RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 VGFO15240 615 aaPredicted RBP25.83■■□□□ 1.73
TRA2B-202ENST00000342294 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
TRA2B-202ENST00000342294 NPHP3Q7Z494 1330 aa25.79■■□□□ 1.72
TRA2B-202ENST00000342294 GJD4Q96KN9 370 aaPredicted RBP25.78■■□□□ 1.72
TRA2B-202ENST00000342294 PXDNQ92626 1479 aa25.78■■□□□ 1.72
TRA2B-202ENST00000342294 ESCO1Q5FWF5 840 aa25.76■■□□□ 1.71
TRA2B-202ENST00000342294 RPGRIP1LQ68CZ1 1315 aa25.76■■□□□ 1.71
TRA2B-202ENST00000342294 EP400Q96L91 3159 aa25.76■■□□□ 1.71
TRA2B-202ENST00000342294 KIF1BO60333 1816 aa25.75■■□□□ 1.71
TRA2B-202ENST00000342294 FOXO3O43524 673 aa25.73■■□□□ 1.71
TRA2B-202ENST00000342294 CDC42BPGQ6DT37 1551 aa25.73■■□□□ 1.71
TRA2B-202ENST00000342294 XPCQ01831 940 aaPredicted RBP25.71■■□□□ 1.71
TRA2B-202ENST00000342294 BLMP54132 1417 aaPredicted RBP25.69■■□□□ 1.7
TRA2B-202ENST00000342294 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
TRA2B-202ENST00000342294 UNC5CLQ8IV45 518 aa25.68■■□□□ 1.7
TRA2B-202ENST00000342294 SLIT2O94813 1529 aa25.68■■□□□ 1.7
TRA2B-202ENST00000342294 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
TRA2B-202ENST00000342294 NAIPQ13075 1403 aa25.67■■□□□ 1.7
TRA2B-202ENST00000342294 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
TRA2B-202ENST00000342294 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.66■■□□□ 1.7
TRA2B-202ENST00000342294 GLI3P10071 1580 aa25.65■■□□□ 1.7
TRA2B-202ENST00000342294 SPATA31A3Q5VYP0 1347 aa25.63■■□□□ 1.69
TRA2B-202ENST00000342294 TECPR2O15040 1411 aa25.63■■□□□ 1.69
TRA2B-202ENST00000342294 PPLO60437 1756 aa25.62■■□□□ 1.69
TRA2B-202ENST00000342294 WAPLQ7Z5K2 1190 aa25.62■■□□□ 1.69
TRA2B-202ENST00000342294 DEFB132Q7Z7B7 95 aa25.62■■□□□ 1.69
TRA2B-202ENST00000342294 NUTM2FA1L443 756 aa25.61■■□□□ 1.69
TRA2B-202ENST00000342294 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
TRA2B-202ENST00000342294 ADGRF5Q8IZF2 1346 aa25.59■■□□□ 1.69
TRA2B-202ENST00000342294 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
TRA2B-202ENST00000342294 ONECUT3O60422 494 aaPredicted RBP25.57■■□□□ 1.68
TRA2B-202ENST00000342294 SEPT12Q8IYM1 358 aa25.57■■□□□ 1.68
TRA2B-202ENST00000342294 STK26Q9P289 416 aa25.57■■□□□ 1.68
TRA2B-202ENST00000342294 SLC4A1APQ9BWU0 796 aaKnown RBP25.56■■□□□ 1.68
TRA2B-202ENST00000342294 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
TRA2B-202ENST00000342294 CCDC144AA2RUR9 1427 aa25.55■■□□□ 1.68
TRA2B-202ENST00000342294 VPS72Q15906 364 aa25.55■■□□□ 1.68
TRA2B-202ENST00000342294 KRT28Q7Z3Y7 464 aa25.55■■□□□ 1.68
TRA2B-202ENST00000342294 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
TRA2B-202ENST00000342294 USP32Q8NFA0 1604 aa25.54■■□□□ 1.68
TRA2B-202ENST00000342294 SF3B2Q13435 895 aaKnown RBP25.53■■□□□ 1.68
TRA2B-202ENST00000342294 BRWD3Q6RI45 1802 aa25.53■■□□□ 1.68
TRA2B-202ENST00000342294 LRP5O75197 1615 aa25.5■■□□□ 1.67
TRA2B-202ENST00000342294 TMEM132EQ6IEE7 984 aa25.5■■□□□ 1.67
TRA2B-202ENST00000342294 FMN2Q9NZ56 1722 aa25.5■■□□□ 1.67
TRA2B-202ENST00000342294 KIF1AQ12756 1690 aa25.49■■□□□ 1.67
TRA2B-202ENST00000342294 TNS3Q68CZ2 1445 aa25.48■■□□□ 1.67
TRA2B-202ENST00000342294 SPATA31E1Q6ZUB1 1445 aa25.48■■□□□ 1.67
TRA2B-202ENST00000342294 ANKRD30BQ9BXX2 1392 aa25.48■■□□□ 1.67
TRA2B-202ENST00000342294 KRT27Q7Z3Y8 459 aa25.48■■□□□ 1.67
TRA2B-202ENST00000342294 CABLES1Q8TDN4 633 aa25.48■■□□□ 1.67
TRA2B-202ENST00000342294 SIRT1Q96EB6 747 aa25.47■■□□□ 1.67
TRA2B-202ENST00000342294 KNDC1Q76NI1 1749 aa25.46■■□□□ 1.67
TRA2B-202ENST00000342294 RGL3Q3MIN7 710 aa25.46■■□□□ 1.67
TRA2B-202ENST00000342294 PHF8Q9UPP1 1060 aa25.46■■□□□ 1.67
TRA2B-202ENST00000342294 PSME1Q06323 249 aa25.45■■□□□ 1.66
TRA2B-202ENST00000342294 YTHDC2Q9H6S0 1430 aaKnown RBP25.45■■□□□ 1.66
TRA2B-202ENST00000342294 SBNO1A3KN83 1393 aa25.44■■□□□ 1.66
TRA2B-202ENST00000342294 HAP1P54257 671 aaPredicted RBP25.44■■□□□ 1.66
TRA2B-202ENST00000342294 PIK3C2GO75747 1445 aa25.44■■□□□ 1.66
TRA2B-202ENST00000342294 NWD2Q9ULI1 1742 aa25.43■■□□□ 1.66
TRA2B-202ENST00000342294 HRCP23327 699 aa25.42■■□□□ 1.66
TRA2B-202ENST00000342294 CCDC9Q9Y3X0 531 aaKnown RBP25.42■■□□□ 1.66
TRA2B-202ENST00000342294 FAM83GA6ND36 823 aa25.41■■□□□ 1.66
TRA2B-202ENST00000342294 PLCH1Q4KWH8 1693 aa25.41■■□□□ 1.66
TRA2B-202ENST00000342294 PSDA5PKW4 1024 aaPredicted RBP25.4■■□□□ 1.66
TRA2B-202ENST00000342294 BAG6P46379 1132 aa25.4■■□□□ 1.66
TRA2B-202ENST00000342294 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
TRA2B-202ENST00000342294 IFT172Q9UG01 1749 aa25.39■■□□□ 1.65
TRA2B-202ENST00000342294 ARHGEF10O15013 1369 aa25.39■■□□□ 1.65
TRA2B-202ENST00000342294 PLEKHG5O94827 1062 aa25.37■■□□□ 1.65
TRA2B-202ENST00000342294 C14orf93Q9H972 538 aaKnown RBP25.36■■□□□ 1.65
TRA2B-202ENST00000342294 ABCA3Q99758 1704 aa25.35■■□□□ 1.65
TRA2B-202ENST00000342294 LMOD2Q6P5Q4 547 aa25.35■■□□□ 1.65
TRA2B-202ENST00000342294 RGPD8O14715 1765 aaPredicted RBP25.34■■□□□ 1.65
TRA2B-202ENST00000342294 FAM98CQ17RN3 349 aaKnown RBP25.34■■□□□ 1.65
TRA2B-202ENST00000342294 A0A0G2JS52 829 aa25.31■■□□□ 1.64
TRA2B-202ENST00000342294 MYT1Q01538 1121 aa25.31■■□□□ 1.64
TRA2B-202ENST00000342294 EN1Q05925 392 aaPredicted RBP25.31■■□□□ 1.64
TRA2B-202ENST00000342294 BTG4Q9NY30 223 aa25.31■■□□□ 1.64
TRA2B-202ENST00000342294 NRAPQ86VF7 1730 aa25.3■■□□□ 1.64
TRA2B-202ENST00000342294 MPHOSPH9Q99550 1183 aa25.3■■□□□ 1.64
TRA2B-202ENST00000342294 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
TRA2B-202ENST00000342294 PMFBP1Q8TBY8 1022 aa25.29■■□□□ 1.64
TRA2B-202ENST00000342294 PRAM1Q96QH2 718 aa25.29■■□□□ 1.64
TRA2B-202ENST00000342294 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
TRA2B-202ENST00000342294 CFAP70Q5T0N1 1121 aa25.28■■□□□ 1.64
TRA2B-202ENST00000342294 DISP2A7MBM2 1401 aa25.28■■□□□ 1.64
TRA2B-202ENST00000342294 SAFB2Q14151 953 aaKnown RBP eCLIP25.26■■□□□ 1.63
TRA2B-202ENST00000342294 R3HDM1Q15032 1099 aaKnown RBP25.26■■□□□ 1.63
TRA2B-202ENST00000342294 FAM182BQ5T319 152 aa25.26■■□□□ 1.63
TRA2B-202ENST00000342294 SPATA31A5Q5VU36 1347 aa25.26■■□□□ 1.63
TRA2B-202ENST00000342294 SPATA31A7Q8IWB4 1347 aa25.26■■□□□ 1.63
TRA2B-202ENST00000342294 TRPM3Q9HCF6 1732 aaPredicted RBP25.23■■□□□ 1.63
TRA2B-202ENST00000342294 COL14A1Q05707 1796 aaKnown RBP25.23■■□□□ 1.63
TRA2B-202ENST00000342294 DLC1Q96QB1 1528 aa25.22■■□□□ 1.63
TRA2B-202ENST00000342294 RGPD1P0DJD0 1748 aa25.22■■□□□ 1.63
TRA2B-202ENST00000342294 ALS2Q96Q42 1657 aa25.2■■□□□ 1.63
TRA2B-202ENST00000342294 THSD7AQ9UPZ6 1657 aa25.2■■□□□ 1.63
TRA2B-202ENST00000342294 POGKQ9P215 609 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms