RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ARHGEF28Q8N1W1 1705 aaKnown RBP20.27■□□□□ 0.84
BRAT1-201ENST00000340611 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.26■□□□□ 0.83
BRAT1-201ENST00000340611 POGKQ9P215 609 aa20.26■□□□□ 0.83
BRAT1-201ENST00000340611 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
BRAT1-201ENST00000340611 CC2D1BQ5T0F9 858 aaKnown RBP20.25■□□□□ 0.83
BRAT1-201ENST00000340611 CABP2Q9NPB3 220 aa20.25■□□□□ 0.83
BRAT1-201ENST00000340611 THEMISQ8N1K5 641 aaPredicted RBP20.24■□□□□ 0.83
BRAT1-201ENST00000340611 TMC1Q8TDI8 760 aa20.24■□□□□ 0.83
BRAT1-201ENST00000340611 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
BRAT1-201ENST00000340611 EID1Q9Y6B2 187 aa20.23■□□□□ 0.83
BRAT1-201ENST00000340611 SETD1AO15047 1707 aaKnown RBP20.23■□□□□ 0.83
BRAT1-201ENST00000340611 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
BRAT1-201ENST00000340611 SLC12A5Q9H2X9 1139 aa20.21■□□□□ 0.83
BRAT1-201ENST00000340611 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
BRAT1-201ENST00000340611 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
BRAT1-201ENST00000340611 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
BRAT1-201ENST00000340611 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
BRAT1-201ENST00000340611 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
BRAT1-201ENST00000340611 SRPK2P78362 688 aaKnown RBP20.18■□□□□ 0.82
BRAT1-201ENST00000340611 MYOM1P52179 1685 aa20.18■□□□□ 0.82
BRAT1-201ENST00000340611 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
BRAT1-201ENST00000340611 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
BRAT1-201ENST00000340611 SETD1BQ9UPS6 1966 aaKnown RBP20.16■□□□□ 0.82
BRAT1-201ENST00000340611 RBM33Q96EV2 1170 aaKnown RBP20.16■□□□□ 0.82
BRAT1-201ENST00000340611 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
BRAT1-201ENST00000340611 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
BRAT1-201ENST00000340611 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
BRAT1-201ENST00000340611 NUTM2FA1L443 756 aa20.15■□□□□ 0.82
BRAT1-201ENST00000340611 ARHGAP23Q9P227 1491 aa20.15■□□□□ 0.82
BRAT1-201ENST00000340611 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.82
BRAT1-201ENST00000340611 SLIT1O75093 1534 aa20.14■□□□□ 0.82
BRAT1-201ENST00000340611 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
BRAT1-201ENST00000340611 EVC2Q86UK5 1308 aa20.14■□□□□ 0.81
BRAT1-201ENST00000340611 SBNO2Q9Y2G9 1366 aa20.13■□□□□ 0.81
BRAT1-201ENST00000340611 KDM4FA0A1W2PPD8 638 aa20.13■□□□□ 0.81
BRAT1-201ENST00000340611 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
BRAT1-201ENST00000340611 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
BRAT1-201ENST00000340611 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
BRAT1-201ENST00000340611 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
BRAT1-201ENST00000340611 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
BRAT1-201ENST00000340611 HSPA2P54652 639 aa20.11■□□□□ 0.81
BRAT1-201ENST00000340611 PPP4R2Q9NY27 417 aa20.11■□□□□ 0.81
BRAT1-201ENST00000340611 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
BRAT1-201ENST00000340611 AMOTL2Q9Y2J4 779 aa20.11■□□□□ 0.81
BRAT1-201ENST00000340611 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
BRAT1-201ENST00000340611 ANKLE2Q86XL3 938 aa20.09■□□□□ 0.81
BRAT1-201ENST00000340611 KTN1Q86UP2 1357 aaKnown RBP20.07■□□□□ 0.8
BRAT1-201ENST00000340611 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
BRAT1-201ENST00000340611 MED14O60244 1454 aa20.06■□□□□ 0.8
BRAT1-201ENST00000340611 KCNA6P17658 529 aa20.06■□□□□ 0.8
BRAT1-201ENST00000340611 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
BRAT1-201ENST00000340611 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
BRAT1-201ENST00000340611 ZNF142P52746 1687 aaPredicted RBP20.04■□□□□ 0.8
BRAT1-201ENST00000340611 TBX22Q9Y458 520 aa20.04■□□□□ 0.8
BRAT1-201ENST00000340611 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
BRAT1-201ENST00000340611 NSD3Q9BZ95 1437 aa20.03■□□□□ 0.8
BRAT1-201ENST00000340611 BRPF3Q9ULD4 1205 aa20.02■□□□□ 0.8
BRAT1-201ENST00000340611 PARD3Q8TEW0 1356 aa20.02■□□□□ 0.79
BRAT1-201ENST00000340611 DLC1Q96QB1 1528 aa20.02■□□□□ 0.79
BRAT1-201ENST00000340611 WASLO00401 505 aaPredicted RBP20.01■□□□□ 0.79
BRAT1-201ENST00000340611 MYBBP1AQ9BQG0 1328 aaKnown RBP20■□□□□ 0.79
BRAT1-201ENST00000340611 SIPA1L2Q9P2F8 1722 aaPredicted RBP20■□□□□ 0.79
BRAT1-201ENST00000340611 RALBP1Q15311 655 aa20■□□□□ 0.79
BRAT1-201ENST00000340611 A0A1W2PP64 1363 aa19.99■□□□□ 0.79
BRAT1-201ENST00000340611 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
BRAT1-201ENST00000340611 CPS1P31327 1500 aa19.98■□□□□ 0.79
BRAT1-201ENST00000340611 TECPR2O15040 1411 aa19.98■□□□□ 0.79
BRAT1-201ENST00000340611 ZBTB47Q9UFB7 747 aaPredicted RBP19.98■□□□□ 0.79
BRAT1-201ENST00000340611 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
BRAT1-201ENST00000340611 PRR36Q9H6K5 1346 aa19.97■□□□□ 0.79
BRAT1-201ENST00000340611 NUDT16Q96DE0 195 aaKnown RBP19.96■□□□□ 0.79
BRAT1-201ENST00000340611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.96■□□□□ 0.79
BRAT1-201ENST00000340611 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
BRAT1-201ENST00000340611 LAS1LQ9Y4W2 734 aaKnown RBP19.95■□□□□ 0.78
BRAT1-201ENST00000340611 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
BRAT1-201ENST00000340611 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
BRAT1-201ENST00000340611 PPP2R1AP30153 589 aa19.94■□□□□ 0.78
BRAT1-201ENST00000340611 ATAD2Q6PL18 1390 aa19.93■□□□□ 0.78
BRAT1-201ENST00000340611 CD163L1Q9NR16 1453 aa19.93■□□□□ 0.78
BRAT1-201ENST00000340611 ANKRD36BQ8N2N9 1353 aa19.93■□□□□ 0.78
BRAT1-201ENST00000340611 NLRP13Q86W25 1043 aa19.93■□□□□ 0.78
BRAT1-201ENST00000340611 ANP32AP39687 249 aaKnown RBP19.92■□□□□ 0.78
BRAT1-201ENST00000340611 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
BRAT1-201ENST00000340611 FBLN1P23142 703 aa19.92■□□□□ 0.78
BRAT1-201ENST00000340611 PPIP5K1Q6PFW1 1433 aa19.91■□□□□ 0.78
BRAT1-201ENST00000340611 PMFBP1Q8TBY8 1022 aa19.91■□□□□ 0.78
BRAT1-201ENST00000340611 SIRT1Q96EB6 747 aa19.91■□□□□ 0.78
BRAT1-201ENST00000340611 ZBED9Q6R2W3 1325 aa19.9■□□□□ 0.78
BRAT1-201ENST00000340611 NEFMP07197 916 aa19.9■□□□□ 0.78
BRAT1-201ENST00000340611 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
BRAT1-201ENST00000340611 IPO9Q96P70 1041 aaKnown RBP19.89■□□□□ 0.78
BRAT1-201ENST00000340611 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.78
BRAT1-201ENST00000340611 PUS7Q96PZ0 661 aaKnown RBP19.89■□□□□ 0.77
BRAT1-201ENST00000340611 TERF2IPQ9NYB0 399 aa19.89■□□□□ 0.77
BRAT1-201ENST00000340611 XRN1Q8IZH2 1706 aaKnown RBP19.89■□□□□ 0.77
BRAT1-201ENST00000340611 DIP2AQ14689 1571 aa19.88■□□□□ 0.77
BRAT1-201ENST00000340611 RGPD8O14715 1765 aaPredicted RBP19.88■□□□□ 0.77
BRAT1-201ENST00000340611 VSIG10Q8N0Z9 540 aa19.88■□□□□ 0.77
BRAT1-201ENST00000340611 CHD2O14647 1828 aaKnown RBP19.88■□□□□ 0.77
BRAT1-201ENST00000340611 CGNL1Q0VF96 1302 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms