RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 LRRC59Q96AG4 307 aaKnown RBP24.79■■□□□ 1.56
CD55-202ENST00000343420 LRP6O75581 1613 aa24.79■■□□□ 1.56
CD55-202ENST00000343420 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
CD55-202ENST00000343420 DDX17Q92841 729 aaKnown RBP24.78■■□□□ 1.56
CD55-202ENST00000343420 SIRT1Q96EB6 747 aa24.78■■□□□ 1.56
CD55-202ENST00000343420 ORAI2Q96SN7 254 aa24.78■■□□□ 1.56
CD55-202ENST00000343420 PLEKHH1Q9ULM0 1364 aa24.77■■□□□ 1.56
CD55-202ENST00000343420 STAC3Q96MF2 364 aa24.75■■□□□ 1.55
CD55-202ENST00000343420 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
CD55-202ENST00000343420 POTEAQ6S8J7 498 aa24.74■■□□□ 1.55
CD55-202ENST00000343420 DCAF11Q8TEB1 546 aa24.74■■□□□ 1.55
CD55-202ENST00000343420 KDM2AQ9Y2K7 1162 aa24.73■■□□□ 1.55
CD55-202ENST00000343420 SOS2Q07890 1332 aaPredicted RBP24.71■■□□□ 1.55
CD55-202ENST00000343420 ESCO1Q5FWF5 840 aa24.71■■□□□ 1.55
CD55-202ENST00000343420 PNPLA6Q8IY17 1366 aa24.7■■□□□ 1.55
CD55-202ENST00000343420 FMN2Q9NZ56 1722 aa24.7■■□□□ 1.54
CD55-202ENST00000343420 NUTM2BA6NNL0 878 aaPredicted RBP24.7■■□□□ 1.54
CD55-202ENST00000343420 NUTM2EB1AL46 878 aaPredicted RBP24.7■■□□□ 1.54
CD55-202ENST00000343420 NUTM2AQ8IVF1 878 aaPredicted RBP24.7■■□□□ 1.54
CD55-202ENST00000343420 ADGRB1O14514 1584 aa24.69■■□□□ 1.54
CD55-202ENST00000343420 DLC1Q96QB1 1528 aa24.69■■□□□ 1.54
CD55-202ENST00000343420 NPHP3Q7Z494 1330 aa24.66■■□□□ 1.54
CD55-202ENST00000343420 NUTM2FA1L443 756 aa24.66■■□□□ 1.54
CD55-202ENST00000343420 PRAM1Q96QH2 718 aa24.66■■□□□ 1.54
CD55-202ENST00000343420 ZNF772Q68DY9 489 aaPredicted RBP24.65■■□□□ 1.54
CD55-202ENST00000343420 POGKQ9P215 609 aa24.64■■□□□ 1.54
CD55-202ENST00000343420 RGPD8O14715 1765 aaPredicted RBP24.62■■□□□ 1.53
CD55-202ENST00000343420 SAFB2Q14151 953 aaKnown RBP eCLIP24.62■■□□□ 1.53
CD55-202ENST00000343420 PXDNQ92626 1479 aa24.62■■□□□ 1.53
CD55-202ENST00000343420 KIF1AQ12756 1690 aa24.62■■□□□ 1.53
CD55-202ENST00000343420 FOXO3O43524 673 aa24.61■■□□□ 1.53
CD55-202ENST00000343420 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
CD55-202ENST00000343420 COL22A1Q8NFW1 1626 aaPredicted RBP24.59■■□□□ 1.53
CD55-202ENST00000343420 ADGRB2O60241 1585 aa24.59■■□□□ 1.53
CD55-202ENST00000343420 AFF2P51816 1311 aa24.57■■□□□ 1.52
CD55-202ENST00000343420 KIAA1210Q9ULL0 1709 aa24.56■■□□□ 1.52
CD55-202ENST00000343420 XPCQ01831 940 aaPredicted RBP24.56■■□□□ 1.52
CD55-202ENST00000343420 C8orf37Q96NL8 207 aa24.55■■□□□ 1.52
CD55-202ENST00000343420 PHF8Q9UPP1 1060 aa24.54■■□□□ 1.52
CD55-202ENST00000343420 ARHGEF28Q8N1W1 1705 aaKnown RBP24.54■■□□□ 1.52
CD55-202ENST00000343420 ADAMTS2O95450 1211 aa24.53■■□□□ 1.52
CD55-202ENST00000343420 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
CD55-202ENST00000343420 USP32Q8NFA0 1604 aa24.52■■□□□ 1.52
CD55-202ENST00000343420 HIRIP3Q9BW71 556 aaPredicted RBP24.51■■□□□ 1.51
CD55-202ENST00000343420 MINK1Q8N4C8 1332 aaPredicted RBP24.51■■□□□ 1.51
CD55-202ENST00000343420 RXRBP28702 533 aa24.5■■□□□ 1.51
CD55-202ENST00000343420 KRT28Q7Z3Y7 464 aa24.5■■□□□ 1.51
CD55-202ENST00000343420 NGLY1Q96IV0 654 aa24.5■■□□□ 1.51
CD55-202ENST00000343420 SPATA31A3Q5VYP0 1347 aa24.49■■□□□ 1.51
CD55-202ENST00000343420 EIF3AQ14152 1382 aaKnown RBP24.49■■□□□ 1.51
CD55-202ENST00000343420 PSME1Q06323 249 aa24.48■■□□□ 1.51
CD55-202ENST00000343420 MARF1Q9Y4F3 1742 aaKnown RBP24.47■■□□□ 1.51
CD55-202ENST00000343420 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
CD55-202ENST00000343420 TULP4Q9NRJ4 1543 aa24.46■■□□□ 1.51
CD55-202ENST00000343420 QTRT2Q9H974 415 aaKnown RBP24.45■■□□□ 1.5
CD55-202ENST00000343420 CDK12Q9NYV4 1490 aaPredicted RBP24.45■■□□□ 1.5
CD55-202ENST00000343420 PMFBP1Q8TBY8 1022 aa24.44■■□□□ 1.5
CD55-202ENST00000343420 SBNO1A3KN83 1393 aa24.43■■□□□ 1.5
CD55-202ENST00000343420 NBPF1Q3BBV0 1214 aa24.43■■□□□ 1.5
CD55-202ENST00000343420 FNBP4Q8N3X1 1017 aaPredicted RBP24.43■■□□□ 1.5
CD55-202ENST00000343420 L3MBTL2Q969R5 705 aa24.43■■□□□ 1.5
CD55-202ENST00000343420 SIN3AQ96ST3 1273 aa24.43■■□□□ 1.5
CD55-202ENST00000343420 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
CD55-202ENST00000343420 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
CD55-202ENST00000343420 RBM6P78332 1123 aaKnown RBP24.41■■□□□ 1.5
CD55-202ENST00000343420 USP21Q9UK80 565 aa24.41■■□□□ 1.5
CD55-202ENST00000343420 ITSN1Q15811 1721 aa24.39■■□□□ 1.5
CD55-202ENST00000343420 NEUROD1Q13562 356 aa24.38■■□□□ 1.49
CD55-202ENST00000343420 ARHGEF10O15013 1369 aa24.38■■□□□ 1.49
CD55-202ENST00000343420 TRPC5Q9UL62 973 aaPredicted RBP24.37■■□□□ 1.49
CD55-202ENST00000343420 TRPM3Q9HCF6 1732 aaPredicted RBP24.37■■□□□ 1.49
CD55-202ENST00000343420 GPRASP1Q5JY77 1395 aa24.36■■□□□ 1.49
CD55-202ENST00000343420 ATP7BP35670 1465 aa24.36■■□□□ 1.49
CD55-202ENST00000343420 LMOD2Q6P5Q4 547 aa24.35■■□□□ 1.49
CD55-202ENST00000343420 NUDT16Q96DE0 195 aaKnown RBP24.35■■□□□ 1.49
CD55-202ENST00000343420 CDK19Q9BWU1 502 aa24.35■■□□□ 1.49
CD55-202ENST00000343420 NGDNQ8NEJ9 315 aaKnown RBP24.34■■□□□ 1.49
CD55-202ENST00000343420 ATRNO75882 1429 aa24.34■■□□□ 1.49
CD55-202ENST00000343420 BCL9LQ86UU0 1499 aa24.33■■□□□ 1.49
CD55-202ENST00000343420 ABCA3Q99758 1704 aa24.33■■□□□ 1.49
CD55-202ENST00000343420 TRPM1Q7Z4N2 1603 aa24.33■■□□□ 1.49
CD55-202ENST00000343420 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
CD55-202ENST00000343420 RGS12O14924 1447 aa24.33■■□□□ 1.49
CD55-202ENST00000343420 ALS2Q96Q42 1657 aa24.33■■□□□ 1.49
CD55-202ENST00000343420 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
CD55-202ENST00000343420 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.32■■□□□ 1.48
CD55-202ENST00000343420 CENPJQ9HC77 1338 aaPredicted RBP24.32■■□□□ 1.48
CD55-202ENST00000343420 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
CD55-202ENST00000343420 TOPAZ1Q8N9V7 1692 aa24.3■■□□□ 1.48
CD55-202ENST00000343420 SLIT2O94813 1529 aa24.3■■□□□ 1.48
CD55-202ENST00000343420 QRICH2Q9H0J4 1663 aa24.29■■□□□ 1.48
CD55-202ENST00000343420 PLEKHG5O94827 1062 aa24.28■■□□□ 1.48
CD55-202ENST00000343420 UNC5CLQ8IV45 518 aa24.27■■□□□ 1.48
CD55-202ENST00000343420 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
CD55-202ENST00000343420 CCDC61Q9Y6R9 512 aa24.27■■□□□ 1.48
CD55-202ENST00000343420 NWD2Q9ULI1 1742 aa24.25■■□□□ 1.47
CD55-202ENST00000343420 PAK3O75914 559 aaPredicted RBP24.25■■□□□ 1.47
CD55-202ENST00000343420 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
CD55-202ENST00000343420 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
CD55-202ENST00000343420 PLEKHG3A1L390 1219 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms