RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
RFC1-201ENST00000349703 MKRN4PQ13434 485 aaPredicted RBP7.53□□□□□ -1.2
RFC1-201ENST00000349703 CRBNQ96SW2 442 aa7.52□□□□□ -1.2
RFC1-201ENST00000349703 IRX6P78412 446 aaPredicted RBP7.52□□□□□ -1.21
RFC1-201ENST00000349703 WWC2Q6AWC2 1192 aa7.52□□□□□ -1.21
RFC1-201ENST00000349703 TOP2AP11388 1531 aaKnown RBP7.52□□□□□ -1.21
RFC1-201ENST00000349703 BICDL1Q6ZP65 573 aa7.52□□□□□ -1.21
RFC1-201ENST00000349703 ZSWIM4Q9H7M6 989 aa7.52□□□□□ -1.21
RFC1-201ENST00000349703 HIC1Q14526 733 aa7.52□□□□□ -1.21
RFC1-201ENST00000349703 ABCC8Q09428 1581 aa7.52□□□□□ -1.21
RFC1-201ENST00000349703 RASA1P20936 1047 aa7.51□□□□□ -1.21
RFC1-201ENST00000349703 SULF1Q8IWU6 871 aa7.51□□□□□ -1.21
RFC1-201ENST00000349703 CECR2Q9BXF3 1484 aa7.51□□□□□ -1.21
RFC1-201ENST00000349703 WASHC4Q2M389 1173 aa7.51□□□□□ -1.21
RFC1-201ENST00000349703 CLGNO14967 610 aa7.51□□□□□ -1.21
RFC1-201ENST00000349703 TOMM22Q9NS69 142 aa7.51□□□□□ -1.21
RFC1-201ENST00000349703 LMOD3Q0VAK6 560 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 SLC4A10Q6U841 1118 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 PPP2R5AQ15172 486 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 WIZO95785 1651 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 IFRD2Q12894 506 aaPredicted RBP7.5□□□□□ -1.21
RFC1-201ENST00000349703 GLMNQ92990 594 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
RFC1-201ENST00000349703 MAGEB6P1A0A0J9YX57 407 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 ZCRB1Q8TBF4 217 aaKnown RBP7.49□□□□□ -1.21
RFC1-201ENST00000349703 SETD5Q9C0A6 1442 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 KIF21BO75037 1637 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 ZBTB33Q86T24 672 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 ATG3Q9NT62 314 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 FYB1O15117 783 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 VAC14Q08AM6 782 aa7.49□□□□□ -1.21
RFC1-201ENST00000349703 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
RFC1-201ENST00000349703 FAM177A1Q8N128 213 aaPredicted RBP7.49□□□□□ -1.21
RFC1-201ENST00000349703 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
RFC1-201ENST00000349703 KCNA1Q09470 495 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 C9orf131Q5VYM1 1079 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 CARD14Q9BXL6 1004 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.48□□□□□ -1.21
RFC1-201ENST00000349703 PPP2R5EQ16537 467 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 FAM200AQ8TCP9 573 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 GPCPD1Q9NPB8 672 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 INPP5FQ9Y2H2 1132 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 NDUFB5O43674 189 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
RFC1-201ENST00000349703 PDILTQ8N807 584 aa7.47□□□□□ -1.21
RFC1-201ENST00000349703 CALRP27797 417 aaKnown RBP7.47□□□□□ -1.21
RFC1-201ENST00000349703 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
RFC1-201ENST00000349703 EAPPQ56P03 285 aaPredicted RBP7.47□□□□□ -1.21
RFC1-201ENST00000349703 FAM9BQ8IZU0 186 aa7.47□□□□□ -1.21
RFC1-201ENST00000349703 C8orf34Q49A92 452 aa7.47□□□□□ -1.21
RFC1-201ENST00000349703 PLCD4Q9BRC7 762 aa7.47□□□□□ -1.21
RFC1-201ENST00000349703 G3BP2Q9UN86 482 aaKnown RBP7.46□□□□□ -1.21
RFC1-201ENST00000349703 MPHOSPH10O00566 681 aaKnown RBP7.46□□□□□ -1.21
RFC1-201ENST00000349703 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.21
RFC1-201ENST00000349703 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.21
RFC1-201ENST00000349703 S100BP04271 92 aaPredicted RBP7.46□□□□□ -1.22
RFC1-201ENST00000349703 NBPF7P0C2Y1 421 aaPredicted RBP7.46□□□□□ -1.22
RFC1-201ENST00000349703 MLLT3P42568 568 aaPredicted RBP7.46□□□□□ -1.22
RFC1-201ENST00000349703 GOLGA6L1Q8N7Z2 621 aa7.46□□□□□ -1.22
RFC1-201ENST00000349703 NLRP7Q8WX94 980 aa7.46□□□□□ -1.22
RFC1-201ENST00000349703 RAB3GAP2Q9H2M9 1393 aa7.46□□□□□ -1.22
RFC1-201ENST00000349703 H3BRB1 525 aa7.46□□□□□ -1.22
RFC1-201ENST00000349703 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
RFC1-201ENST00000349703 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
RFC1-201ENST00000349703 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.22
RFC1-201ENST00000349703 ARID4AP29374 1257 aaPredicted RBP7.45□□□□□ -1.22
RFC1-201ENST00000349703 TBC1D8BQ0IIM8 1120 aa7.45□□□□□ -1.22
RFC1-201ENST00000349703 DZIP3Q86Y13 1208 aaKnown RBP7.45□□□□□ -1.22
RFC1-201ENST00000349703 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
RFC1-201ENST00000349703 ZRSR2Q15696 482 aaKnown RBP7.45□□□□□ -1.22
RFC1-201ENST00000349703 HMGN5P82970 282 aaKnown RBP7.45□□□□□ -1.22
RFC1-201ENST00000349703 ACRBPQ8NEB7 543 aa7.45□□□□□ -1.22
RFC1-201ENST00000349703 LGR5O75473 907 aa7.45□□□□□ -1.22
RFC1-201ENST00000349703 CKAP2LQ8IYA6 745 aa7.45□□□□□ -1.22
RFC1-201ENST00000349703 NDUFB9Q9Y6M9 179 aa7.45□□□□□ -1.22
RFC1-201ENST00000349703 OATP04181 439 aa7.44□□□□□ -1.22
RFC1-201ENST00000349703 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
RFC1-201ENST00000349703 FGD1P98174 961 aa7.44□□□□□ -1.22
RFC1-201ENST00000349703 SART3Q15020 963 aaKnown RBP7.44□□□□□ -1.22
RFC1-201ENST00000349703 NKX1-1Q15270 411 aaPredicted RBP7.44□□□□□ -1.22
RFC1-201ENST00000349703 NLRP2Q9NX02 1062 aa7.44□□□□□ -1.22
RFC1-201ENST00000349703 ZNF232Q9UNY5 417 aa7.44□□□□□ -1.22
RFC1-201ENST00000349703 MATR3P43243 847 aaKnown RBP eCLIP7.44□□□□□ -1.22
RFC1-201ENST00000349703 DPF3Q92784 378 aa7.44□□□□□ -1.22
RFC1-201ENST00000349703 RNF135Q8IUD6 432 aa7.43□□□□□ -1.22
RFC1-201ENST00000349703 LRP2BPQ9P2M1 347 aa7.43□□□□□ -1.22
RFC1-201ENST00000349703 RRBP1Q9P2E9 1410 aaKnown RBP7.43□□□□□ -1.22
RFC1-201ENST00000349703 TESPA1A2RU30 521 aaPredicted RBP7.43□□□□□ -1.22
RFC1-201ENST00000349703 RASEFQ8IZ41 740 aa7.43□□□□□ -1.22
RFC1-201ENST00000349703 BMS1Q14692 1282 aaKnown RBP7.43□□□□□ -1.22
RFC1-201ENST00000349703 WDHD1O75717 1129 aaPredicted RBP7.42□□□□□ -1.22
RFC1-201ENST00000349703 FAM160A1Q05DH4 1040 aa7.42□□□□□ -1.22
RFC1-201ENST00000349703 SREK1Q8WXA9 508 aaKnown RBP7.42□□□□□ -1.22
RFC1-201ENST00000349703 MCM4P33991 863 aa7.42□□□□□ -1.22
RFC1-201ENST00000349703 ISY1Q9ULR0 285 aaKnown RBP7.42□□□□□ -1.22
RFC1-201ENST00000349703 BRD1O95696 1058 aa7.41□□□□□ -1.22
RFC1-201ENST00000349703 CLUL1Q15846 466 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms