RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 NPHP3Q7Z494 1330 aa27.97■■■□□ 2.07
KDM5C-201ENST00000349663 EP400Q96L91 3159 aa27.96■■■□□ 2.07
KDM5C-201ENST00000349663 SLC4A1APQ9BWU0 796 aaKnown RBP27.96■■■□□ 2.07
KDM5C-201ENST00000349663 ATRNO75882 1429 aa27.94■■■□□ 2.06
KDM5C-201ENST00000349663 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
KDM5C-201ENST00000349663 FOXD1Q16676 465 aa27.94■■■□□ 2.06
KDM5C-201ENST00000349663 FOXO3O43524 673 aa27.92■■■□□ 2.06
KDM5C-201ENST00000349663 COL22A1Q8NFW1 1626 aaPredicted RBP27.91■■■□□ 2.06
KDM5C-201ENST00000349663 MYOM2P54296 1465 aa27.9■■■□□ 2.06
KDM5C-201ENST00000349663 ZRANB1Q9UGI0 708 aa27.9■■■□□ 2.06
KDM5C-201ENST00000349663 XPCQ01831 940 aaPredicted RBP27.89■■■□□ 2.06
KDM5C-201ENST00000349663 CCDC125Q86Z20 511 aa27.88■■■□□ 2.05
KDM5C-201ENST00000349663 BCL9LQ86UU0 1499 aa27.88■■■□□ 2.05
KDM5C-201ENST00000349663 LRPPRCP42704 1394 aaKnown RBP27.87■■■□□ 2.05
KDM5C-201ENST00000349663 STK26Q9P289 416 aa27.87■■■□□ 2.05
KDM5C-201ENST00000349663 PXDNQ92626 1479 aa27.87■■■□□ 2.05
KDM5C-201ENST00000349663 GJD4Q96KN9 370 aaPredicted RBP27.86■■■□□ 2.05
KDM5C-201ENST00000349663 CDC42BPGQ6DT37 1551 aa27.86■■■□□ 2.05
KDM5C-201ENST00000349663 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
KDM5C-201ENST00000349663 PPLO60437 1756 aa27.85■■■□□ 2.05
KDM5C-201ENST00000349663 ADGRF5Q8IZF2 1346 aa27.85■■■□□ 2.05
KDM5C-201ENST00000349663 NUTM2FA1L443 756 aa27.84■■■□□ 2.05
KDM5C-201ENST00000349663 RGL3Q3MIN7 710 aa27.82■■■□□ 2.04
KDM5C-201ENST00000349663 TECPR2O15040 1411 aa27.78■■■□□ 2.04
KDM5C-201ENST00000349663 ABCC11Q96J66 1382 aa27.78■■■□□ 2.04
KDM5C-201ENST00000349663 TMEM132EQ6IEE7 984 aa27.78■■■□□ 2.04
KDM5C-201ENST00000349663 UNC5CLQ8IV45 518 aa27.78■■■□□ 2.04
KDM5C-201ENST00000349663 CCDC144AA2RUR9 1427 aa27.76■■■□□ 2.04
KDM5C-201ENST00000349663 ANKRD30BQ9BXX2 1392 aa27.76■■■□□ 2.03
KDM5C-201ENST00000349663 SPATA31A3Q5VYP0 1347 aa27.76■■■□□ 2.03
KDM5C-201ENST00000349663 PLEKHH1Q9ULM0 1364 aa27.74■■■□□ 2.03
KDM5C-201ENST00000349663 MARF1Q9Y4F3 1742 aaKnown RBP27.74■■■□□ 2.03
KDM5C-201ENST00000349663 KRT28Q7Z3Y7 464 aa27.73■■■□□ 2.03
KDM5C-201ENST00000349663 SPATA31E1Q6ZUB1 1445 aa27.72■■■□□ 2.03
KDM5C-201ENST00000349663 SLIT2O94813 1529 aa27.71■■■□□ 2.03
KDM5C-201ENST00000349663 RALGAPBQ86X10 1494 aa27.7■■■□□ 2.03
KDM5C-201ENST00000349663 SIRT1Q96EB6 747 aa27.69■■■□□ 2.02
KDM5C-201ENST00000349663 MPHOSPH9Q99550 1183 aa27.68■■■□□ 2.02
KDM5C-201ENST00000349663 YTHDC2Q9H6S0 1430 aaKnown RBP27.67■■■□□ 2.02
KDM5C-201ENST00000349663 HAP1P54257 671 aaPredicted RBP27.67■■■□□ 2.02
KDM5C-201ENST00000349663 PSME1Q06323 249 aa27.67■■■□□ 2.02
KDM5C-201ENST00000349663 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.67■■■□□ 2.02
KDM5C-201ENST00000349663 PIK3C2GO75747 1445 aa27.67■■■□□ 2.02
KDM5C-201ENST00000349663 BLMP54132 1417 aaPredicted RBP27.67■■■□□ 2.02
KDM5C-201ENST00000349663 PHF8Q9UPP1 1060 aa27.66■■■□□ 2.02
KDM5C-201ENST00000349663 GLI3P10071 1580 aa27.65■■■□□ 2.02
KDM5C-201ENST00000349663 SEPT12Q8IYM1 358 aa27.64■■■□□ 2.02
KDM5C-201ENST00000349663 FMN2Q9NZ56 1722 aa27.64■■■□□ 2.01
KDM5C-201ENST00000349663 KIF1AQ12756 1690 aa27.63■■■□□ 2.01
KDM5C-201ENST00000349663 VPS72Q15906 364 aa27.63■■■□□ 2.01
KDM5C-201ENST00000349663 CABLES1Q8TDN4 633 aa27.63■■■□□ 2.01
KDM5C-201ENST00000349663 KNDC1Q76NI1 1749 aa27.63■■■□□ 2.01
KDM5C-201ENST00000349663 SF3B2Q13435 895 aaKnown RBP27.62■■■□□ 2.01
KDM5C-201ENST00000349663 C14orf93Q9H972 538 aaKnown RBP27.62■■■□□ 2.01
KDM5C-201ENST00000349663 DEFB132Q7Z7B7 95 aa27.61■■■□□ 2.01
KDM5C-201ENST00000349663 USP32Q8NFA0 1604 aa27.6■■■□□ 2.01
KDM5C-201ENST00000349663 TNS3Q68CZ2 1445 aa27.6■■■□□ 2.01
KDM5C-201ENST00000349663 ONECUT3O60422 494 aaPredicted RBP27.6■■■□□ 2.01
KDM5C-201ENST00000349663 PLEKHG5O94827 1062 aa27.6■■■□□ 2.01
KDM5C-201ENST00000349663 CCDC9Q9Y3X0 531 aaKnown RBP27.6■■■□□ 2.01
KDM5C-201ENST00000349663 IFT172Q9UG01 1749 aa27.6■■■□□ 2.01
KDM5C-201ENST00000349663 LMOD2Q6P5Q4 547 aa27.59■■■□□ 2.01
KDM5C-201ENST00000349663 DHX57Q6P158 1386 aaKnown RBP27.58■■■□□ 2.01
KDM5C-201ENST00000349663 SBNO1A3KN83 1393 aa27.57■■■□□ 2
KDM5C-201ENST00000349663 CFAP70Q5T0N1 1121 aa27.56■■■□□ 2
KDM5C-201ENST00000349663 SAFB2Q14151 953 aaKnown RBP eCLIP27.55■■■□□ 2
KDM5C-201ENST00000349663 KRT27Q7Z3Y8 459 aa27.55■■■□□ 2
KDM5C-201ENST00000349663 PRAM1Q96QH2 718 aa27.55■■■□□ 2
KDM5C-201ENST00000349663 ARHGEF10O15013 1369 aa27.54■■■□□ 2
KDM5C-201ENST00000349663 NRXN1Q9ULB1 1477 aa27.53■■■□□ 2
KDM5C-201ENST00000349663 FAM83GA6ND36 823 aa27.53■■■□□ 2
KDM5C-201ENST00000349663 BRWD3Q6RI45 1802 aa27.53■■■□□ 2
KDM5C-201ENST00000349663 PMFBP1Q8TBY8 1022 aa27.51■■□□□ 1.99
KDM5C-201ENST00000349663 RGPD8O14715 1765 aaPredicted RBP27.5■■□□□ 1.99
KDM5C-201ENST00000349663 POGKQ9P215 609 aa27.5■■□□□ 1.99
KDM5C-201ENST00000349663 A0A0G2JS52 829 aa27.48■■□□□ 1.99
KDM5C-201ENST00000349663 MYT1Q01538 1121 aa27.48■■□□□ 1.99
KDM5C-201ENST00000349663 NWD2Q9ULI1 1742 aa27.47■■□□□ 1.99
KDM5C-201ENST00000349663 ACIN1Q9UKV3 1341 aaKnown RBP27.47■■□□□ 1.99
KDM5C-201ENST00000349663 PLCH1Q4KWH8 1693 aa27.46■■□□□ 1.99
KDM5C-201ENST00000349663 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
KDM5C-201ENST00000349663 BAG6P46379 1132 aa27.44■■□□□ 1.98
KDM5C-201ENST00000349663 FAM98CQ17RN3 349 aaKnown RBP27.44■■□□□ 1.98
KDM5C-201ENST00000349663 BTG4Q9NY30 223 aa27.44■■□□□ 1.98
KDM5C-201ENST00000349663 GPRASP1Q5JY77 1395 aa27.4■■□□□ 1.98
KDM5C-201ENST00000349663 HIRIP3Q9BW71 556 aaPredicted RBP27.4■■□□□ 1.98
KDM5C-201ENST00000349663 DLC1Q96QB1 1528 aa27.4■■□□□ 1.98
KDM5C-201ENST00000349663 ABCA3Q99758 1704 aa27.39■■□□□ 1.98
KDM5C-201ENST00000349663 TRAK1Q9UPV9 953 aa27.39■■□□□ 1.98
KDM5C-201ENST00000349663 PSDA5PKW4 1024 aaPredicted RBP27.38■■□□□ 1.97
KDM5C-201ENST00000349663 HRCP23327 699 aa27.35■■□□□ 1.97
KDM5C-201ENST00000349663 MINK1Q8N4C8 1332 aaPredicted RBP27.35■■□□□ 1.97
KDM5C-201ENST00000349663 EIF3AQ14152 1382 aaKnown RBP27.35■■□□□ 1.97
KDM5C-201ENST00000349663 SPATA31A5Q5VU36 1347 aa27.34■■□□□ 1.97
KDM5C-201ENST00000349663 SPATA31A7Q8IWB4 1347 aa27.34■■□□□ 1.97
KDM5C-201ENST00000349663 PRR36Q9H6K5 1346 aa27.34■■□□□ 1.97
KDM5C-201ENST00000349663 EN1Q05925 392 aaPredicted RBP27.33■■□□□ 1.97
KDM5C-201ENST00000349663 NGDNQ8NEJ9 315 aaKnown RBP27.33■■□□□ 1.97
KDM5C-201ENST00000349663 ADGRB2O60241 1585 aa27.33■■□□□ 1.97
KDM5C-201ENST00000349663 LRP5O75197 1615 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms