RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
PARVB-201ENST00000338758 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
PARVB-201ENST00000338758 NOL8Q76FK4 1167 aaKnown RBP17.63■□□□□ 0.41
PARVB-201ENST00000338758 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
PARVB-201ENST00000338758 RRS1Q15050 365 aaKnown RBP17.62■□□□□ 0.41
PARVB-201ENST00000338758 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
PARVB-201ENST00000338758 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
PARVB-201ENST00000338758 RBM33Q96EV2 1170 aaKnown RBP17.62■□□□□ 0.41
PARVB-201ENST00000338758 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
PARVB-201ENST00000338758 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
PARVB-201ENST00000338758 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
PARVB-201ENST00000338758 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
PARVB-201ENST00000338758 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
PARVB-201ENST00000338758 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
PARVB-201ENST00000338758 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
PARVB-201ENST00000338758 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
PARVB-201ENST00000338758 PNISRQ8TF01 805 aaKnown RBP17.59■□□□□ 0.41
PARVB-201ENST00000338758 NUP153P49790 1475 aaKnown RBP17.59■□□□□ 0.41
PARVB-201ENST00000338758 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
PARVB-201ENST00000338758 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.41
PARVB-201ENST00000338758 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.41
PARVB-201ENST00000338758 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.41
PARVB-201ENST00000338758 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
PARVB-201ENST00000338758 CCDC184Q52MB2 194 aa17.57■□□□□ 0.4
PARVB-201ENST00000338758 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
PARVB-201ENST00000338758 PLCH2O75038 1416 aa17.57■□□□□ 0.4
PARVB-201ENST00000338758 TSR2Q969E8 191 aaKnown RBP17.57■□□□□ 0.4
PARVB-201ENST00000338758 TSHZ2Q9NRE2 1034 aa17.57■□□□□ 0.4
PARVB-201ENST00000338758 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
PARVB-201ENST00000338758 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
PARVB-201ENST00000338758 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
PARVB-201ENST00000338758 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
PARVB-201ENST00000338758 G3BP1Q13283 466 aaKnown RBP eCLIP17.55■□□□□ 0.4
PARVB-201ENST00000338758 DDX54Q8TDD1 881 aaKnown RBP17.55■□□□□ 0.4
PARVB-201ENST00000338758 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
PARVB-201ENST00000338758 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
PARVB-201ENST00000338758 PDE4AP27815 886 aa17.54■□□□□ 0.4
PARVB-201ENST00000338758 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
PARVB-201ENST00000338758 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
PARVB-201ENST00000338758 NSD3Q9BZ95 1437 aa17.54■□□□□ 0.4
PARVB-201ENST00000338758 FOXO3O43524 673 aa17.54■□□□□ 0.4
PARVB-201ENST00000338758 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
PARVB-201ENST00000338758 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
PARVB-201ENST00000338758 GBP4Q96PP9 640 aa17.53■□□□□ 0.4
PARVB-201ENST00000338758 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
PARVB-201ENST00000338758 DIAPH3Q9NSV4 1193 aa17.53■□□□□ 0.4
PARVB-201ENST00000338758 RAPGEF6Q8TEU7 1601 aa17.53■□□□□ 0.4
PARVB-201ENST00000338758 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
PARVB-201ENST00000338758 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
PARVB-201ENST00000338758 NOS1P29475 1434 aa17.51■□□□□ 0.39
PARVB-201ENST00000338758 ST18O60284 1047 aa17.51■□□□□ 0.39
PARVB-201ENST00000338758 DNTTIP2Q5QJE6 756 aaKnown RBP17.51■□□□□ 0.39
PARVB-201ENST00000338758 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
PARVB-201ENST00000338758 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
PARVB-201ENST00000338758 NME9Q86XW9 330 aa17.49■□□□□ 0.39
PARVB-201ENST00000338758 IPO9Q96P70 1041 aaKnown RBP17.49■□□□□ 0.39
PARVB-201ENST00000338758 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
PARVB-201ENST00000338758 C14orf93Q9H972 538 aaKnown RBP17.49■□□□□ 0.39
PARVB-201ENST00000338758 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
PARVB-201ENST00000338758 KDM5BQ9UGL1 1544 aa17.48■□□□□ 0.39
PARVB-201ENST00000338758 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
PARVB-201ENST00000338758 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
PARVB-201ENST00000338758 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
PARVB-201ENST00000338758 ADAMTS12P58397 1594 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 RPRD2Q5VT52 1461 aaKnown RBP17.47■□□□□ 0.39
PARVB-201ENST00000338758 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 FCHSD2O94868 740 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 CABP4P57796 275 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
PARVB-201ENST00000338758 BCAR3O75815 825 aa17.46■□□□□ 0.39
PARVB-201ENST00000338758 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.39
PARVB-201ENST00000338758 NEUROD6Q96NK8 337 aa17.46■□□□□ 0.39
PARVB-201ENST00000338758 KCNH5Q8NCM2 988 aa17.46■□□□□ 0.39
PARVB-201ENST00000338758 RUFY2Q8WXA3 655 aa17.46■□□□□ 0.39
PARVB-201ENST00000338758 SPG7Q9UQ90 795 aa17.46■□□□□ 0.39
PARVB-201ENST00000338758 GNAI3P08754 354 aa17.45■□□□□ 0.38
PARVB-201ENST00000338758 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
PARVB-201ENST00000338758 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
PARVB-201ENST00000338758 REC8O95072 547 aa17.44■□□□□ 0.38
PARVB-201ENST00000338758 TNRQ92752 1358 aa17.44■□□□□ 0.38
PARVB-201ENST00000338758 A2MP01023 1474 aa17.44■□□□□ 0.38
PARVB-201ENST00000338758 FOXD4L5Q5VV16 416 aaPredicted RBP17.44■□□□□ 0.38
PARVB-201ENST00000338758 FOXD4L4Q8WXT5 416 aaPredicted RBP17.44■□□□□ 0.38
PARVB-201ENST00000338758 APPP05067 770 aa17.44■□□□□ 0.38
PARVB-201ENST00000338758 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
PARVB-201ENST00000338758 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
PARVB-201ENST00000338758 ANO2Q9NQ90 1003 aa17.43■□□□□ 0.38
PARVB-201ENST00000338758 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
PARVB-201ENST00000338758 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
PARVB-201ENST00000338758 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
PARVB-201ENST00000338758 NRDCO43847 1150 aa17.43■□□□□ 0.38
PARVB-201ENST00000338758 ZNF428Q96B54 188 aa17.43■□□□□ 0.38
PARVB-201ENST00000338758 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
PARVB-201ENST00000338758 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
PARVB-201ENST00000338758 GOLGA6L6A8MZA4 724 aa17.42■□□□□ 0.38
PARVB-201ENST00000338758 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
PARVB-201ENST00000338758 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms