RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FOXD4L6Q3SYB3 417 aaPredicted RBP8.85□□□□□ -0.99
VCAN-202ENST00000342785 FOXD4L3Q6VB84 417 aaPredicted RBP8.85□□□□□ -0.99
VCAN-202ENST00000342785 RPGRIP1LQ68CZ1 1315 aa8.85□□□□□ -0.99
VCAN-202ENST00000342785 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
VCAN-202ENST00000342785 TWISTNBQ3B726 338 aaPredicted RBP8.85□□□□□ -0.99
VCAN-202ENST00000342785 ANO2Q9NQ90 1003 aa8.85□□□□□ -0.99
VCAN-202ENST00000342785 TSPYL4Q9UJ04 414 aa8.85□□□□□ -0.99
VCAN-202ENST00000342785 CHAF1AQ13111 956 aaPredicted RBP8.85□□□□□ -0.99
VCAN-202ENST00000342785 DRC7Q8IY82 874 aa8.85□□□□□ -0.99
VCAN-202ENST00000342785 CHMP3Q9Y3E7 222 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 CDC45O75419 566 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 CDK19Q9BWU1 502 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
VCAN-202ENST00000342785 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 INTS3Q68E01 1043 aaKnown RBP8.84□□□□□ -0.99
VCAN-202ENST00000342785 TXNDC2Q86VQ3 553 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 DISP3Q9P2K9 1392 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 UGGT2Q9NYU1 1516 aa8.84□□□□□ -0.99
VCAN-202ENST00000342785 GOLGA6L6A8MZA4 724 aa8.84□□□□□ -1
VCAN-202ENST00000342785 RARSP54136 660 aaKnown RBP8.84□□□□□ -1
VCAN-202ENST00000342785 BRPF3Q9ULD4 1205 aa8.84□□□□□ -1
VCAN-202ENST00000342785 NSD3Q9BZ95 1437 aa8.83□□□□□ -1
VCAN-202ENST00000342785 NINLQ9Y2I6 1382 aa8.83□□□□□ -1
VCAN-202ENST00000342785 TMPOP42166 694 aaKnown RBP8.83□□□□□ -1
VCAN-202ENST00000342785 NLRP6P59044 892 aa8.83□□□□□ -1
VCAN-202ENST00000342785 GORABQ5T7V8 394 aa8.83□□□□□ -1
VCAN-202ENST00000342785 DIAPH3Q9NSV4 1193 aa8.82□□□□□ -1
VCAN-202ENST00000342785 HTATSF1O43719 755 aaKnown RBP8.82□□□□□ -1
VCAN-202ENST00000342785 NUCB2P80303 420 aa8.82□□□□□ -1
VCAN-202ENST00000342785 C9orf78Q9NZ63 289 aaPredicted RBP8.82□□□□□ -1
VCAN-202ENST00000342785 NUP153P49790 1475 aaKnown RBP8.82□□□□□ -1
VCAN-202ENST00000342785 GCC1Q96CN9 775 aa8.82□□□□□ -1
VCAN-202ENST00000342785 TRAK2O60296 914 aa8.82□□□□□ -1
VCAN-202ENST00000342785 SULT6B1Q6IMI4 303 aa8.82□□□□□ -1
VCAN-202ENST00000342785 FCHSD2O94868 740 aa8.82□□□□□ -1
VCAN-202ENST00000342785 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
VCAN-202ENST00000342785 C1orf141Q5JVX7 400 aa8.81□□□□□ -1
VCAN-202ENST00000342785 TESK2Q96S53 571 aa8.81□□□□□ -1
VCAN-202ENST00000342785 IL27Q8NEV9 243 aa8.81□□□□□ -1
VCAN-202ENST00000342785 SSH1Q8WYL5 1049 aa8.81□□□□□ -1
VCAN-202ENST00000342785 RSPH6AQ9H0K4 717 aa8.81□□□□□ -1
VCAN-202ENST00000342785 NUTM2GQ5VZR2 741 aa8.81□□□□□ -1
VCAN-202ENST00000342785 ATAD2Q6PL18 1390 aa8.81□□□□□ -1
VCAN-202ENST00000342785 ATP6V1DQ9Y5K8 247 aa8.81□□□□□ -1
VCAN-202ENST00000342785 CSPP1Q1MSJ5 1256 aa8.8□□□□□ -1
VCAN-202ENST00000342785 THUMPD2Q9BTF0 503 aaKnown RBP8.8□□□□□ -1
VCAN-202ENST00000342785 PHF14O94880 888 aa8.8□□□□□ -1
VCAN-202ENST00000342785 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
VCAN-202ENST00000342785 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
VCAN-202ENST00000342785 ZNF428Q96B54 188 aa8.8□□□□□ -1
VCAN-202ENST00000342785 ZKSCAN1P17029 563 aaPredicted RBP8.8□□□□□ -1
VCAN-202ENST00000342785 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
VCAN-202ENST00000342785 GNAI3P08754 354 aa8.79□□□□□ -1
VCAN-202ENST00000342785 MRE11P49959 708 aa8.79□□□□□ -1
VCAN-202ENST00000342785 GNL2Q13823 731 aaKnown RBP8.79□□□□□ -1
VCAN-202ENST00000342785 RUFY2Q8WXA3 655 aa8.79□□□□□ -1
VCAN-202ENST00000342785 NEXNQ0ZGT2 675 aa8.79□□□□□ -1
VCAN-202ENST00000342785 LRPPRCP42704 1394 aaKnown RBP8.79□□□□□ -1
VCAN-202ENST00000342785 TCOF1Q13428 1488 aaKnown RBP8.79□□□□□ -1
VCAN-202ENST00000342785 SLC4A2P04920 1241 aa8.79□□□□□ -1
VCAN-202ENST00000342785 ATP10BO94823 1461 aa8.79□□□□□ -1
VCAN-202ENST00000342785 IDI1Q13907 227 aa8.79□□□□□ -1
VCAN-202ENST00000342785 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
VCAN-202ENST00000342785 ZNF692Q9BU19 519 aaPredicted RBP8.79□□□□□ -1
VCAN-202ENST00000342785 NPHP1O15259 732 aa8.79□□□□□ -1
VCAN-202ENST00000342785 IFIT2P09913 472 aaKnown RBP8.79□□□□□ -1
VCAN-202ENST00000342785 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
VCAN-202ENST00000342785 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
VCAN-202ENST00000342785 CHD1LQ86WJ1 897 aa8.79□□□□□ -1
VCAN-202ENST00000342785 UNC13AQ9UPW8 1703 aa8.78□□□□□ -1
VCAN-202ENST00000342785 DHX29Q7Z478 1369 aaKnown RBP8.78□□□□□ -1
VCAN-202ENST00000342785 PSME1Q06323 249 aa8.78□□□□□ -1
VCAN-202ENST00000342785 ARID3AQ99856 593 aa8.78□□□□□ -1
VCAN-202ENST00000342785 MCTP1Q6DN14 999 aa8.78□□□□□ -1
VCAN-202ENST00000342785 CCDC9Q9Y3X0 531 aaKnown RBP8.78□□□□□ -1
VCAN-202ENST00000342785 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
VCAN-202ENST00000342785 RALGAPBQ86X10 1494 aa8.78□□□□□ -1
VCAN-202ENST00000342785 SCAF11Q99590 1463 aaKnown RBP8.78□□□□□ -1
VCAN-202ENST00000342785 NEK4P51957 841 aa8.78□□□□□ -1
VCAN-202ENST00000342785 RRS1Q15050 365 aaKnown RBP8.78□□□□□ -1
VCAN-202ENST00000342785 NFE2L2Q16236 605 aa8.78□□□□□ -1
VCAN-202ENST00000342785 RABEP1Q15276 862 aa8.78□□□□□ -1
VCAN-202ENST00000342785 GAS2L2Q8NHY3 880 aa8.78□□□□□ -1
VCAN-202ENST00000342785 NKTRP30414 1462 aaKnown RBP8.78□□□□□ -1
VCAN-202ENST00000342785 SURF6O75683 361 aaKnown RBP8.77□□□□□ -1
VCAN-202ENST00000342785 HSP90AB4PQ58FF6 505 aa8.77□□□□□ -1
VCAN-202ENST00000342785 C14orf93Q9H972 538 aaKnown RBP8.77□□□□□ -1.01
VCAN-202ENST00000342785 KIF3AQ9Y496 699 aa8.77□□□□□ -1.01
VCAN-202ENST00000342785 RTEL1-TNFRSF6BF6WH68 1400 aa8.77□□□□□ -1.01
VCAN-202ENST00000342785 MCM4P33991 863 aa8.77□□□□□ -1.01
VCAN-202ENST00000342785 G3BP1Q13283 466 aaKnown RBP eCLIP8.77□□□□□ -1.01
VCAN-202ENST00000342785 WAPLQ7Z5K2 1190 aa8.77□□□□□ -1.01
VCAN-202ENST00000342785 IGHDP01880 384 aa8.76□□□□□ -1.01
VCAN-202ENST00000342785 CCDC30Q5VVM6 783 aa8.76□□□□□ -1.01
VCAN-202ENST00000342785 SLC26A8Q96RN1 970 aa8.76□□□□□ -1.01
VCAN-202ENST00000342785 PRAG1Q86YV5 1406 aa8.76□□□□□ -1.01
VCAN-202ENST00000342785 DDX58O95786 925 aaKnown RBP8.76□□□□□ -1.01
VCAN-202ENST00000342785 CDK11BP21127 795 aaKnown RBP8.76□□□□□ -1.01
VCAN-202ENST00000342785 TRIM27P14373 513 aa8.75□□□□□ -1.01
VCAN-202ENST00000342785 TTC5Q8N0Z6 440 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms