RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 HSPA1LP34931 641 aa35.52■■■■□ 3.28
FAM78B-201ENST00000338353 DLC1Q96QB1 1528 aa35.52■■■■□ 3.28
FAM78B-201ENST00000338353 PRAM1Q96QH2 718 aa35.51■■■■□ 3.28
FAM78B-201ENST00000338353 SAFB2Q14151 953 aaKnown RBP eCLIP35.5■■■■□ 3.27
FAM78B-201ENST00000338353 POGKQ9P215 609 aa35.49■■■■□ 3.27
FAM78B-201ENST00000338353 MST1RQ04912 1400 aa35.48■■■■□ 3.27
FAM78B-201ENST00000338353 NBPF8Q3BBV2 869 aa35.45■■■■□ 3.27
FAM78B-201ENST00000338353 TRPM1Q7Z4N2 1603 aa35.45■■■■□ 3.27
FAM78B-201ENST00000338353 CDC42BPGQ6DT37 1551 aa35.43■■■■□ 3.26
FAM78B-201ENST00000338353 ARHGEF28Q8N1W1 1705 aaKnown RBP35.42■■■■□ 3.26
FAM78B-201ENST00000338353 ZEB1P37275 1124 aaPredicted RBP35.41■■■■□ 3.26
FAM78B-201ENST00000338353 BRINP3Q76B58 766 aa35.38■■■■□ 3.25
FAM78B-201ENST00000338353 C1orf167Q5SNV9 1468 aa35.38■■■■□ 3.25
FAM78B-201ENST00000338353 ROCK2O75116 1388 aaKnown RBP35.37■■■■□ 3.25
FAM78B-201ENST00000338353 NUTM2FA1L443 756 aa35.34■■■■□ 3.25
FAM78B-201ENST00000338353 MINK1Q8N4C8 1332 aaPredicted RBP35.34■■■■□ 3.25
FAM78B-201ENST00000338353 HIRIP3Q9BW71 556 aaPredicted RBP35.34■■■■□ 3.25
FAM78B-201ENST00000338353 PHLPP1O60346 1717 aa35.31■■■■□ 3.24
FAM78B-201ENST00000338353 FMN2Q9NZ56 1722 aa35.31■■■■□ 3.24
FAM78B-201ENST00000338353 ORAI2Q96SN7 254 aa35.3■■■■□ 3.24
FAM78B-201ENST00000338353 ADGRB2O60241 1585 aa35.28■■■■□ 3.24
FAM78B-201ENST00000338353 RALGAPBQ86X10 1494 aa35.25■■■■□ 3.23
FAM78B-201ENST00000338353 AHDC1Q5TGY3 1603 aaPredicted RBP35.25■■■■□ 3.23
FAM78B-201ENST00000338353 ESCO1Q5FWF5 840 aa35.25■■■■□ 3.23
FAM78B-201ENST00000338353 TIMELESSQ9UNS1 1208 aa35.24■■■■□ 3.23
FAM78B-201ENST00000338353 GPRASP1Q5JY77 1395 aa35.24■■■■□ 3.23
FAM78B-201ENST00000338353 DDX17Q92841 729 aaKnown RBP35.23■■■■□ 3.23
FAM78B-201ENST00000338353 CENPJQ9HC77 1338 aaPredicted RBP35.23■■■■□ 3.23
FAM78B-201ENST00000338353 CARD11Q9BXL7 1154 aa35.21■■■■□ 3.23
FAM78B-201ENST00000338353 RGPD8O14715 1765 aaPredicted RBP35.21■■■■□ 3.23
FAM78B-201ENST00000338353 COL16A1Q07092 1604 aaPredicted RBP35.21■■■■□ 3.23
FAM78B-201ENST00000338353 NHSL1Q5SYE7 1610 aa35.21■■■■□ 3.23
FAM78B-201ENST00000338353 WASLO00401 505 aaPredicted RBP35.2■■■■□ 3.23
FAM78B-201ENST00000338353 QRICH2Q9H0J4 1663 aa35.17■■■■□ 3.22
FAM78B-201ENST00000338353 EIF3AQ14152 1382 aaKnown RBP35.15■■■■□ 3.22
FAM78B-201ENST00000338353 USP32Q8NFA0 1604 aa35.14■■■■□ 3.22
FAM78B-201ENST00000338353 ANKARQ7Z5J8 1434 aa35.13■■■■□ 3.21
FAM78B-201ENST00000338353 TULP4Q9NRJ4 1543 aa35.12■■■■□ 3.21
FAM78B-201ENST00000338353 FOXO3O43524 673 aa35.11■■■■□ 3.21
FAM78B-201ENST00000338353 CDK19Q9BWU1 502 aa35.11■■■■□ 3.21
FAM78B-201ENST00000338353 PRR36Q9H6K5 1346 aa35.1■■■■□ 3.21
FAM78B-201ENST00000338353 PHF8Q9UPP1 1060 aa35.09■■■■□ 3.21
FAM78B-201ENST00000338353 KIF1AQ12756 1690 aa35.09■■■■□ 3.21
FAM78B-201ENST00000338353 JCADQ9P266 1359 aa35.09■■■■□ 3.21
FAM78B-201ENST00000338353 NPHP3Q7Z494 1330 aa35.08■■■■□ 3.21
FAM78B-201ENST00000338353 SOS2Q07890 1332 aaPredicted RBP35.05■■■■□ 3.2
FAM78B-201ENST00000338353 XPCQ01831 940 aaPredicted RBP35.05■■■■□ 3.2
FAM78B-201ENST00000338353 PMFBP1Q8TBY8 1022 aa35.04■■■■□ 3.2
FAM78B-201ENST00000338353 LRRC59Q96AG4 307 aaKnown RBP35.04■■■■□ 3.2
FAM78B-201ENST00000338353 NUDT16Q96DE0 195 aaKnown RBP35.04■■■■□ 3.2
FAM78B-201ENST00000338353 ATP7BP35670 1465 aa35.03■■■■□ 3.2
FAM78B-201ENST00000338353 SRPK2P78362 688 aaKnown RBP35.02■■■■□ 3.2
FAM78B-201ENST00000338353 MED1Q15648 1581 aaPredicted RBP35.01■■■■□ 3.19
FAM78B-201ENST00000338353 PXDNQ92626 1479 aa35■■■■□ 3.19
FAM78B-201ENST00000338353 CABP2Q9NPB3 220 aa35■■■■□ 3.19
FAM78B-201ENST00000338353 SHPRHQ149N8 1683 aa34.99■■■■□ 3.19
FAM78B-201ENST00000338353 ITSN1Q15811 1721 aa34.99■■■■□ 3.19
FAM78B-201ENST00000338353 EVC2Q86UK5 1308 aa34.98■■■■□ 3.19
FAM78B-201ENST00000338353 KRT28Q7Z3Y7 464 aa34.96■■■■□ 3.19
FAM78B-201ENST00000338353 CCDC61Q9Y6R9 512 aa34.94■■■■□ 3.18
FAM78B-201ENST00000338353 PNPLA6Q8IY17 1366 aa34.94■■■■□ 3.18
FAM78B-201ENST00000338353 PSME1Q06323 249 aa34.93■■■■□ 3.18
FAM78B-201ENST00000338353 SBNO2Q9Y2G9 1366 aa34.93■■■■□ 3.18
FAM78B-201ENST00000338353 TOPAZ1Q8N9V7 1692 aa34.93■■■■□ 3.18
FAM78B-201ENST00000338353 DISP3Q9P2K9 1392 aa34.92■■■■□ 3.18
FAM78B-201ENST00000338353 ST20-MTHFSA0A0A6YYL1 179 aa34.91■■■■□ 3.18
FAM78B-201ENST00000338353 NGDNQ8NEJ9 315 aaKnown RBP34.91■■■■□ 3.18
FAM78B-201ENST00000338353 SPATA31A6Q5VVP1 1343 aa34.91■■■■□ 3.18
FAM78B-201ENST00000338353 USP47Q96K76 1375 aa34.91■■■■□ 3.18
FAM78B-201ENST00000338353 NUTM2BA6NNL0 878 aaPredicted RBP34.87■■■■□ 3.17
FAM78B-201ENST00000338353 NUTM2EB1AL46 878 aaPredicted RBP34.87■■■■□ 3.17
FAM78B-201ENST00000338353 NUTM2AQ8IVF1 878 aaPredicted RBP34.87■■■■□ 3.17
FAM78B-201ENST00000338353 PPIP5K1Q6PFW1 1433 aa34.86■■■■□ 3.17
FAM78B-201ENST00000338353 LRP6O75581 1613 aa34.85■■■■□ 3.17
FAM78B-201ENST00000338353 SPATA31A3Q5VYP0 1347 aa34.84■■■■□ 3.17
FAM78B-201ENST00000338353 PLEKHG3A1L390 1219 aa34.83■■■■□ 3.17
FAM78B-201ENST00000338353 TESK2Q96S53 571 aa34.83■■■■□ 3.17
FAM78B-201ENST00000338353 ACEP12821 1306 aa34.83■■■■□ 3.17
FAM78B-201ENST00000338353 SBNO1A3KN83 1393 aa34.82■■■■□ 3.16
FAM78B-201ENST00000338353 TNS3Q68CZ2 1445 aa34.81■■■■□ 3.16
FAM78B-201ENST00000338353 PHF23Q9BUL5 403 aaPredicted RBP34.81■■■■□ 3.16
FAM78B-201ENST00000338353 CABP1Q9NZU7 370 aa34.81■■■■□ 3.16
FAM78B-201ENST00000338353 LMOD2Q6P5Q4 547 aa34.8■■■■□ 3.16
FAM78B-201ENST00000338353 POLR3AO14802 1390 aaPredicted RBP34.8■■■■□ 3.16
FAM78B-201ENST00000338353 TRPM3Q9HCF6 1732 aaPredicted RBP34.79■■■■□ 3.16
FAM78B-201ENST00000338353 COL22A1Q8NFW1 1626 aaPredicted RBP34.79■■■■□ 3.16
FAM78B-201ENST00000338353 MEX3CQ5U5Q3 659 aaKnown RBP34.79■■■■□ 3.16
FAM78B-201ENST00000338353 ATAD2Q6PL18 1390 aa34.78■■■■□ 3.16
FAM78B-201ENST00000338353 PAK3O75914 559 aaPredicted RBP34.75■■■■□ 3.15
FAM78B-201ENST00000338353 PLEKHG5O94827 1062 aa34.73■■■■□ 3.15
FAM78B-201ENST00000338353 SLC24A1O60721 1099 aa34.72■■■■□ 3.15
FAM78B-201ENST00000338353 ARHGEF10O15013 1369 aa34.72■■■■□ 3.15
FAM78B-201ENST00000338353 ALS2Q96Q42 1657 aa34.7■■■■□ 3.15
FAM78B-201ENST00000338353 ADAMTS2O95450 1211 aa34.7■■■■□ 3.15
FAM78B-201ENST00000338353 TMF1P82094 1093 aa34.68■■■■□ 3.14
FAM78B-201ENST00000338353 EIF4G2P78344 907 aaKnown RBP eCLIP34.66■■■■□ 3.14
FAM78B-201ENST00000338353 TMC1Q8TDI8 760 aa34.66■■■■□ 3.14
FAM78B-201ENST00000338353 CABLES1Q8TDN4 633 aa34.66■■■■□ 3.14
FAM78B-201ENST00000338353 PUS7Q96PZ0 661 aaKnown RBP34.66■■■■□ 3.14
FAM78B-201ENST00000338353 RGS17Q9UGC6 210 aaPredicted RBP34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms