RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TSPYL4Q9UJ04 414 aa14.84□□□□□ -0.03
CDH5-201ENST00000341529 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.03
CDH5-201ENST00000341529 MSNP26038 577 aaKnown RBP14.83□□□□□ -0.04
CDH5-201ENST00000341529 NLRP6P59044 892 aa14.83□□□□□ -0.04
CDH5-201ENST00000341529 SULT6B1Q6IMI4 303 aa14.83□□□□□ -0.04
CDH5-201ENST00000341529 NSD3Q9BZ95 1437 aa14.83□□□□□ -0.04
CDH5-201ENST00000341529 CCDC141Q6ZP82 1450 aa14.83□□□□□ -0.04
CDH5-201ENST00000341529 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
CDH5-201ENST00000341529 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
CDH5-201ENST00000341529 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
CDH5-201ENST00000341529 CD109Q6YHK3 1445 aa14.82□□□□□ -0.04
CDH5-201ENST00000341529 TEFQ10587 303 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 GNAI1P63096 354 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 IDI1Q13907 227 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 ANO2Q9NQ90 1003 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 KIF16BQ96L93 1317 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 TNNQ9UQP3 1299 aa14.81□□□□□ -0.04
CDH5-201ENST00000341529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.8□□□□□ -0.04
CDH5-201ENST00000341529 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
CDH5-201ENST00000341529 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDH5-201ENST00000341529 API5Q9BZZ5 524 aaKnown RBP14.79□□□□□ -0.04
CDH5-201ENST00000341529 XPCQ01831 940 aaPredicted RBP14.79□□□□□ -0.04
CDH5-201ENST00000341529 ST18O60284 1047 aa14.78□□□□□ -0.04
CDH5-201ENST00000341529 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
CDH5-201ENST00000341529 TMPOP42166 694 aaKnown RBP14.78□□□□□ -0.04
CDH5-201ENST00000341529 TMEM57Q8N5G2 664 aa14.78□□□□□ -0.04
CDH5-201ENST00000341529 UGGT2Q9NYU1 1516 aa14.78□□□□□ -0.04
CDH5-201ENST00000341529 AIMP1Q12904 312 aaKnown RBP14.78□□□□□ -0.04
CDH5-201ENST00000341529 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
CDH5-201ENST00000341529 NPHP1O15259 732 aa14.77□□□□□ -0.04
CDH5-201ENST00000341529 IGHDP01880 384 aa14.77□□□□□ -0.04
CDH5-201ENST00000341529 TULP1O00294 542 aaPredicted RBP14.77□□□□□ -0.04
CDH5-201ENST00000341529 CHMP5Q9NZZ3 219 aa14.77□□□□□ -0.04
CDH5-201ENST00000341529 RARSP54136 660 aaKnown RBP14.77□□□□□ -0.05
CDH5-201ENST00000341529 TESK2Q96S53 571 aa14.77□□□□□ -0.05
CDH5-201ENST00000341529 EMILIN1Q9Y6C2 1016 aa14.77□□□□□ -0.05
CDH5-201ENST00000341529 DRC7Q8IY82 874 aa14.76□□□□□ -0.05
CDH5-201ENST00000341529 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
CDH5-201ENST00000341529 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
CDH5-201ENST00000341529 PSME1Q06323 249 aa14.75□□□□□ -0.05
CDH5-201ENST00000341529 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
CDH5-201ENST00000341529 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
CDH5-201ENST00000341529 SLC4A2P04920 1241 aa14.75□□□□□ -0.05
CDH5-201ENST00000341529 NME9Q86XW9 330 aa14.75□□□□□ -0.05
CDH5-201ENST00000341529 GORABQ5T7V8 394 aa14.74□□□□□ -0.05
CDH5-201ENST00000341529 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
CDH5-201ENST00000341529 MCM10Q7L590 875 aa14.73□□□□□ -0.05
CDH5-201ENST00000341529 MCTP1Q6DN14 999 aa14.73□□□□□ -0.05
CDH5-201ENST00000341529 ABTB2Q8N961 1025 aa14.73□□□□□ -0.05
CDH5-201ENST00000341529 HSP90B1P14625 803 aaKnown RBP14.72□□□□□ -0.05
CDH5-201ENST00000341529 C1orf141Q5JVX7 400 aa14.72□□□□□ -0.05
CDH5-201ENST00000341529 WDR63Q8IWG1 891 aa14.72□□□□□ -0.05
CDH5-201ENST00000341529 DISP1Q96F81 1524 aa14.71□□□□□ -0.05
CDH5-201ENST00000341529 DDX11L8A8MPP1 907 aa14.71□□□□□ -0.05
CDH5-201ENST00000341529 PER1O15534 1290 aaPredicted RBP14.71□□□□□ -0.05
CDH5-201ENST00000341529 FANCAO15360 1455 aa14.71□□□□□ -0.05
CDH5-201ENST00000341529 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
CDH5-201ENST00000341529 FAM83GA6ND36 823 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 MPNDQ8N594 471 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 SLC52A1Q9NWF4 448 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 DHX29Q7Z478 1369 aaKnown RBP14.7□□□□□ -0.06
CDH5-201ENST00000341529 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 KIF14Q15058 1648 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 NOS1P29475 1434 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 ADAMTS12P58397 1594 aa14.7□□□□□ -0.06
CDH5-201ENST00000341529 MAP4K4O95819 1239 aaPredicted RBP14.69□□□□□ -0.06
CDH5-201ENST00000341529 FOSBP53539 338 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 CARD14Q9BXL6 1004 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 TRAK2O60296 914 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
CDH5-201ENST00000341529 DIAPH3Q9NSV4 1193 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 PCDHB15Q9Y5E8 787 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 RAPGEF6Q8TEU7 1601 aa14.69□□□□□ -0.06
CDH5-201ENST00000341529 REC8O95072 547 aa14.68□□□□□ -0.06
CDH5-201ENST00000341529 TRIM27P14373 513 aa14.68□□□□□ -0.06
CDH5-201ENST00000341529 PLEKHH1Q9ULM0 1364 aa14.68□□□□□ -0.06
CDH5-201ENST00000341529 SMARCA5O60264 1052 aaPredicted RBP14.68□□□□□ -0.06
CDH5-201ENST00000341529 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
CDH5-201ENST00000341529 NEK4P51957 841 aa14.68□□□□□ -0.06
CDH5-201ENST00000341529 NUDT16Q96DE0 195 aaKnown RBP14.68□□□□□ -0.06
CDH5-201ENST00000341529 NLRP2Q9NX02 1062 aa14.68□□□□□ -0.06
CDH5-201ENST00000341529 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 F6X3S4 739 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 CDC45O75419 566 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 IL1RAPL2Q9NP60 686 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 SYCP2Q9BX26 1530 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 EXOC6BQ9Y2D4 811 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 ASXL2Q76L83 1435 aa14.67□□□□□ -0.06
CDH5-201ENST00000341529 RLBP1P12271 317 aa14.66□□□□□ -0.06
CDH5-201ENST00000341529 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
CDH5-201ENST00000341529 CHD1LQ86WJ1 897 aa14.66□□□□□ -0.06
CDH5-201ENST00000341529 GPATCH3Q96I76 525 aa14.66□□□□□ -0.06
CDH5-201ENST00000341529 ANO8Q9HCE9 1232 aaPredicted RBP14.66□□□□□ -0.06
CDH5-201ENST00000341529 INTS3Q68E01 1043 aaKnown RBP14.66□□□□□ -0.06
CDH5-201ENST00000341529 RTEL1-TNFRSF6BF6WH68 1400 aa14.65□□□□□ -0.06
CDH5-201ENST00000341529 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms