■■□□□ 1.9
VPS72-201ENST00000354473 EIF3AQ14152 1382 aaKnown RBP26.93■■□□□ 1.9
VPS72-201ENST00000354473 TULP4Q9NRJ4 1543 aa26.93■■□□□ 1.9
VPS72-201ENST00000354473 SPATA31A6Q5VVP1 1343 aa26.93■■□□□ 1.9
VPS72-201ENST00000354473 FOXO3O43524 673 aa26.92■■□□□ 1.9
VPS72-201ENST00000354473 PXDNQ92626 1479 aa26.92■■□□□ 1.9
VPS72-201ENST00000354473 WASLO00401 505 aaPredicted RBP26.91■■□□□ 1.9
VPS72-201ENST00000354473 QRICH2Q9H0J4 1663 aa26.9■■□□□ 1.9
VPS72-201ENST00000354473 LRP6O75581 1613 aa26.9■■□□□ 1.9
VPS72-201ENST00000354473 XPCQ01831 940 aaPredicted RBP26.9■■□□□ 1.9
VPS72-201ENST00000354473 PNPLA6Q8IY17 1366 aa26.89■■□□□ 1.9
VPS72-201ENST00000354473 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.9
VPS72-201ENST00000354473 PHF8Q9UPP1 1060 aa26.89■■□□□ 1.89
VPS72-201ENST00000354473 PRR36Q9H6K5 1346 aa26.87■■□□□ 1.89
VPS72-201ENST00000354473 RALGAPBQ86X10 1494 aa26.87■■□□□ 1.89
VPS72-201ENST00000354473 GPRASP1Q5JY77 1395 aa26.87■■□□□ 1.89
VPS72-201ENST00000354473 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
VPS72-201ENST00000354473 ITSN1Q15811 1721 aa26.84■■□□□ 1.89
VPS72-201ENST00000354473 ATP7BP35670 1465 aa26.84■■□□□ 1.89
VPS72-201ENST00000354473 NUTM2BA6NNL0 878 aaPredicted RBP26.84■■□□□ 1.89
VPS72-201ENST00000354473 NUTM2EB1AL46 878 aaPredicted RBP26.84■■□□□ 1.89
VPS72-201ENST00000354473 NUTM2AQ8IVF1 878 aaPredicted RBP26.84■■□□□ 1.89
VPS72-201ENST00000354473 CDK19Q9BWU1 502 aa26.83■■□□□ 1.89
VPS72-201ENST00000354473 MEX3CQ5U5Q3 659 aaKnown RBP26.82■■□□□ 1.88
VPS72-201ENST00000354473 ILDR2Q71H61 639 aa26.82■■□□□ 1.88
VPS72-201ENST00000354473 PMFBP1Q8TBY8 1022 aa26.82■■□□□ 1.88
VPS72-201ENST00000354473 COL22A1Q8NFW1 1626 aaPredicted RBP26.81■■□□□ 1.88
VPS72-201ENST00000354473 KRT28Q7Z3Y7 464 aa26.8■■□□□ 1.88
VPS72-201ENST00000354473 CARD11Q9BXL7 1154 aa26.8■■□□□ 1.88
VPS72-201ENST00000354473 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
VPS72-201ENST00000354473 NUDT16Q96DE0 195 aaKnown RBP26.79■■□□□ 1.88
VPS72-201ENST00000354473 TOPAZ1Q8N9V7 1692 aa26.79■■□□□ 1.88
VPS72-201ENST00000354473 RGS17Q9UGC6 210 aaPredicted RBP26.78■■□□□ 1.88
VPS72-201ENST00000354473 PSME1Q06323 249 aa26.77■■□□□ 1.88
VPS72-201ENST00000354473 SRPK2P78362 688 aaKnown RBP26.75■■□□□ 1.87
VPS72-201ENST00000354473 SPATA31A3Q5VYP0 1347 aa26.75■■□□□ 1.87
VPS72-201ENST00000354473 TNS3Q68CZ2 1445 aa26.74■■□□□ 1.87
VPS72-201ENST00000354473 TRPM3Q9HCF6 1732 aaPredicted RBP26.73■■□□□ 1.87
VPS72-201ENST00000354473 SBNO1A3KN83 1393 aa26.72■■□□□ 1.87
VPS72-201ENST00000354473 NGDNQ8NEJ9 315 aaKnown RBP26.72■■□□□ 1.87
VPS72-201ENST00000354473 CABP2Q9NPB3 220 aa26.71■■□□□ 1.87
VPS72-201ENST00000354473 TIMELESSQ9UNS1 1208 aa26.71■■□□□ 1.87
VPS72-201ENST00000354473 EVC2Q86UK5 1308 aa26.7■■□□□ 1.87
VPS72-201ENST00000354473 CCDC61Q9Y6R9 512 aa26.7■■□□□ 1.87
VPS72-201ENST00000354473 ADAMTS2O95450 1211 aa26.69■■□□□ 1.86
VPS72-201ENST00000354473 LMOD2Q6P5Q4 547 aa26.67■■□□□ 1.86
VPS72-201ENST00000354473 C8orf37Q96NL8 207 aa26.67■■□□□ 1.86
VPS72-201ENST00000354473 ARHGEF10O15013 1369 aa26.67■■□□□ 1.86
VPS72-201ENST00000354473 PPIP5K1Q6PFW1 1433 aa26.66■■□□□ 1.86
VPS72-201ENST00000354473 ALS2Q96Q42 1657 aa26.66■■□□□ 1.86
VPS72-201ENST00000354473 POLR3AO14802 1390 aaPredicted RBP26.66■■□□□ 1.86
VPS72-201ENST00000354473 SBNO2Q9Y2G9 1366 aa26.66■■□□□ 1.86
VPS72-201ENST00000354473 POTEAQ6S8J7 498 aa26.65■■□□□ 1.86
VPS72-201ENST00000354473 MARF1Q9Y4F3 1742 aaKnown RBP26.65■■□□□ 1.86
VPS72-201ENST00000354473 ACEP12821 1306 aa26.65■■□□□ 1.86
VPS72-201ENST00000354473 PLEKHG3A1L390 1219 aa26.65■■□□□ 1.86
VPS72-201ENST00000354473 AFF2P51816 1311 aa26.64■■□□□ 1.86
VPS72-201ENST00000354473 ABCA3Q99758 1704 aa26.64■■□□□ 1.85
VPS72-201ENST00000354473 ZNF772Q68DY9 489 aaPredicted RBP26.63■■□□□ 1.85
VPS72-201ENST00000354473 PLEKHG5O94827 1062 aa26.62■■□□□ 1.85
VPS72-201ENST00000354473 PAK3O75914 559 aaPredicted RBP26.61■■□□□ 1.85
VPS72-201ENST00000354473 NGLY1Q96IV0 654 aa26.61■■□□□ 1.85
VPS72-201ENST00000354473 HAP1P54257 671 aaPredicted RBP26.59■■□□□ 1.85
VPS72-201ENST00000354473 CABLES1Q8TDN4 633 aa26.59■■□□□ 1.85
VPS72-201ENST00000354473 CABP1Q9NZU7 370 aa26.59■■□□□ 1.85
VPS72-201ENST00000354473 ATAD2Q6PL18 1390 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms