RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SRPK2P78362 688 aaKnown RBP21.07■□□□□ 0.96
CDC42EP4-201ENST00000335793 RRAGDQ9NQL2 400 aaPredicted RBP21.07■□□□□ 0.96
CDC42EP4-201ENST00000335793 MADDQ8WXG6 1647 aa21.06■□□□□ 0.96
CDC42EP4-201ENST00000335793 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
CDC42EP4-201ENST00000335793 CABP2Q9NPB3 220 aa21.06■□□□□ 0.96
CDC42EP4-201ENST00000335793 NOS1P29475 1434 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 SEC24BO95487 1268 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 RARSP54136 660 aaKnown RBP21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 PMFBP1Q8TBY8 1022 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 ADGRL1O94910 1474 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 PTPRTO14522 1441 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 TRPM2O94759 1503 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 MAPK8IP3Q9UPT6 1336 aa21.05■□□□□ 0.96
CDC42EP4-201ENST00000335793 SYNMO15061 1565 aa21.03■□□□□ 0.96
CDC42EP4-201ENST00000335793 CLTCL1P53675 1640 aa21.03■□□□□ 0.96
CDC42EP4-201ENST00000335793 DNAJC5Q9H3Z4 198 aa21.02■□□□□ 0.96
CDC42EP4-201ENST00000335793 MYH16Q9H6N6 1097 aa21.02■□□□□ 0.96
CDC42EP4-201ENST00000335793 ERVK-7P63135 1459 aa21.02■□□□□ 0.96
CDC42EP4-201ENST00000335793 RLBP1P12271 317 aa21.02■□□□□ 0.96
CDC42EP4-201ENST00000335793 TSR2Q969E8 191 aaKnown RBP21.02■□□□□ 0.95
CDC42EP4-201ENST00000335793 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.95
CDC42EP4-201ENST00000335793 ZCCHC11Q5TAX3 1644 aaKnown RBP21.01■□□□□ 0.95
CDC42EP4-201ENST00000335793 PCDHB15Q9Y5E8 787 aa21.01■□□□□ 0.95
CDC42EP4-201ENST00000335793 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
CDC42EP4-201ENST00000335793 GGNBP2Q9H3C7 697 aa21■□□□□ 0.95
CDC42EP4-201ENST00000335793 PDZRN3Q9UPQ7 1066 aa21■□□□□ 0.95
CDC42EP4-201ENST00000335793 CFAP65Q6ZU64 1925 aaKnown RBP20.99■□□□□ 0.95
CDC42EP4-201ENST00000335793 EVC2Q86UK5 1308 aa20.99■□□□□ 0.95
CDC42EP4-201ENST00000335793 POLR3AO14802 1390 aaPredicted RBP20.98■□□□□ 0.95
CDC42EP4-201ENST00000335793 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
CDC42EP4-201ENST00000335793 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
CDC42EP4-201ENST00000335793 C14orf93Q9H972 538 aaKnown RBP20.97■□□□□ 0.95
CDC42EP4-201ENST00000335793 ATP7AQ04656 1500 aa20.97■□□□□ 0.95
CDC42EP4-201ENST00000335793 POGKQ9P215 609 aa20.97■□□□□ 0.95
CDC42EP4-201ENST00000335793 ZFYVE16Q7Z3T8 1539 aa20.97■□□□□ 0.95
CDC42EP4-201ENST00000335793 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
CDC42EP4-201ENST00000335793 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
CDC42EP4-201ENST00000335793 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
CDC42EP4-201ENST00000335793 WDR63Q8IWG1 891 aa20.96■□□□□ 0.95
CDC42EP4-201ENST00000335793 KDM5AP29375 1690 aaKnown RBP20.96■□□□□ 0.95
CDC42EP4-201ENST00000335793 ZKSCAN2Q63HK3 967 aa20.96■□□□□ 0.95
CDC42EP4-201ENST00000335793 IQGAP1P46940 1657 aa20.95■□□□□ 0.95
CDC42EP4-201ENST00000335793 FAM69CQ0P6D2 419 aa20.95■□□□□ 0.94
CDC42EP4-201ENST00000335793 VGFO15240 615 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP4-201ENST00000335793 SPHKAPQ2M3C7 1700 aa20.94■□□□□ 0.94
CDC42EP4-201ENST00000335793 DZIP1LQ8IYY4 767 aaKnown RBP20.94■□□□□ 0.94
CDC42EP4-201ENST00000335793 PNNQ9H307 717 aaKnown RBP20.94■□□□□ 0.94
CDC42EP4-201ENST00000335793 STAG3Q9UJ98 1225 aa20.94■□□□□ 0.94
CDC42EP4-201ENST00000335793 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
CDC42EP4-201ENST00000335793 MINK1Q8N4C8 1332 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP4-201ENST00000335793 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-201ENST00000335793 EXOSC9Q06265 439 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-201ENST00000335793 RAPGEF3O95398 923 aa20.92■□□□□ 0.94
CDC42EP4-201ENST00000335793 NINLQ9Y2I6 1382 aa20.89■□□□□ 0.94
CDC42EP4-201ENST00000335793 MVPQ14764 893 aaKnown RBP20.89■□□□□ 0.93
CDC42EP4-201ENST00000335793 UHRF1BP1LA0JNW5 1464 aa20.88■□□□□ 0.93
CDC42EP4-201ENST00000335793 RIPK4P57078 832 aa20.88■□□□□ 0.93
CDC42EP4-201ENST00000335793 TET3O43151 1660 aa20.88■□□□□ 0.93
CDC42EP4-201ENST00000335793 ARID3AQ99856 593 aa20.88■□□□□ 0.93
CDC42EP4-201ENST00000335793 CEP152O94986 1710 aa20.87■□□□□ 0.93
CDC42EP4-201ENST00000335793 USP19O94966 1318 aa20.86■□□□□ 0.93
CDC42EP4-201ENST00000335793 ASXL2Q76L83 1435 aa20.86■□□□□ 0.93
CDC42EP4-201ENST00000335793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDC42EP4-201ENST00000335793 RRP9O43818 475 aaKnown RBP20.86■□□□□ 0.93
CDC42EP4-201ENST00000335793 GZF1Q9H116 711 aaPredicted RBP20.86■□□□□ 0.93
CDC42EP4-201ENST00000335793 MAP3K4Q9Y6R4 1608 aa20.85■□□□□ 0.93
CDC42EP4-201ENST00000335793 TMPOP42166 694 aaKnown RBP20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 PDE4CQ08493 712 aa20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 TERF2IPQ9NYB0 399 aa20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 ABCA6Q8N139 1617 aa20.84■□□□□ 0.93
CDC42EP4-201ENST00000335793 MYOM2P54296 1465 aa20.83■□□□□ 0.93
CDC42EP4-201ENST00000335793 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.92
CDC42EP4-201ENST00000335793 AAMPQ13685 434 aa20.83■□□□□ 0.92
CDC42EP4-201ENST00000335793 IDI1Q13907 227 aa20.83■□□□□ 0.92
CDC42EP4-201ENST00000335793 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
CDC42EP4-201ENST00000335793 MYOM1P52179 1685 aa20.82■□□□□ 0.92
CDC42EP4-201ENST00000335793 TRIM27P14373 513 aa20.82■□□□□ 0.92
CDC42EP4-201ENST00000335793 PRAM1Q96QH2 718 aa20.82■□□□□ 0.92
CDC42EP4-201ENST00000335793 FBLN1P23142 703 aa20.82■□□□□ 0.92
CDC42EP4-201ENST00000335793 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
CDC42EP4-201ENST00000335793 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
CDC42EP4-201ENST00000335793 DDX19BQ9UMR2 479 aa20.81■□□□□ 0.92
CDC42EP4-201ENST00000335793 NPATQ14207 1427 aa20.81■□□□□ 0.92
CDC42EP4-201ENST00000335793 DIAPH1O60610 1272 aaKnown RBP20.8■□□□□ 0.92
CDC42EP4-201ENST00000335793 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
CDC42EP4-201ENST00000335793 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
CDC42EP4-201ENST00000335793 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
CDC42EP4-201ENST00000335793 FGD1P98174 961 aa20.79■□□□□ 0.92
CDC42EP4-201ENST00000335793 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
CDC42EP4-201ENST00000335793 TBC1D32Q96NH3 1257 aa20.79■□□□□ 0.92
CDC42EP4-201ENST00000335793 LNPKQ9C0E8 428 aa20.79■□□□□ 0.92
CDC42EP4-201ENST00000335793 KIF1BO60333 1816 aa20.79■□□□□ 0.92
CDC42EP4-201ENST00000335793 IPO8O15397 1037 aaKnown RBP20.78■□□□□ 0.92
CDC42EP4-201ENST00000335793 TMEM57Q8N5G2 664 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms