RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 ESCO1Q5FWF5 840 aa29.92■■■□□ 2.38
KCNQ2-201ENST00000344425 NPHP3Q7Z494 1330 aa29.91■■■□□ 2.38
KCNQ2-201ENST00000344425 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
KCNQ2-201ENST00000344425 RGS12O14924 1447 aa29.9■■■□□ 2.38
KCNQ2-201ENST00000344425 MPHOSPH9Q99550 1183 aa29.89■■■□□ 2.38
KCNQ2-201ENST00000344425 STK26Q9P289 416 aa29.88■■■□□ 2.37
KCNQ2-201ENST00000344425 USP21Q9UK80 565 aa29.88■■■□□ 2.37
KCNQ2-201ENST00000344425 CDC42BPGQ6DT37 1551 aa29.88■■■□□ 2.37
KCNQ2-201ENST00000344425 SPATA31E1Q6ZUB1 1445 aa29.86■■■□□ 2.37
KCNQ2-201ENST00000344425 TRPC5Q9UL62 973 aaPredicted RBP29.86■■■□□ 2.37
KCNQ2-201ENST00000344425 LRPPRCP42704 1394 aaKnown RBP29.85■■■□□ 2.37
KCNQ2-201ENST00000344425 FNBP4Q8N3X1 1017 aaPredicted RBP29.85■■■□□ 2.37
KCNQ2-201ENST00000344425 TECPR2O15040 1411 aa29.84■■■□□ 2.37
KCNQ2-201ENST00000344425 WAPLQ7Z5K2 1190 aa29.84■■■□□ 2.37
KCNQ2-201ENST00000344425 ABCC11Q96J66 1382 aa29.83■■■□□ 2.37
KCNQ2-201ENST00000344425 FOXO3O43524 673 aa29.82■■■□□ 2.36
KCNQ2-201ENST00000344425 ACIN1Q9UKV3 1341 aaKnown RBP29.82■■■□□ 2.36
KCNQ2-201ENST00000344425 COL22A1Q8NFW1 1626 aaPredicted RBP29.81■■■□□ 2.36
KCNQ2-201ENST00000344425 TMEM132EQ6IEE7 984 aa29.8■■■□□ 2.36
KCNQ2-201ENST00000344425 NUTM2FA1L443 756 aa29.79■■■□□ 2.36
KCNQ2-201ENST00000344425 PXDNQ92626 1479 aa29.78■■■□□ 2.36
KCNQ2-201ENST00000344425 XPCQ01831 940 aaPredicted RBP29.78■■■□□ 2.36
KCNQ2-201ENST00000344425 MYOM2P54296 1465 aa29.78■■■□□ 2.36
KCNQ2-201ENST00000344425 PIK3C2GO75747 1445 aa29.76■■■□□ 2.36
KCNQ2-201ENST00000344425 ATAD2Q6PL18 1390 aa29.76■■■□□ 2.35
KCNQ2-201ENST00000344425 IFT172Q9UG01 1749 aa29.75■■■□□ 2.35
KCNQ2-201ENST00000344425 ATRNO75882 1429 aa29.75■■■□□ 2.35
KCNQ2-201ENST00000344425 PLEKHH1Q9ULM0 1364 aa29.74■■■□□ 2.35
KCNQ2-201ENST00000344425 YTHDC2Q9H6S0 1430 aaKnown RBP29.73■■■□□ 2.35
KCNQ2-201ENST00000344425 SIRT1Q96EB6 747 aa29.73■■■□□ 2.35
KCNQ2-201ENST00000344425 KNDC1Q76NI1 1749 aa29.72■■■□□ 2.35
KCNQ2-201ENST00000344425 C14orf93Q9H972 538 aaKnown RBP29.71■■■□□ 2.35
KCNQ2-201ENST00000344425 BCL9LQ86UU0 1499 aa29.68■■■□□ 2.34
KCNQ2-201ENST00000344425 SPATA31A3Q5VYP0 1347 aa29.67■■■□□ 2.34
KCNQ2-201ENST00000344425 DHX57Q6P158 1386 aaKnown RBP29.67■■■□□ 2.34
KCNQ2-201ENST00000344425 KRT28Q7Z3Y7 464 aa29.66■■■□□ 2.34
KCNQ2-201ENST00000344425 FMN2Q9NZ56 1722 aa29.65■■■□□ 2.34
KCNQ2-201ENST00000344425 GJD4Q96KN9 370 aaPredicted RBP29.65■■■□□ 2.34
KCNQ2-201ENST00000344425 KIF1AQ12756 1690 aa29.64■■■□□ 2.34
KCNQ2-201ENST00000344425 CFAP70Q5T0N1 1121 aa29.63■■■□□ 2.33
KCNQ2-201ENST00000344425 MARF1Q9Y4F3 1742 aaKnown RBP29.63■■■□□ 2.33
KCNQ2-201ENST00000344425 PSME1Q06323 249 aa29.62■■■□□ 2.33
KCNQ2-201ENST00000344425 PHF8Q9UPP1 1060 aa29.62■■■□□ 2.33
KCNQ2-201ENST00000344425 UNC5CLQ8IV45 518 aa29.61■■■□□ 2.33
KCNQ2-201ENST00000344425 NRXN1Q9ULB1 1477 aa29.61■■■□□ 2.33
KCNQ2-201ENST00000344425 CCDC125Q86Z20 511 aa29.6■■■□□ 2.33
KCNQ2-201ENST00000344425 HAP1P54257 671 aaPredicted RBP29.58■■■□□ 2.33
KCNQ2-201ENST00000344425 PRAM1Q96QH2 718 aa29.57■■■□□ 2.32
KCNQ2-201ENST00000344425 SLIT2O94813 1529 aa29.56■■■□□ 2.32
KCNQ2-201ENST00000344425 SAFB2Q14151 953 aaKnown RBP eCLIP29.55■■■□□ 2.32
KCNQ2-201ENST00000344425 POGKQ9P215 609 aa29.55■■■□□ 2.32
KCNQ2-201ENST00000344425 TNS3Q68CZ2 1445 aa29.55■■■□□ 2.32
KCNQ2-201ENST00000344425 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.53■■■□□ 2.32
KCNQ2-201ENST00000344425 SBNO1A3KN83 1393 aa29.52■■■□□ 2.32
KCNQ2-201ENST00000344425 ZRANB1Q9UGI0 708 aa29.52■■■□□ 2.32
KCNQ2-201ENST00000344425 RALGAPBQ86X10 1494 aa29.51■■■□□ 2.31
KCNQ2-201ENST00000344425 RAB3GAP2Q9H2M9 1393 aa29.5■■■□□ 2.31
KCNQ2-201ENST00000344425 LMOD2Q6P5Q4 547 aa29.5■■■□□ 2.31
KCNQ2-201ENST00000344425 USP32Q8NFA0 1604 aa29.5■■■□□ 2.31
KCNQ2-201ENST00000344425 ARHGEF10O15013 1369 aa29.49■■■□□ 2.31
KCNQ2-201ENST00000344425 CABLES1Q8TDN4 633 aa29.49■■■□□ 2.31
KCNQ2-201ENST00000344425 DLC1Q96QB1 1528 aa29.49■■■□□ 2.31
KCNQ2-201ENST00000344425 RGPD8O14715 1765 aaPredicted RBP29.48■■■□□ 2.31
KCNQ2-201ENST00000344425 EP400Q96L91 3159 aa29.48■■■□□ 2.31
KCNQ2-201ENST00000344425 ANKARQ7Z5J8 1434 aa29.48■■■□□ 2.31
KCNQ2-201ENST00000344425 PLEKHG5O94827 1062 aa29.45■■■□□ 2.31
KCNQ2-201ENST00000344425 VPS72Q15906 364 aa29.45■■■□□ 2.31
KCNQ2-201ENST00000344425 PMFBP1Q8TBY8 1022 aa29.45■■■□□ 2.31
KCNQ2-201ENST00000344425 GLI3P10071 1580 aa29.45■■■□□ 2.31
KCNQ2-201ENST00000344425 TRAK1Q9UPV9 953 aa29.45■■■□□ 2.3
KCNQ2-201ENST00000344425 STAC3Q96MF2 364 aa29.42■■■□□ 2.3
KCNQ2-201ENST00000344425 CCDC9Q9Y3X0 531 aaKnown RBP29.42■■■□□ 2.3
KCNQ2-201ENST00000344425 EIF3AQ14152 1382 aaKnown RBP29.41■■■□□ 2.3
KCNQ2-201ENST00000344425 SEPT12Q8IYM1 358 aa29.41■■■□□ 2.3
KCNQ2-201ENST00000344425 KDM2AQ9Y2K7 1162 aa29.41■■■□□ 2.3
KCNQ2-201ENST00000344425 BLMP54132 1417 aaPredicted RBP29.4■■■□□ 2.3
KCNQ2-201ENST00000344425 DCAF11Q8TEB1 546 aa29.4■■■□□ 2.3
KCNQ2-201ENST00000344425 HIRIP3Q9BW71 556 aaPredicted RBP29.4■■■□□ 2.3
KCNQ2-201ENST00000344425 ADGRB1O14514 1584 aa29.4■■■□□ 2.3
KCNQ2-201ENST00000344425 ADGRB2O60241 1585 aa29.39■■■□□ 2.3
KCNQ2-201ENST00000344425 GPRASP1Q5JY77 1395 aa29.39■■■□□ 2.29
KCNQ2-201ENST00000344425 SRCAPQ6ZRS2 3230 aa29.38■■■□□ 2.29
KCNQ2-201ENST00000344425 MINK1Q8N4C8 1332 aaPredicted RBP29.38■■■□□ 2.29
KCNQ2-201ENST00000344425 ONECUT3O60422 494 aaPredicted RBP29.37■■■□□ 2.29
KCNQ2-201ENST00000344425 FAM83GA6ND36 823 aa29.37■■■□□ 2.29
KCNQ2-201ENST00000344425 SF3B2Q13435 895 aaKnown RBP29.37■■■□□ 2.29
KCNQ2-201ENST00000344425 NWD2Q9ULI1 1742 aa29.36■■■□□ 2.29
KCNQ2-201ENST00000344425 PLCH1Q4KWH8 1693 aa29.34■■■□□ 2.29
KCNQ2-201ENST00000344425 WASLO00401 505 aaPredicted RBP29.34■■■□□ 2.29
KCNQ2-201ENST00000344425 ABCA3Q99758 1704 aa29.32■■■□□ 2.28
KCNQ2-201ENST00000344425 KRT27Q7Z3Y8 459 aa29.32■■■□□ 2.28
KCNQ2-201ENST00000344425 PRR36Q9H6K5 1346 aa29.32■■■□□ 2.28
KCNQ2-201ENST00000344425 TULP4Q9NRJ4 1543 aa29.31■■■□□ 2.28
KCNQ2-201ENST00000344425 BRWD3Q6RI45 1802 aa29.3■■■□□ 2.28
KCNQ2-201ENST00000344425 HRCP23327 699 aa29.3■■■□□ 2.28
KCNQ2-201ENST00000344425 NGDNQ8NEJ9 315 aaKnown RBP29.3■■■□□ 2.28
KCNQ2-201ENST00000344425 A0A0G2JS52 829 aa29.29■■■□□ 2.28
KCNQ2-201ENST00000344425 MYT1Q01538 1121 aa29.29■■■□□ 2.28
KCNQ2-201ENST00000344425 BTG4Q9NY30 223 aa29.29■■■□□ 2.28
KCNQ2-201ENST00000344425 TRPM3Q9HCF6 1732 aaPredicted RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms