RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 DUOX2Q9NRD8 1548 aa16.97■□□□□ 0.31
CASC4-202ENST00000345795 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
CASC4-202ENST00000345795 PARD3Q8TEW0 1356 aa16.97■□□□□ 0.31
CASC4-202ENST00000345795 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
CASC4-202ENST00000345795 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
CASC4-202ENST00000345795 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
CASC4-202ENST00000345795 YEATS2Q9ULM3 1422 aa16.95■□□□□ 0.3
CASC4-202ENST00000345795 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
CASC4-202ENST00000345795 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
CASC4-202ENST00000345795 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
CASC4-202ENST00000345795 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
CASC4-202ENST00000345795 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
CASC4-202ENST00000345795 HDGFP51858 240 aaKnown RBP16.93■□□□□ 0.3
CASC4-202ENST00000345795 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
CASC4-202ENST00000345795 NLRP6P59044 892 aa16.93■□□□□ 0.3
CASC4-202ENST00000345795 GZF1Q9H116 711 aaPredicted RBP16.93■□□□□ 0.3
CASC4-202ENST00000345795 FYB1O15117 783 aa16.92■□□□□ 0.3
CASC4-202ENST00000345795 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
CASC4-202ENST00000345795 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
CASC4-202ENST00000345795 IGHDP01880 384 aa16.91■□□□□ 0.3
CASC4-202ENST00000345795 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
CASC4-202ENST00000345795 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
CASC4-202ENST00000345795 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
CASC4-202ENST00000345795 EIF2S2P20042 333 aaKnown RBP16.91■□□□□ 0.3
CASC4-202ENST00000345795 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
CASC4-202ENST00000345795 MCM10Q7L590 875 aa16.91■□□□□ 0.3
CASC4-202ENST00000345795 DZIP1LQ8IYY4 767 aaKnown RBP16.91■□□□□ 0.3
CASC4-202ENST00000345795 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
CASC4-202ENST00000345795 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
CASC4-202ENST00000345795 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
CASC4-202ENST00000345795 RLBP1P12271 317 aa16.9■□□□□ 0.3
CASC4-202ENST00000345795 KRT24Q2M2I5 525 aa16.89■□□□□ 0.3
CASC4-202ENST00000345795 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
CASC4-202ENST00000345795 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
CASC4-202ENST00000345795 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
CASC4-202ENST00000345795 ATP10AO60312 1499 aa16.88■□□□□ 0.29
CASC4-202ENST00000345795 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
CASC4-202ENST00000345795 NPATQ14207 1427 aa16.87■□□□□ 0.29
CASC4-202ENST00000345795 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
CASC4-202ENST00000345795 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
CASC4-202ENST00000345795 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
CASC4-202ENST00000345795 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
CASC4-202ENST00000345795 ATP7AQ04656 1500 aa16.86■□□□□ 0.29
CASC4-202ENST00000345795 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
CASC4-202ENST00000345795 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
CASC4-202ENST00000345795 COL17A1Q9UMD9 1497 aaPredicted RBP16.85■□□□□ 0.29
CASC4-202ENST00000345795 ZNF518AQ6AHZ1 1483 aa16.85■□□□□ 0.29
CASC4-202ENST00000345795 ABTB2Q8N961 1025 aa16.85■□□□□ 0.29
CASC4-202ENST00000345795 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
CASC4-202ENST00000345795 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
CASC4-202ENST00000345795 STAC3Q96MF2 364 aa16.84■□□□□ 0.29
CASC4-202ENST00000345795 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
CASC4-202ENST00000345795 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
CASC4-202ENST00000345795 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
CASC4-202ENST00000345795 CSB-PGBD3P0DP91 1061 aa16.84■□□□□ 0.29
CASC4-202ENST00000345795 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
CASC4-202ENST00000345795 KDM5CP41229 1560 aa16.83■□□□□ 0.29
CASC4-202ENST00000345795 ZCCHC11Q5TAX3 1644 aaKnown RBP16.83■□□□□ 0.29
CASC4-202ENST00000345795 DDRGK1Q96HY6 314 aa16.82■□□□□ 0.28
CASC4-202ENST00000345795 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
CASC4-202ENST00000345795 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
CASC4-202ENST00000345795 TMEM57Q8N5G2 664 aa16.82■□□□□ 0.28
CASC4-202ENST00000345795 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
CASC4-202ENST00000345795 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
CASC4-202ENST00000345795 IPO8O15397 1037 aaKnown RBP16.82■□□□□ 0.28
CASC4-202ENST00000345795 PCDHB15Q9Y5E8 787 aa16.81■□□□□ 0.28
CASC4-202ENST00000345795 PSME1Q06323 249 aa16.81■□□□□ 0.28
CASC4-202ENST00000345795 AMOTL2Q9Y2J4 779 aa16.81■□□□□ 0.28
CASC4-202ENST00000345795 LRPPRCP42704 1394 aaKnown RBP16.81■□□□□ 0.28
CASC4-202ENST00000345795 USP35Q9P2H5 1018 aa16.81■□□□□ 0.28
CASC4-202ENST00000345795 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
CASC4-202ENST00000345795 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
CASC4-202ENST00000345795 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
CASC4-202ENST00000345795 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
CASC4-202ENST00000345795 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
CASC4-202ENST00000345795 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
CASC4-202ENST00000345795 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
CASC4-202ENST00000345795 MAST1Q9Y2H9 1570 aa16.79■□□□□ 0.28
CASC4-202ENST00000345795 FOXO3O43524 673 aa16.79■□□□□ 0.28
CASC4-202ENST00000345795 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
CASC4-202ENST00000345795 MYO5CQ9NQX4 1742 aa16.78■□□□□ 0.28
CASC4-202ENST00000345795 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
CASC4-202ENST00000345795 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
CASC4-202ENST00000345795 OS9Q13438 667 aaPredicted RBP16.78■□□□□ 0.28
CASC4-202ENST00000345795 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
CASC4-202ENST00000345795 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
CASC4-202ENST00000345795 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
CASC4-202ENST00000345795 F6X3S4 739 aa16.77■□□□□ 0.28
CASC4-202ENST00000345795 TRIM27P14373 513 aa16.77■□□□□ 0.28
CASC4-202ENST00000345795 BECN1Q14457 450 aa16.77■□□□□ 0.28
CASC4-202ENST00000345795 POLKQ9UBT6 870 aa16.77■□□□□ 0.27
CASC4-202ENST00000345795 KDM5DQ9BY66 1539 aa16.76■□□□□ 0.27
CASC4-202ENST00000345795 ZC3H6P61129 1189 aaKnown RBP16.76■□□□□ 0.27
CASC4-202ENST00000345795 ABCC1P33527 1531 aa16.75■□□□□ 0.27
CASC4-202ENST00000345795 SEC24BO95487 1268 aa16.75■□□□□ 0.27
CASC4-202ENST00000345795 PRDM15P57071 1507 aaPredicted RBP16.75■□□□□ 0.27
CASC4-202ENST00000345795 FKBP5Q13451 457 aaPredicted RBP16.75■□□□□ 0.27
CASC4-202ENST00000345795 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
CASC4-202ENST00000345795 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
CASC4-202ENST00000345795 ACEP12821 1306 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms