RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 RPRD2Q5VT52 1461 aaKnown RBP8.95□□□□□ -0.98
ZNF28-201ENST00000339844 NLRP1Q9C000 1473 aa8.95□□□□□ -0.98
ZNF28-201ENST00000339844 GOLGA2Q08379 1002 aa8.93□□□□□ -0.98
ZNF28-201ENST00000339844 IDI1Q13907 227 aa8.93□□□□□ -0.98
ZNF28-201ENST00000339844 UGGT1Q9NYU2 1555 aa8.93□□□□□ -0.98
ZNF28-201ENST00000339844 STRCQ7RTU9 1775 aa8.92□□□□□ -0.98
ZNF28-201ENST00000339844 PIK3C2BO00750 1634 aa8.91□□□□□ -0.98
ZNF28-201ENST00000339844 PLA2R1Q13018 1463 aa8.91□□□□□ -0.98
ZNF28-201ENST00000339844 PTPRTO14522 1441 aa8.91□□□□□ -0.98
ZNF28-201ENST00000339844 NCKAP5LQ9HCH0 1330 aa8.91□□□□□ -0.98
ZNF28-201ENST00000339844 CCER2I3L3R5 266 aa8.91□□□□□ -0.98
ZNF28-201ENST00000339844 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
ZNF28-201ENST00000339844 THEMISQ8N1K5 641 aaPredicted RBP8.9□□□□□ -0.98
ZNF28-201ENST00000339844 MPHOSPH9Q99550 1183 aa8.9□□□□□ -0.98
ZNF28-201ENST00000339844 CABP2Q9NPB3 220 aa8.9□□□□□ -0.98
ZNF28-201ENST00000339844 SLC52A1Q9NWF4 448 aa8.9□□□□□ -0.98
ZNF28-201ENST00000339844 SUPT16HQ9Y5B9 1047 aaKnown RBP8.9□□□□□ -0.98
ZNF28-201ENST00000339844 UBR1Q8IWV7 1749 aa8.9□□□□□ -0.98
ZNF28-201ENST00000339844 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
ZNF28-201ENST00000339844 ADGRB3O60242 1522 aa8.89□□□□□ -0.99
ZNF28-201ENST00000339844 PPP1R15AO75807 674 aaPredicted RBP8.88□□□□□ -0.99
ZNF28-201ENST00000339844 LTKP29376 864 aa8.88□□□□□ -0.99
ZNF28-201ENST00000339844 VSIG10Q8N0Z9 540 aa8.88□□□□□ -0.99
ZNF28-201ENST00000339844 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
ZNF28-201ENST00000339844 ARHGAP23Q9P227 1491 aa8.88□□□□□ -0.99
ZNF28-201ENST00000339844 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
ZNF28-201ENST00000339844 TMEM2Q9UHN6 1383 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 NEURL4Q96JN8 1562 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 SLIT1O75093 1534 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 TRPM2O94759 1503 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 CLCN6P51797 869 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 ANKLE2Q86XL3 938 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 TMEM131LA2VDJ0 1609 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 CLTCL1P53675 1640 aa8.87□□□□□ -0.99
ZNF28-201ENST00000339844 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
ZNF28-201ENST00000339844 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
ZNF28-201ENST00000339844 MYO5BQ9ULV0 1848 aa8.85□□□□□ -0.99
ZNF28-201ENST00000339844 SCAF11Q99590 1463 aaKnown RBP8.85□□□□□ -0.99
ZNF28-201ENST00000339844 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
ZNF28-201ENST00000339844 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
ZNF28-201ENST00000339844 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
ZNF28-201ENST00000339844 ZFYVE9O95405 1425 aa8.85□□□□□ -0.99
ZNF28-201ENST00000339844 POLR1AO95602 1720 aaPredicted RBP8.85□□□□□ -0.99
ZNF28-201ENST00000339844 MED14O60244 1454 aa8.84□□□□□ -0.99
ZNF28-201ENST00000339844 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
ZNF28-201ENST00000339844 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
ZNF28-201ENST00000339844 RIMS2Q9UQ26 1411 aa8.84□□□□□ -0.99
ZNF28-201ENST00000339844 MKRN3Q13064 507 aaKnown RBP8.83□□□□□ -1
ZNF28-201ENST00000339844 ZNF335Q9H4Z2 1342 aaPredicted RBP8.82□□□□□ -1
ZNF28-201ENST00000339844 SOX12O15370 315 aa8.82□□□□□ -1
ZNF28-201ENST00000339844 NLRP6P59044 892 aa8.82□□□□□ -1
ZNF28-201ENST00000339844 EID1Q9Y6B2 187 aa8.82□□□□□ -1
ZNF28-201ENST00000339844 ANKRD30BQ9BXX2 1392 aa8.82□□□□□ -1
ZNF28-201ENST00000339844 IQGAP1P46940 1657 aa8.81□□□□□ -1
ZNF28-201ENST00000339844 CCDC144AA2RUR9 1427 aa8.81□□□□□ -1
ZNF28-201ENST00000339844 TIE1P35590 1138 aa8.81□□□□□ -1
ZNF28-201ENST00000339844 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
ZNF28-201ENST00000339844 ERICH6BQ5W0A0 696 aa8.81□□□□□ -1
ZNF28-201ENST00000339844 SPATA31E1Q6ZUB1 1445 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 LTBP4Q8N2S1 1624 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 ANP32CO43423 234 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 GALR2O43603 387 aaPredicted RBP8.8□□□□□ -1
ZNF28-201ENST00000339844 POTEIP0CG38 1075 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 TRPC6Q9Y210 931 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 KIF1BO60333 1816 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 NEXMIFQ5QGS0 1516 aa8.8□□□□□ -1
ZNF28-201ENST00000339844 PLEKHG1Q9ULL1 1385 aa8.79□□□□□ -1
ZNF28-201ENST00000339844 RGL3Q3MIN7 710 aa8.79□□□□□ -1
ZNF28-201ENST00000339844 SLC26A8Q96RN1 970 aa8.79□□□□□ -1
ZNF28-201ENST00000339844 DDX10Q13206 875 aaKnown RBP8.78□□□□□ -1
ZNF28-201ENST00000339844 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.78□□□□□ -1
ZNF28-201ENST00000339844 MFRPQ9BY79 579 aa8.78□□□□□ -1
ZNF28-201ENST00000339844 ADAMTS13Q76LX8 1427 aa8.78□□□□□ -1
ZNF28-201ENST00000339844 NEFLP07196 543 aa8.77□□□□□ -1.01
ZNF28-201ENST00000339844 HDGFP51858 240 aaKnown RBP8.77□□□□□ -1.01
ZNF28-201ENST00000339844 CERKQ8TCT0 537 aa8.77□□□□□ -1.01
ZNF28-201ENST00000339844 BCANQ96GW7 911 aa8.77□□□□□ -1.01
ZNF28-201ENST00000339844 DCBLD2Q96PD2 775 aa8.77□□□□□ -1.01
ZNF28-201ENST00000339844 SIN3AQ96ST3 1273 aa8.77□□□□□ -1.01
ZNF28-201ENST00000339844 PHF8Q9UPP1 1060 aa8.77□□□□□ -1.01
ZNF28-201ENST00000339844 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
ZNF28-201ENST00000339844 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
ZNF28-201ENST00000339844 RPGRIP1LQ68CZ1 1315 aa8.76□□□□□ -1.01
ZNF28-201ENST00000339844 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
ZNF28-201ENST00000339844 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
ZNF28-201ENST00000339844 PPLO60437 1756 aa8.75□□□□□ -1.01
ZNF28-201ENST00000339844 ADGRF5Q8IZF2 1346 aa8.75□□□□□ -1.01
ZNF28-201ENST00000339844 TONSLQ96HA7 1378 aa8.74□□□□□ -1.01
ZNF28-201ENST00000339844 SETBP1Q9Y6X0 1596 aa8.74□□□□□ -1.01
ZNF28-201ENST00000339844 TRIM35Q9UPQ4 493 aa8.74□□□□□ -1.01
ZNF28-201ENST00000339844 KDM2AQ9Y2K7 1162 aa8.74□□□□□ -1.01
ZNF28-201ENST00000339844 TBX22Q9Y458 520 aa8.74□□□□□ -1.01
ZNF28-201ENST00000339844 METP08581 1390 aa8.73□□□□□ -1.01
ZNF28-201ENST00000339844 PTPRUQ92729 1446 aa8.73□□□□□ -1.01
ZNF28-201ENST00000339844 KCNA6P17658 529 aa8.73□□□□□ -1.01
ZNF28-201ENST00000339844 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
ZNF28-201ENST00000339844 IFT172Q9UG01 1749 aa8.73□□□□□ -1.01
ZNF28-201ENST00000339844 CPS1P31327 1500 aa8.73□□□□□ -1.01
ZNF28-201ENST00000339844 LRRC7Q96NW7 1537 aa8.72□□□□□ -1.01
ZNF28-201ENST00000339844 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms