RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ABTB2Q8N961 1025 aa15.32■□□□□ 0.04
HDAC6-201ENST00000334136 PTPRTO14522 1441 aa15.32■□□□□ 0.04
HDAC6-201ENST00000334136 UGGT1Q9NYU2 1555 aa15.32■□□□□ 0.04
HDAC6-201ENST00000334136 EFCAB6Q5THR3 1501 aa15.32■□□□□ 0.04
HDAC6-201ENST00000334136 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
HDAC6-201ENST00000334136 NLRP1Q9C000 1473 aa15.32■□□□□ 0.04
HDAC6-201ENST00000334136 EIF2AK4Q9P2K8 1649 aaKnown RBP15.31■□□□□ 0.04
HDAC6-201ENST00000334136 ZMYM4Q5VZL5 1548 aa15.31■□□□□ 0.04
HDAC6-201ENST00000334136 CADPS2Q86UW7 1296 aa15.31■□□□□ 0.04
HDAC6-201ENST00000334136 IQGAP3Q86VI3 1631 aa15.31■□□□□ 0.04
HDAC6-201ENST00000334136 TRPM2O94759 1503 aa15.29■□□□□ 0.04
HDAC6-201ENST00000334136 UNC13BO14795 1591 aa15.29■□□□□ 0.04
HDAC6-201ENST00000334136 XPCQ01831 940 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-201ENST00000334136 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-201ENST00000334136 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
HDAC6-201ENST00000334136 RALGAPBQ86X10 1494 aa15.28■□□□□ 0.04
HDAC6-201ENST00000334136 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
HDAC6-201ENST00000334136 PHF8Q9UPP1 1060 aa15.28■□□□□ 0.04
HDAC6-201ENST00000334136 FOXO3O43524 673 aa15.28■□□□□ 0.04
HDAC6-201ENST00000334136 MSH6P52701 1360 aa15.27■□□□□ 0.04
HDAC6-201ENST00000334136 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
HDAC6-201ENST00000334136 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
HDAC6-201ENST00000334136 EVA1CP58658 441 aa15.26■□□□□ 0.03
HDAC6-201ENST00000334136 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
HDAC6-201ENST00000334136 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-201ENST00000334136 HSP90AA1P07900 732 aaKnown RBP15.25■□□□□ 0.03
HDAC6-201ENST00000334136 SPATA31E1Q6ZUB1 1445 aa15.25■□□□□ 0.03
HDAC6-201ENST00000334136 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
HDAC6-201ENST00000334136 CEP152O94986 1710 aa15.25■□□□□ 0.03
HDAC6-201ENST00000334136 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-201ENST00000334136 RICTORQ6R327 1708 aa15.24■□□□□ 0.03
HDAC6-201ENST00000334136 CLTCQ00610 1675 aaKnown RBP15.24■□□□□ 0.03
HDAC6-201ENST00000334136 RGS3P49796 1198 aa15.23■□□□□ 0.03
HDAC6-201ENST00000334136 KIF13AQ9H1H9 1805 aa15.23■□□□□ 0.03
HDAC6-201ENST00000334136 LMTK2Q8IWU2 1503 aa15.23■□□□□ 0.03
HDAC6-201ENST00000334136 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
HDAC6-201ENST00000334136 TOM1O60784 492 aa15.22■□□□□ 0.03
HDAC6-201ENST00000334136 MEX3CQ5U5Q3 659 aaKnown RBP15.22■□□□□ 0.03
HDAC6-201ENST00000334136 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
HDAC6-201ENST00000334136 KIF1BO60333 1816 aa15.22■□□□□ 0.03
HDAC6-201ENST00000334136 PLEKHG1Q9ULL1 1385 aa15.22■□□□□ 0.03
HDAC6-201ENST00000334136 NPHP4O75161 1426 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-201ENST00000334136 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.02
HDAC6-201ENST00000334136 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
HDAC6-201ENST00000334136 A2ML1A8K2U0 1454 aa15.2■□□□□ 0.02
HDAC6-201ENST00000334136 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-201ENST00000334136 PTPRMP28827 1452 aa15.19■□□□□ 0.02
HDAC6-201ENST00000334136 DIAPH1O60610 1272 aaKnown RBP15.19■□□□□ 0.02
HDAC6-201ENST00000334136 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
HDAC6-201ENST00000334136 CAMSAP1Q5T5Y3 1602 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-201ENST00000334136 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-201ENST00000334136 MTHFSP49914 203 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-201ENST00000334136 ABCC11Q96J66 1382 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 ACEP12821 1306 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 TESK2Q96S53 571 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 FRMPD1Q5SYB0 1578 aa15.18■□□□□ 0.02
HDAC6-201ENST00000334136 PPRC1Q5VV67 1664 aaKnown RBP15.17■□□□□ 0.02
HDAC6-201ENST00000334136 E9PCH4 1651 aa15.17■□□□□ 0.02
HDAC6-201ENST00000334136 METP08581 1390 aa15.17■□□□□ 0.02
HDAC6-201ENST00000334136 LMTK3Q96Q04 1460 aa15.17■□□□□ 0.02
HDAC6-201ENST00000334136 NSD3Q9BZ95 1437 aa15.17■□□□□ 0.02
HDAC6-201ENST00000334136 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
HDAC6-201ENST00000334136 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
HDAC6-201ENST00000334136 CLTCL1P53675 1640 aa15.16■□□□□ 0.02
HDAC6-201ENST00000334136 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
HDAC6-201ENST00000334136 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
HDAC6-201ENST00000334136 KDM4FA0A1W2PPD8 638 aa15.15■□□□□ 0.02
HDAC6-201ENST00000334136 NLRP2Q9NX02 1062 aa15.15■□□□□ 0.02
HDAC6-201ENST00000334136 NME9Q86XW9 330 aa15.14■□□□□ 0.01
HDAC6-201ENST00000334136 PRDM11Q9NQV5 511 aa15.14■□□□□ 0.01
HDAC6-201ENST00000334136 RIMS1Q86UR5 1692 aaKnown RBP15.14■□□□□ 0.01
HDAC6-201ENST00000334136 ZC3H6P61129 1189 aaKnown RBP15.14■□□□□ 0.01
HDAC6-201ENST00000334136 ERICH6BQ5W0A0 696 aa15.14■□□□□ 0.01
HDAC6-201ENST00000334136 ANP32BQ92688 251 aaKnown RBP15.14■□□□□ 0.01
HDAC6-201ENST00000334136 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
HDAC6-201ENST00000334136 MYOM2P54296 1465 aa15.13■□□□□ 0.01
HDAC6-201ENST00000334136 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
HDAC6-201ENST00000334136 PPP2R1AP30153 589 aa15.13■□□□□ 0.01
HDAC6-201ENST00000334136 IPO9Q96P70 1041 aaKnown RBP15.12■□□□□ 0.01
HDAC6-201ENST00000334136 PUS7Q96PZ0 661 aaKnown RBP15.12■□□□□ 0.01
HDAC6-201ENST00000334136 NINLQ9Y2I6 1382 aa15.12■□□□□ 0.01
HDAC6-201ENST00000334136 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
HDAC6-201ENST00000334136 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
HDAC6-201ENST00000334136 PIK3C2GO75747 1445 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 ZFYVE9O95405 1425 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 RRS1Q15050 365 aaKnown RBP15.1■□□□□ 0.01
HDAC6-201ENST00000334136 ADGRB3O60242 1522 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-201ENST00000334136 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 TMEM94Q12767 1356 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
HDAC6-201ENST00000334136 PLEKHH1Q9ULM0 1364 aa15.09■□□□□ 0.01
HDAC6-201ENST00000334136 HMOX1P09601 288 aa15.09■□□□□ 0.01
HDAC6-201ENST00000334136 ORAI2Q96SN7 254 aa15.09■□□□□ 0.01
HDAC6-201ENST00000334136 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms