RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CDC42BPGQ6DT37 1551 aa19.47■□□□□ 0.71
SIRPB3P-201ENST00000340424 SIRT1Q96EB6 747 aa19.46■□□□□ 0.71
SIRPB3P-201ENST00000340424 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
SIRPB3P-201ENST00000340424 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
SIRPB3P-201ENST00000340424 NHSL1Q5SYE7 1610 aa19.44■□□□□ 0.7
SIRPB3P-201ENST00000340424 TMEM132EQ6IEE7 984 aa19.44■□□□□ 0.7
SIRPB3P-201ENST00000340424 STK26Q9P289 416 aa19.43■□□□□ 0.7
SIRPB3P-201ENST00000340424 CFAP70Q5T0N1 1121 aa19.42■□□□□ 0.7
SIRPB3P-201ENST00000340424 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
SIRPB3P-201ENST00000340424 SPATA31A6Q5VVP1 1343 aa19.42■□□□□ 0.7
SIRPB3P-201ENST00000340424 SHPRHQ149N8 1683 aa19.42■□□□□ 0.7
SIRPB3P-201ENST00000340424 ILDR2Q71H61 639 aa19.41■□□□□ 0.7
SIRPB3P-201ENST00000340424 DLC1Q96QB1 1528 aa19.41■□□□□ 0.7
SIRPB3P-201ENST00000340424 ADGRB1O14514 1584 aa19.39■□□□□ 0.69
SIRPB3P-201ENST00000340424 WAPLQ7Z5K2 1190 aa19.38■□□□□ 0.69
SIRPB3P-201ENST00000340424 LRRC59Q96AG4 307 aaKnown RBP19.37■□□□□ 0.69
SIRPB3P-201ENST00000340424 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
SIRPB3P-201ENST00000340424 PLEKHH1Q9ULM0 1364 aa19.36■□□□□ 0.69
SIRPB3P-201ENST00000340424 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
SIRPB3P-201ENST00000340424 SOCS7O14512 581 aa19.33■□□□□ 0.68
SIRPB3P-201ENST00000340424 KIAA1210Q9ULL0 1709 aa19.33■□□□□ 0.68
SIRPB3P-201ENST00000340424 PRAM1Q96QH2 718 aa19.32■□□□□ 0.68
SIRPB3P-201ENST00000340424 ORAI2Q96SN7 254 aa19.32■□□□□ 0.68
SIRPB3P-201ENST00000340424 ADGRB2O60241 1585 aa19.32■□□□□ 0.68
SIRPB3P-201ENST00000340424 SOS2Q07890 1332 aaPredicted RBP19.31■□□□□ 0.68
SIRPB3P-201ENST00000340424 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
SIRPB3P-201ENST00000340424 ESCO1Q5FWF5 840 aa19.31■□□□□ 0.68
SIRPB3P-201ENST00000340424 POGKQ9P215 609 aa19.31■□□□□ 0.68
SIRPB3P-201ENST00000340424 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
SIRPB3P-201ENST00000340424 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
SIRPB3P-201ENST00000340424 LRP6O75581 1613 aa19.29■□□□□ 0.68
SIRPB3P-201ENST00000340424 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
SIRPB3P-201ENST00000340424 EIF3AQ14152 1382 aaKnown RBP19.28■□□□□ 0.68
SIRPB3P-201ENST00000340424 PNPLA6Q8IY17 1366 aa19.28■□□□□ 0.68
SIRPB3P-201ENST00000340424 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
SIRPB3P-201ENST00000340424 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
SIRPB3P-201ENST00000340424 TRAK1Q9UPV9 953 aa19.27■□□□□ 0.68
SIRPB3P-201ENST00000340424 ANKARQ7Z5J8 1434 aa19.26■□□□□ 0.67
SIRPB3P-201ENST00000340424 PXDNQ92626 1479 aa19.25■□□□□ 0.67
SIRPB3P-201ENST00000340424 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
SIRPB3P-201ENST00000340424 SAFB2Q14151 953 aaKnown RBP eCLIP19.24■□□□□ 0.67
SIRPB3P-201ENST00000340424 COL22A1Q8NFW1 1626 aaPredicted RBP19.23■□□□□ 0.67
SIRPB3P-201ENST00000340424 ZNF772Q68DY9 489 aaPredicted RBP19.23■□□□□ 0.67
SIRPB3P-201ENST00000340424 NUTM2FA1L443 756 aa19.22■□□□□ 0.67
SIRPB3P-201ENST00000340424 FOXO3O43524 673 aa19.22■□□□□ 0.67
SIRPB3P-201ENST00000340424 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
SIRPB3P-201ENST00000340424 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
SIRPB3P-201ENST00000340424 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
SIRPB3P-201ENST00000340424 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
SIRPB3P-201ENST00000340424 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
SIRPB3P-201ENST00000340424 PHF8Q9UPP1 1060 aa19.2■□□□□ 0.66
SIRPB3P-201ENST00000340424 RGPD8O14715 1765 aaPredicted RBP19.19■□□□□ 0.66
SIRPB3P-201ENST00000340424 USP32Q8NFA0 1604 aa19.18■□□□□ 0.66
SIRPB3P-201ENST00000340424 WASLO00401 505 aaPredicted RBP19.18■□□□□ 0.66
SIRPB3P-201ENST00000340424 PSME1Q06323 249 aa19.18■□□□□ 0.66
SIRPB3P-201ENST00000340424 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
SIRPB3P-201ENST00000340424 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
SIRPB3P-201ENST00000340424 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
SIRPB3P-201ENST00000340424 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
SIRPB3P-201ENST00000340424 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
SIRPB3P-201ENST00000340424 NBPF1Q3BBV0 1214 aa19.15■□□□□ 0.66
SIRPB3P-201ENST00000340424 SPATA31A3Q5VYP0 1347 aa19.15■□□□□ 0.66
SIRPB3P-201ENST00000340424 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
SIRPB3P-201ENST00000340424 ITSN1Q15811 1721 aa19.14■□□□□ 0.66
SIRPB3P-201ENST00000340424 KRT28Q7Z3Y7 464 aa19.14■□□□□ 0.65
SIRPB3P-201ENST00000340424 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
SIRPB3P-201ENST00000340424 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
SIRPB3P-201ENST00000340424 AFF2P51816 1311 aa19.13■□□□□ 0.65
SIRPB3P-201ENST00000340424 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
SIRPB3P-201ENST00000340424 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
SIRPB3P-201ENST00000340424 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
SIRPB3P-201ENST00000340424 ATP7BP35670 1465 aa19.11■□□□□ 0.65
SIRPB3P-201ENST00000340424 CENPJQ9HC77 1338 aaPredicted RBP19.11■□□□□ 0.65
SIRPB3P-201ENST00000340424 GPRASP1Q5JY77 1395 aa19.1■□□□□ 0.65
SIRPB3P-201ENST00000340424 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
SIRPB3P-201ENST00000340424 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
SIRPB3P-201ENST00000340424 NGLY1Q96IV0 654 aa19.1■□□□□ 0.65
SIRPB3P-201ENST00000340424 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
SIRPB3P-201ENST00000340424 TONSLQ96HA7 1378 aa19.09■□□□□ 0.65
SIRPB3P-201ENST00000340424 MARF1Q9Y4F3 1742 aaKnown RBP19.09■□□□□ 0.65
SIRPB3P-201ENST00000340424 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
SIRPB3P-201ENST00000340424 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
SIRPB3P-201ENST00000340424 NUDT16Q96DE0 195 aaKnown RBP19.08■□□□□ 0.64
SIRPB3P-201ENST00000340424 CDK19Q9BWU1 502 aa19.08■□□□□ 0.64
SIRPB3P-201ENST00000340424 RXRBP28702 533 aa19.07■□□□□ 0.64
SIRPB3P-201ENST00000340424 FNBP4Q8N3X1 1017 aaPredicted RBP19.07■□□□□ 0.64
SIRPB3P-201ENST00000340424 QRICH2Q9H0J4 1663 aa19.07■□□□□ 0.64
SIRPB3P-201ENST00000340424 TRPM3Q9HCF6 1732 aaPredicted RBP19.06■□□□□ 0.64
SIRPB3P-201ENST00000340424 TOPAZ1Q8N9V7 1692 aa19.06■□□□□ 0.64
SIRPB3P-201ENST00000340424 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
SIRPB3P-201ENST00000340424 CCDC61Q9Y6R9 512 aa19.05■□□□□ 0.64
SIRPB3P-201ENST00000340424 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
SIRPB3P-201ENST00000340424 RBM6P78332 1123 aaKnown RBP19.03■□□□□ 0.64
SIRPB3P-201ENST00000340424 QTRT2Q9H974 415 aaKnown RBP19.03■□□□□ 0.64
SIRPB3P-201ENST00000340424 USP21Q9UK80 565 aa19.03■□□□□ 0.64
SIRPB3P-201ENST00000340424 ALS2Q96Q42 1657 aa19.03■□□□□ 0.64
SIRPB3P-201ENST00000340424 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
SIRPB3P-201ENST00000340424 PLEKHG3A1L390 1219 aa19.02■□□□□ 0.64
SIRPB3P-201ENST00000340424 TRPC5Q9UL62 973 aaPredicted RBP19.02■□□□□ 0.64
SIRPB3P-201ENST00000340424 RALGAPBQ86X10 1494 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms