RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ATAD2Q6PL18 1390 aa19.58■□□□□ 0.72
HERPUD1-202ENST00000344114 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.72
HERPUD1-202ENST00000344114 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
HERPUD1-202ENST00000344114 MARF1Q9Y4F3 1742 aaKnown RBP19.57■□□□□ 0.72
HERPUD1-202ENST00000344114 ORAI2Q96SN7 254 aa19.57■□□□□ 0.72
HERPUD1-202ENST00000344114 USP21Q9UK80 565 aa19.56■□□□□ 0.72
HERPUD1-202ENST00000344114 ATRNO75882 1429 aa19.56■□□□□ 0.72
HERPUD1-202ENST00000344114 PPLO60437 1756 aa19.55■□□□□ 0.72
HERPUD1-202ENST00000344114 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
HERPUD1-202ENST00000344114 TRPC5Q9UL62 973 aaPredicted RBP19.55■□□□□ 0.72
HERPUD1-202ENST00000344114 MYOM2P54296 1465 aa19.53■□□□□ 0.72
HERPUD1-202ENST00000344114 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
HERPUD1-202ENST00000344114 CDC42BPGQ6DT37 1551 aa19.52■□□□□ 0.72
HERPUD1-202ENST00000344114 PXDNQ92626 1479 aa19.5■□□□□ 0.71
HERPUD1-202ENST00000344114 RPGRIP1LQ68CZ1 1315 aa19.5■□□□□ 0.71
HERPUD1-202ENST00000344114 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.49■□□□□ 0.71
HERPUD1-202ENST00000344114 BCL9LQ86UU0 1499 aa19.49■□□□□ 0.71
HERPUD1-202ENST00000344114 NPHP3Q7Z494 1330 aa19.47■□□□□ 0.71
HERPUD1-202ENST00000344114 FOXD1Q16676 465 aa19.44■□□□□ 0.7
HERPUD1-202ENST00000344114 EP400Q96L91 3159 aa19.44■□□□□ 0.7
HERPUD1-202ENST00000344114 SRCAPQ6ZRS2 3230 aa19.43■□□□□ 0.7
HERPUD1-202ENST00000344114 ESCO1Q5FWF5 840 aa19.43■□□□□ 0.7
HERPUD1-202ENST00000344114 CCDC125Q86Z20 511 aa19.43■□□□□ 0.7
HERPUD1-202ENST00000344114 ZRANB1Q9UGI0 708 aa19.43■□□□□ 0.7
HERPUD1-202ENST00000344114 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
HERPUD1-202ENST00000344114 KNDC1Q76NI1 1749 aa19.42■□□□□ 0.7
HERPUD1-202ENST00000344114 TECPR2O15040 1411 aa19.41■□□□□ 0.7
HERPUD1-202ENST00000344114 IFT172Q9UG01 1749 aa19.41■□□□□ 0.7
HERPUD1-202ENST00000344114 GLI3P10071 1580 aa19.4■□□□□ 0.7
HERPUD1-202ENST00000344114 GJD4Q96KN9 370 aaPredicted RBP19.4■□□□□ 0.7
HERPUD1-202ENST00000344114 FMN2Q9NZ56 1722 aa19.4■□□□□ 0.7
HERPUD1-202ENST00000344114 FOXO3O43524 673 aa19.39■□□□□ 0.69
HERPUD1-202ENST00000344114 SLIT2O94813 1529 aa19.39■□□□□ 0.69
HERPUD1-202ENST00000344114 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
HERPUD1-202ENST00000344114 KIF1AQ12756 1690 aa19.39■□□□□ 0.69
HERPUD1-202ENST00000344114 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
HERPUD1-202ENST00000344114 USP32Q8NFA0 1604 aa19.37■□□□□ 0.69
HERPUD1-202ENST00000344114 XPCQ01831 940 aaPredicted RBP19.36■□□□□ 0.69
HERPUD1-202ENST00000344114 MPHOSPH9Q99550 1183 aa19.36■□□□□ 0.69
HERPUD1-202ENST00000344114 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
HERPUD1-202ENST00000344114 ADGRF5Q8IZF2 1346 aa19.35■□□□□ 0.69
HERPUD1-202ENST00000344114 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
HERPUD1-202ENST00000344114 UNC5CLQ8IV45 518 aa19.34■□□□□ 0.69
HERPUD1-202ENST00000344114 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
HERPUD1-202ENST00000344114 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
HERPUD1-202ENST00000344114 SPATA31A3Q5VYP0 1347 aa19.34■□□□□ 0.69
HERPUD1-202ENST00000344114 SIN3AQ96ST3 1273 aa19.33■□□□□ 0.69
HERPUD1-202ENST00000344114 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
HERPUD1-202ENST00000344114 CCDC144AA2RUR9 1427 aa19.32■□□□□ 0.68
HERPUD1-202ENST00000344114 SPATA31E1Q6ZUB1 1445 aa19.32■□□□□ 0.68
HERPUD1-202ENST00000344114 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
HERPUD1-202ENST00000344114 RGPD8O14715 1765 aaPredicted RBP19.32■□□□□ 0.68
HERPUD1-202ENST00000344114 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
HERPUD1-202ENST00000344114 TONSLQ96HA7 1378 aa19.31■□□□□ 0.68
HERPUD1-202ENST00000344114 PLCH1Q4KWH8 1693 aa19.31■□□□□ 0.68
HERPUD1-202ENST00000344114 ABCA3Q99758 1704 aa19.31■□□□□ 0.68
HERPUD1-202ENST00000344114 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
HERPUD1-202ENST00000344114 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
HERPUD1-202ENST00000344114 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
HERPUD1-202ENST00000344114 ZNF316A6NFI3 1004 aaPredicted RBP19.3■□□□□ 0.68
HERPUD1-202ENST00000344114 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
HERPUD1-202ENST00000344114 STK26Q9P289 416 aa19.3■□□□□ 0.68
HERPUD1-202ENST00000344114 TNS3Q68CZ2 1445 aa19.27■□□□□ 0.68
HERPUD1-202ENST00000344114 YTHDC2Q9H6S0 1430 aaKnown RBP19.27■□□□□ 0.68
HERPUD1-202ENST00000344114 LRP5O75197 1615 aa19.27■□□□□ 0.68
HERPUD1-202ENST00000344114 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
HERPUD1-202ENST00000344114 KRT28Q7Z3Y7 464 aa19.26■□□□□ 0.67
HERPUD1-202ENST00000344114 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
HERPUD1-202ENST00000344114 VPS72Q15906 364 aa19.24■□□□□ 0.67
HERPUD1-202ENST00000344114 RGL3Q3MIN7 710 aa19.24■□□□□ 0.67
HERPUD1-202ENST00000344114 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
HERPUD1-202ENST00000344114 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
HERPUD1-202ENST00000344114 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
HERPUD1-202ENST00000344114 NRXN1Q9ULB1 1477 aa19.23■□□□□ 0.67
HERPUD1-202ENST00000344114 SBNO1A3KN83 1393 aa19.23■□□□□ 0.67
HERPUD1-202ENST00000344114 NRAPQ86VF7 1730 aa19.22■□□□□ 0.67
HERPUD1-202ENST00000344114 PHF8Q9UPP1 1060 aa19.21■□□□□ 0.67
HERPUD1-202ENST00000344114 PSME1Q06323 249 aa19.2■□□□□ 0.66
HERPUD1-202ENST00000344114 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
HERPUD1-202ENST00000344114 CABLES1Q8TDN4 633 aa19.19■□□□□ 0.66
HERPUD1-202ENST00000344114 HAP1P54257 671 aaPredicted RBP19.19■□□□□ 0.66
HERPUD1-202ENST00000344114 TRPM3Q9HCF6 1732 aaPredicted RBP19.18■□□□□ 0.66
HERPUD1-202ENST00000344114 ARHGEF10O15013 1369 aa19.18■□□□□ 0.66
HERPUD1-202ENST00000344114 KRT27Q7Z3Y8 459 aa19.18■□□□□ 0.66
HERPUD1-202ENST00000344114 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
HERPUD1-202ENST00000344114 ADGRB2O60241 1585 aa19.17■□□□□ 0.66
HERPUD1-202ENST00000344114 ALS2Q96Q42 1657 aa19.16■□□□□ 0.66
HERPUD1-202ENST00000344114 ANKARQ7Z5J8 1434 aa19.16■□□□□ 0.66
HERPUD1-202ENST00000344114 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
HERPUD1-202ENST00000344114 RGPD1P0DJD0 1748 aa19.15■□□□□ 0.66
HERPUD1-202ENST00000344114 COL14A1Q05707 1796 aaKnown RBP19.14■□□□□ 0.66
HERPUD1-202ENST00000344114 CCDC9Q9Y3X0 531 aaKnown RBP19.14■□□□□ 0.65
HERPUD1-202ENST00000344114 CRYBG1Q9Y4K1 1723 aa19.14■□□□□ 0.65
HERPUD1-202ENST00000344114 FAM83GA6ND36 823 aa19.13■□□□□ 0.65
HERPUD1-202ENST00000344114 CFAP70Q5T0N1 1121 aa19.12■□□□□ 0.65
HERPUD1-202ENST00000344114 BAG6P46379 1132 aa19.11■□□□□ 0.65
HERPUD1-202ENST00000344114 LMOD2Q6P5Q4 547 aa19.11■□□□□ 0.65
HERPUD1-202ENST00000344114 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
HERPUD1-202ENST00000344114 TNS1Q9HBL0 1735 aaKnown RBP19.1■□□□□ 0.65
HERPUD1-202ENST00000344114 THSD7AQ9UPZ6 1657 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms