RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
CLN8-201ENST00000331222 RALYLQ86SE5 291 aaKnown RBP12.79□□□□□ -0.36
CLN8-201ENST00000331222 RAPGEF4Q8WZA2 1011 aa12.79□□□□□ -0.36
CLN8-201ENST00000331222 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
CLN8-201ENST00000331222 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
CLN8-201ENST00000331222 PIBF1Q8WXW3 757 aa12.79□□□□□ -0.36
CLN8-201ENST00000331222 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
CLN8-201ENST00000331222 ATP6V1DQ9Y5K8 247 aa12.79□□□□□ -0.36
CLN8-201ENST00000331222 SAFBQ15424 915 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLN8-201ENST00000331222 NLRP13Q86W25 1043 aa12.78□□□□□ -0.36
CLN8-201ENST00000331222 PLCD4Q9BRC7 762 aa12.78□□□□□ -0.36
CLN8-201ENST00000331222 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
CLN8-201ENST00000331222 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.36
CLN8-201ENST00000331222 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
CLN8-201ENST00000331222 CABP2Q9NPB3 220 aa12.77□□□□□ -0.37
CLN8-201ENST00000331222 FHOD3Q2V2M9 1422 aa12.77□□□□□ -0.37
CLN8-201ENST00000331222 DDX54Q8TDD1 881 aaKnown RBP12.76□□□□□ -0.37
CLN8-201ENST00000331222 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
CLN8-201ENST00000331222 ANKRD62A6NC57 917 aa12.76□□□□□ -0.37
CLN8-201ENST00000331222 MAP7D2Q96T17 732 aa12.76□□□□□ -0.37
CLN8-201ENST00000331222 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
CLN8-201ENST00000331222 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLN8-201ENST00000331222 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
CLN8-201ENST00000331222 PDE4AP27815 886 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 CDK5RAP3Q96JB5 506 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 CCDC144AA2RUR9 1427 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 CENPQQ7L2Z9 268 aaPredicted RBP12.75□□□□□ -0.37
CLN8-201ENST00000331222 SIL1Q9H173 461 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 NEFHP12036 1026 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 WDR70Q9NW82 654 aa12.75□□□□□ -0.37
CLN8-201ENST00000331222 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
CLN8-201ENST00000331222 BRMS1Q9HCU9 246 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 KRT18P05783 430 aaKnown RBP12.74□□□□□ -0.37
CLN8-201ENST00000331222 STK3Q13188 491 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 MYL6BP14649 208 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 OLFM4Q6UX06 510 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 ABTB2Q8N961 1025 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 AK7Q96M32 723 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
CLN8-201ENST00000331222 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
CLN8-201ENST00000331222 TMEM132EQ6IEE7 984 aa12.73□□□□□ -0.37
CLN8-201ENST00000331222 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
CLN8-201ENST00000331222 REC8O95072 547 aa12.73□□□□□ -0.37
CLN8-201ENST00000331222 BICDL1Q6ZP65 573 aa12.73□□□□□ -0.37
CLN8-201ENST00000331222 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
CLN8-201ENST00000331222 SMC2O95347 1197 aa12.72□□□□□ -0.37
CLN8-201ENST00000331222 MPNDQ8N594 471 aa12.72□□□□□ -0.37
CLN8-201ENST00000331222 E9PSI1 815 aa12.72□□□□□ -0.37
CLN8-201ENST00000331222 CALRP27797 417 aaKnown RBP12.72□□□□□ -0.37
CLN8-201ENST00000331222 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
CLN8-201ENST00000331222 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
CLN8-201ENST00000331222 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
CLN8-201ENST00000331222 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
CLN8-201ENST00000331222 TEX35Q5T0J7 233 aa12.71□□□□□ -0.37
CLN8-201ENST00000331222 MNS1Q8NEH6 495 aa12.71□□□□□ -0.37
CLN8-201ENST00000331222 SYCP1Q15431 976 aa12.71□□□□□ -0.37
CLN8-201ENST00000331222 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
CLN8-201ENST00000331222 ZSCAN29Q8IWY8 852 aaPredicted RBP12.71□□□□□ -0.37
CLN8-201ENST00000331222 SPC24Q8NBT2 197 aa12.71□□□□□ -0.37
CLN8-201ENST00000331222 CCDC73Q6ZRK6 1079 aa12.71□□□□□ -0.38
CLN8-201ENST00000331222 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.38
CLN8-201ENST00000331222 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.38
CLN8-201ENST00000331222 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
CLN8-201ENST00000331222 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
CLN8-201ENST00000331222 SDF4Q9BRK5 362 aa12.7□□□□□ -0.38
CLN8-201ENST00000331222 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
CLN8-201ENST00000331222 NLRP6P59044 892 aa12.7□□□□□ -0.38
CLN8-201ENST00000331222 SEPT11Q9NVA2 429 aaKnown RBP12.7□□□□□ -0.38
CLN8-201ENST00000331222 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
CLN8-201ENST00000331222 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
CLN8-201ENST00000331222 XPCQ01831 940 aaPredicted RBP12.69□□□□□ -0.38
CLN8-201ENST00000331222 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
CLN8-201ENST00000331222 ERC2O15083 957 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 XBP1P17861 261 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 FMN1Q68DA7 1419 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 GSE1Q14687 1217 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
CLN8-201ENST00000331222 NUP133Q8WUM0 1156 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 CCDC173Q0VFZ6 552 aa12.68□□□□□ -0.38
CLN8-201ENST00000331222 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
CLN8-201ENST00000331222 TANGO6Q9C0B7 1094 aa12.67□□□□□ -0.38
CLN8-201ENST00000331222 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
CLN8-201ENST00000331222 CCDC18Q5T9S5 1454 aa12.67□□□□□ -0.38
CLN8-201ENST00000331222 WIZO95785 1651 aa12.67□□□□□ -0.38
CLN8-201ENST00000331222 SKOR2Q2VWA4 1001 aaPredicted RBP12.67□□□□□ -0.38
CLN8-201ENST00000331222 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
CLN8-201ENST00000331222 CENPHQ9H3R5 247 aa12.66□□□□□ -0.38
CLN8-201ENST00000331222 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
CLN8-201ENST00000331222 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
CLN8-201ENST00000331222 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLN8-201ENST00000331222 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
CLN8-201ENST00000331222 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
CLN8-201ENST00000331222 USP5P45974 858 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms