RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 MTHFSP49914 203 aa15.4■□□□□ 0.06
C2orf88-201ENST00000340623 GPRASP1Q5JY77 1395 aa15.39■□□□□ 0.05
C2orf88-201ENST00000340623 E9PCH4 1651 aa15.39■□□□□ 0.05
C2orf88-201ENST00000340623 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
C2orf88-201ENST00000340623 NSD3Q9BZ95 1437 aa15.39■□□□□ 0.05
C2orf88-201ENST00000340623 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
C2orf88-201ENST00000340623 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
C2orf88-201ENST00000340623 PNNQ9H307 717 aaKnown RBP15.38■□□□□ 0.05
C2orf88-201ENST00000340623 ZMYM4Q5VZL5 1548 aa15.38■□□□□ 0.05
C2orf88-201ENST00000340623 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
C2orf88-201ENST00000340623 FRMPD1Q5SYB0 1578 aa15.38■□□□□ 0.05
C2orf88-201ENST00000340623 FOXO3O43524 673 aa15.38■□□□□ 0.05
C2orf88-201ENST00000340623 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
C2orf88-201ENST00000340623 AGLP35573 1532 aa15.37■□□□□ 0.05
C2orf88-201ENST00000340623 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
C2orf88-201ENST00000340623 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
C2orf88-201ENST00000340623 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
C2orf88-201ENST00000340623 KIF1BO60333 1816 aa15.36■□□□□ 0.05
C2orf88-201ENST00000340623 RICTORQ6R327 1708 aa15.36■□□□□ 0.05
C2orf88-201ENST00000340623 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
C2orf88-201ENST00000340623 LMTK2Q8IWU2 1503 aa15.35■□□□□ 0.05
C2orf88-201ENST00000340623 SPHKAPQ2M3C7 1700 aa15.35■□□□□ 0.05
C2orf88-201ENST00000340623 DMRT2Q9Y5R5 561 aa15.35■□□□□ 0.05
C2orf88-201ENST00000340623 PHF8Q9UPP1 1060 aa15.35■□□□□ 0.05
C2orf88-201ENST00000340623 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
C2orf88-201ENST00000340623 NLRP1Q9C000 1473 aa15.34■□□□□ 0.05
C2orf88-201ENST00000340623 METP08581 1390 aa15.34■□□□□ 0.05
C2orf88-201ENST00000340623 NME9Q86XW9 330 aa15.34■□□□□ 0.05
C2orf88-201ENST00000340623 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
C2orf88-201ENST00000340623 A2ML1A8K2U0 1454 aa15.33■□□□□ 0.04
C2orf88-201ENST00000340623 PIP4K2BP78356 416 aa15.33■□□□□ 0.04
C2orf88-201ENST00000340623 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
C2orf88-201ENST00000340623 CCDC9Q9Y3X0 531 aaKnown RBP15.31■□□□□ 0.04
C2orf88-201ENST00000340623 ACEP12821 1306 aa15.31■□□□□ 0.04
C2orf88-201ENST00000340623 APAF1O14727 1248 aa15.31■□□□□ 0.04
C2orf88-201ENST00000340623 HMOX1P09601 288 aa15.31■□□□□ 0.04
C2orf88-201ENST00000340623 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
C2orf88-201ENST00000340623 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
C2orf88-201ENST00000340623 MYOM2P54296 1465 aa15.3■□□□□ 0.04
C2orf88-201ENST00000340623 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
C2orf88-201ENST00000340623 PIK3C2GO75747 1445 aa15.3■□□□□ 0.04
C2orf88-201ENST00000340623 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
C2orf88-201ENST00000340623 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
C2orf88-201ENST00000340623 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.29■□□□□ 0.04
C2orf88-201ENST00000340623 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
C2orf88-201ENST00000340623 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
C2orf88-201ENST00000340623 B4GALNT3Q6L9W6 998 aa15.28■□□□□ 0.04
C2orf88-201ENST00000340623 CADPS2Q86UW7 1296 aa15.28■□□□□ 0.04
C2orf88-201ENST00000340623 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
C2orf88-201ENST00000340623 PLEKHG1Q9ULL1 1385 aa15.28■□□□□ 0.04
C2orf88-201ENST00000340623 ABCC11Q96J66 1382 aa15.28■□□□□ 0.04
C2orf88-201ENST00000340623 FBLN1P23142 703 aa15.27■□□□□ 0.04
C2orf88-201ENST00000340623 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
C2orf88-201ENST00000340623 EVA1CP58658 441 aa15.26■□□□□ 0.03
C2orf88-201ENST00000340623 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
C2orf88-201ENST00000340623 MSH6P52701 1360 aa15.26■□□□□ 0.03
C2orf88-201ENST00000340623 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
C2orf88-201ENST00000340623 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
C2orf88-201ENST00000340623 FRAT1Q92837 279 aaPredicted RBP15.25■□□□□ 0.03
C2orf88-201ENST00000340623 ADGRB3O60242 1522 aa15.24■□□□□ 0.03
C2orf88-201ENST00000340623 NPHP4O75161 1426 aaPredicted RBP15.24■□□□□ 0.03
C2orf88-201ENST00000340623 AMER1Q5JTC6 1135 aaPredicted RBP15.24■□□□□ 0.03
C2orf88-201ENST00000340623 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
C2orf88-201ENST00000340623 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 KRT28Q7Z3Y7 464 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
C2orf88-201ENST00000340623 ANKRD36BQ8N2N9 1353 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 NLRP2Q9NX02 1062 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 VWDEQ8N2E2 1590 aa15.23■□□□□ 0.03
C2orf88-201ENST00000340623 FYB1O15117 783 aa15.22■□□□□ 0.03
C2orf88-201ENST00000340623 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
C2orf88-201ENST00000340623 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
C2orf88-201ENST00000340623 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
C2orf88-201ENST00000340623 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.03
C2orf88-201ENST00000340623 ORAI2Q96SN7 254 aa15.21■□□□□ 0.03
C2orf88-201ENST00000340623 A0A1W2PP64 1363 aa15.21■□□□□ 0.02
C2orf88-201ENST00000340623 ZC3H13Q5T200 1668 aaKnown RBP15.21■□□□□ 0.02
C2orf88-201ENST00000340623 USP35Q9P2H5 1018 aa15.21■□□□□ 0.02
C2orf88-201ENST00000340623 ZFYVE9O95405 1425 aa15.2■□□□□ 0.02
C2orf88-201ENST00000340623 NUTM2BA6NNL0 878 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 NUTM2EB1AL46 878 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 ARXQ96QS3 562 aa15.2■□□□□ 0.02
C2orf88-201ENST00000340623 TTC21BQ7Z4L5 1316 aa15.2■□□□□ 0.02
C2orf88-201ENST00000340623 RUNDC1Q96C34 613 aa15.2■□□□□ 0.02
C2orf88-201ENST00000340623 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 PTPRMP28827 1452 aa15.2■□□□□ 0.02
C2orf88-201ENST00000340623 RIMS1Q86UR5 1692 aaKnown RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 PUS7Q96PZ0 661 aaKnown RBP15.2■□□□□ 0.02
C2orf88-201ENST00000340623 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
C2orf88-201ENST00000340623 SYNMO15061 1565 aa15.19■□□□□ 0.02
C2orf88-201ENST00000340623 RIPK4P57078 832 aa15.19■□□□□ 0.02
C2orf88-201ENST00000340623 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
C2orf88-201ENST00000340623 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
C2orf88-201ENST00000340623 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
C2orf88-201ENST00000340623 STRN4Q9NRL3 753 aa15.18■□□□□ 0.02
C2orf88-201ENST00000340623 PIK3C2BO00750 1634 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms