RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 FAM43AQ8N2R8 423 aa10.25□□□□□ -0.77
PRDM2-203ENST00000343137 BECN2A8MW95 431 aa10.25□□□□□ -0.77
PRDM2-203ENST00000343137 LETM1O95202 739 aaPredicted RBP10.25□□□□□ -0.77
PRDM2-203ENST00000343137 GOLGA6L1Q8N7Z2 621 aa10.25□□□□□ -0.77
PRDM2-203ENST00000343137 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
PRDM2-203ENST00000343137 TPM3P06753 285 aa10.25□□□□□ -0.77
PRDM2-203ENST00000343137 CFAP70Q5T0N1 1121 aa10.25□□□□□ -0.77
PRDM2-203ENST00000343137 C9orf78Q9NZ63 289 aaPredicted RBP10.25□□□□□ -0.77
PRDM2-203ENST00000343137 RPRD2Q5VT52 1461 aaKnown RBP10.24□□□□□ -0.77
PRDM2-203ENST00000343137 ABCC5O15440 1437 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 ANO2Q9NQ90 1003 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 KIF14Q15058 1648 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 MBD3O95983 291 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
PRDM2-203ENST00000343137 CPLX2Q6PUV4 134 aaKnown RBP10.24□□□□□ -0.77
PRDM2-203ENST00000343137 CCDC39Q9UFE4 941 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 TSPYL4Q9UJ04 414 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 TRAK2O60296 914 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 SMC3Q9UQE7 1217 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 GGNBP2Q9H3C7 697 aa10.24□□□□□ -0.77
PRDM2-203ENST00000343137 GNAI3P08754 354 aa10.23□□□□□ -0.77
PRDM2-203ENST00000343137 CABP2Q9NPB3 220 aa10.23□□□□□ -0.77
PRDM2-203ENST00000343137 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
PRDM2-203ENST00000343137 MTERF4Q7Z6M4 381 aaKnown RBP10.23□□□□□ -0.77
PRDM2-203ENST00000343137 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 CIZ1Q9ULV3 898 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 EXOSC9Q06265 439 aaKnown RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
PRDM2-203ENST00000343137 MAP7D2Q96T17 732 aa10.22□□□□□ -0.77
PRDM2-203ENST00000343137 SLFN5Q08AF3 891 aa10.22□□□□□ -0.77
PRDM2-203ENST00000343137 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 MAGI1Q96QZ7 1491 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 NASPP49321 788 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 CCDC184Q52MB2 194 aa10.22□□□□□ -0.77
PRDM2-203ENST00000343137 ZNF330Q9Y3S2 320 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-203ENST00000343137 GAS2L2Q8NHY3 880 aa10.21□□□□□ -0.77
PRDM2-203ENST00000343137 ATAD2Q6PL18 1390 aa10.21□□□□□ -0.78
PRDM2-203ENST00000343137 CCDC173Q0VFZ6 552 aa10.21□□□□□ -0.78
PRDM2-203ENST00000343137 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.78
PRDM2-203ENST00000343137 TPM2P07951 284 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 TPM1P09493 284 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 SYNE3Q6ZMZ3 975 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 HOOK1Q9UJC3 728 aaKnown RBP10.2□□□□□ -0.78
PRDM2-203ENST00000343137 HMOX1P09601 288 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 PSMA5P28066 241 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 CCDC30Q5VVM6 783 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 BCAR3O75815 825 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 AFAP1Q8N556 730 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 HIP1O00291 1037 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 UBTFL1P0CB47 393 aaPredicted RBP10.2□□□□□ -0.78
PRDM2-203ENST00000343137 ATF7IPQ6VMQ6 1270 aa10.2□□□□□ -0.78
PRDM2-203ENST00000343137 EIF2S2P20042 333 aaKnown RBP10.19□□□□□ -0.78
PRDM2-203ENST00000343137 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 FRAT2O75474 233 aaPredicted RBP10.19□□□□□ -0.78
PRDM2-203ENST00000343137 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
PRDM2-203ENST00000343137 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
PRDM2-203ENST00000343137 MAPKBP1O60336 1514 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 GPS2Q13227 327 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 TRIM29Q14134 588 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 SASS6Q6UVJ0 657 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 AKAP17AQ02040 695 aaKnown RBP10.19□□□□□ -0.78
PRDM2-203ENST00000343137 RASSF8Q8NHQ8 419 aa10.19□□□□□ -0.78
PRDM2-203ENST00000343137 NKTRP30414 1462 aaKnown RBP10.19□□□□□ -0.78
PRDM2-203ENST00000343137 TSR1Q2NL82 804 aaKnown RBP10.18□□□□□ -0.78
PRDM2-203ENST00000343137 BICD2Q8TD16 824 aa10.18□□□□□ -0.78
PRDM2-203ENST00000343137 ARID3AQ99856 593 aa10.18□□□□□ -0.78
PRDM2-203ENST00000343137 ABCC11Q96J66 1382 aa10.18□□□□□ -0.78
PRDM2-203ENST00000343137 CCT4P50991 539 aaKnown RBP10.18□□□□□ -0.78
PRDM2-203ENST00000343137 ZNF692Q9BU19 519 aaPredicted RBP10.18□□□□□ -0.78
PRDM2-203ENST00000343137 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
PRDM2-203ENST00000343137 K7ELQ4 463 aaPredicted RBP10.17□□□□□ -0.78
PRDM2-203ENST00000343137 TPD52L1Q16890 204 aaPredicted RBP10.17□□□□□ -0.78
PRDM2-203ENST00000343137 ERC1Q8IUD2 1116 aa10.17□□□□□ -0.78
PRDM2-203ENST00000343137 TOMM22Q9NS69 142 aa10.17□□□□□ -0.78
PRDM2-203ENST00000343137 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
PRDM2-203ENST00000343137 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
PRDM2-203ENST00000343137 VPS37CA5D8V6 355 aaPredicted RBP10.16□□□□□ -0.78
PRDM2-203ENST00000343137 GNAI2P04899 355 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 CPLX1O14810 134 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 PDCP20941 246 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 FOXD4L6Q3SYB3 417 aaPredicted RBP10.16□□□□□ -0.78
PRDM2-203ENST00000343137 FOXD4L3Q6VB84 417 aaPredicted RBP10.16□□□□□ -0.78
PRDM2-203ENST00000343137 FCHSD2O94868 740 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 WWC1Q8IX03 1113 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
PRDM2-203ENST00000343137 UGGT2Q9NYU1 1516 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 TRDNQ13061 729 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 CHD1LQ86WJ1 897 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 SRCIN1Q9C0H9 1055 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
PRDM2-203ENST00000343137 SLC12A5Q9H2X9 1139 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 TSPY26PQ9H489 355 aa10.16□□□□□ -0.78
PRDM2-203ENST00000343137 ARHGEF11O15085 1522 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms