RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 COG6Q9Y2V7 657 aa15.07■□□□□ 0
CSPG4P4Y-201ENST00000333235 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
CSPG4P4Y-201ENST00000333235 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
CSPG4P4Y-201ENST00000333235 STK26Q9P289 416 aa15.07■□□□□ 0
CSPG4P4Y-201ENST00000333235 NPATQ14207 1427 aa15.06■□□□□ 0
CSPG4P4Y-201ENST00000333235 RAPGEF3O95398 923 aa15.05■□□□□ 0
CSPG4P4Y-201ENST00000333235 PANK1Q8TE04 598 aa15.05■□□□□ 0
CSPG4P4Y-201ENST00000333235 CLUAP1Q96AJ1 413 aa15.05■□□□□ 0
CSPG4P4Y-201ENST00000333235 MYH16Q9H6N6 1097 aa15.05■□□□□ -0
CSPG4P4Y-201ENST00000333235 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
CSPG4P4Y-201ENST00000333235 NINLQ9Y2I6 1382 aa15.04■□□□□ -0
CSPG4P4Y-201ENST00000333235 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
CSPG4P4Y-201ENST00000333235 CABP2Q9NPB3 220 aa15.04■□□□□ -0
CSPG4P4Y-201ENST00000333235 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
CSPG4P4Y-201ENST00000333235 POGZQ7Z3K3 1410 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 MYOM1P52179 1685 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 POGKQ9P215 609 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 LMTK2Q8IWU2 1503 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 SLC4A3P48751 1232 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 WDR63Q8IWG1 891 aa15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
CSPG4P4Y-201ENST00000333235 BCL2L13Q9BXK5 485 aa15.02□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 MAPK8IP3Q9UPT6 1336 aa15.02□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 PMFBP1Q8TBY8 1022 aa15.02□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 ADGRB3O60242 1522 aa15.01□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 NRXN1Q9ULB1 1477 aa15.01□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 C8orf34Q49A92 452 aa15□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 MLH3Q9UHC1 1453 aa15□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 TERF2IPQ9NYB0 399 aa15□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 RARSP54136 660 aaKnown RBP15□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 AAMPQ13685 434 aa15□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 IGHDP01880 384 aa14.99□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 IDI1Q13907 227 aa14.99□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 NSD2O96028 1365 aa14.98□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 RWDD1Q9H446 243 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 MROH2AA6NES4 1674 aa14.96□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 CCDC27Q2M243 656 aa14.96□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 HDGFL2Q7Z4V5 671 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P4Y-201ENST00000333235 BECN1Q14457 450 aa14.95□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 HECW2Q9P2P5 1572 aa14.95□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 ZKSCAN2Q63HK3 967 aa14.94□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 ABCC3O15438 1527 aa14.94□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 PRAM1Q96QH2 718 aa14.93□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 QRICH2Q9H0J4 1663 aa14.92□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 DZIP1LQ8IYY4 767 aaKnown RBP14.92□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 IFT172Q9UG01 1749 aa14.91□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 NEO1Q92859 1461 aa14.9□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 RLBP1P12271 317 aa14.9□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P4Y-201ENST00000333235 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 A0A1W2PP64 1363 aa14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 RIPK4P57078 832 aa14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 PDZRN3Q9UPQ7 1066 aa14.88□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 PPLO60437 1756 aa14.88□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 GLI2P10070 1586 aa14.88□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 TNNQ9UQP3 1299 aa14.88□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 IPO8O15397 1037 aaKnown RBP14.87□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 GSE1Q14687 1217 aa14.87□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 FYB1O15117 783 aa14.87□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.87□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 ABCC11Q96J66 1382 aa14.86□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 DDX19BQ9UMR2 479 aa14.86□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 CABP1Q9NZU7 370 aa14.86□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 ARHGAP31Q2M1Z3 1444 aa14.85□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 TULP4Q9NRJ4 1543 aa14.84□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 IQSEC2Q5JU85 1478 aa14.84□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.03
CSPG4P4Y-201ENST00000333235 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.04
CSPG4P4Y-201ENST00000333235 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms