RNA–Protein interactions for RNA: ENST00000329559.7

NDUFB1-201, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 1 (best) BASIC

Gene NDUFB1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-201ENST00000329559 ROBO1Q9Y6N7 1651 aa28.76■■■□□ 2.19
NDUFB1-201ENST00000329559 MST1RQ04912 1400 aa28.76■■■□□ 2.19
NDUFB1-201ENST00000329559 NBPF8Q3BBV2 869 aa28.72■■■□□ 2.19
NDUFB1-201ENST00000329559 CLSPNQ9HAW4 1339 aa28.71■■■□□ 2.19
NDUFB1-201ENST00000329559 SAFB2Q14151 953 aaKnown RBP eCLIP28.71■■■□□ 2.19
NDUFB1-201ENST00000329559 POGKQ9P215 609 aa28.71■■■□□ 2.19
NDUFB1-201ENST00000329559 CDC42BPGQ6DT37 1551 aa28.69■■■□□ 2.18
NDUFB1-201ENST00000329559 BRINP3Q76B58 766 aa28.68■■■□□ 2.18
NDUFB1-201ENST00000329559 C1orf167Q5SNV9 1468 aa28.67■■■□□ 2.18
NDUFB1-201ENST00000329559 TRPM1Q7Z4N2 1603 aa28.67■■■□□ 2.18
NDUFB1-201ENST00000329559 CCER1Q8TC90 406 aaPredicted RBP28.66■■■□□ 2.18
NDUFB1-201ENST00000329559 ARHGEF28Q8N1W1 1705 aaKnown RBP28.64■■■□□ 2.18
NDUFB1-201ENST00000329559 ORAI2Q96SN7 254 aa28.61■■■□□ 2.17
NDUFB1-201ENST00000329559 NUTM2FA1L443 756 aa28.6■■■□□ 2.17
NDUFB1-201ENST00000329559 MINK1Q8N4C8 1332 aaPredicted RBP28.6■■■□□ 2.17
NDUFB1-201ENST00000329559 ROCK2O75116 1388 aaKnown RBP28.6■■■□□ 2.17
NDUFB1-201ENST00000329559 HIRIP3Q9BW71 556 aaPredicted RBP28.59■■■□□ 2.17
NDUFB1-201ENST00000329559 FMN2Q9NZ56 1722 aa28.58■■■□□ 2.17
NDUFB1-201ENST00000329559 ADGRB2O60241 1585 aa28.57■■■□□ 2.16
NDUFB1-201ENST00000329559 AHDC1Q5TGY3 1603 aaPredicted RBP28.57■■■□□ 2.16
NDUFB1-201ENST00000329559 PHLPP1O60346 1717 aa28.56■■■□□ 2.16
NDUFB1-201ENST00000329559 GPRASP1Q5JY77 1395 aa28.56■■■□□ 2.16
NDUFB1-201ENST00000329559 TIMELESSQ9UNS1 1208 aa28.56■■■□□ 2.16
NDUFB1-201ENST00000329559 ESCO1Q5FWF5 840 aa28.54■■■□□ 2.16
NDUFB1-201ENST00000329559 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
NDUFB1-201ENST00000329559 RALGAPBQ86X10 1494 aa28.53■■■□□ 2.16
NDUFB1-201ENST00000329559 COL16A1Q07092 1604 aaPredicted RBP28.53■■■□□ 2.16
NDUFB1-201ENST00000329559 WASLO00401 505 aaPredicted RBP28.52■■■□□ 2.16
NDUFB1-201ENST00000329559 NHSL1Q5SYE7 1610 aa28.51■■■□□ 2.15
NDUFB1-201ENST00000329559 CENPJQ9HC77 1338 aaPredicted RBP28.51■■■□□ 2.15
NDUFB1-201ENST00000329559 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
NDUFB1-201ENST00000329559 ANKARQ7Z5J8 1434 aa28.46■■■□□ 2.15
NDUFB1-201ENST00000329559 USP32Q8NFA0 1604 aa28.46■■■□□ 2.15
NDUFB1-201ENST00000329559 PRR36Q9H6K5 1346 aa28.45■■■□□ 2.15
NDUFB1-201ENST00000329559 RGPD8O14715 1765 aaPredicted RBP28.45■■■□□ 2.15
NDUFB1-201ENST00000329559 CDK19Q9BWU1 502 aa28.45■■■□□ 2.14
NDUFB1-201ENST00000329559 JCADQ9P266 1359 aa28.44■■■□□ 2.14
NDUFB1-201ENST00000329559 TULP4Q9NRJ4 1543 aa28.43■■■□□ 2.14
NDUFB1-201ENST00000329559 EIF3AQ14152 1382 aaKnown RBP28.43■■■□□ 2.14
NDUFB1-201ENST00000329559 FOXO3O43524 673 aa28.43■■■□□ 2.14
NDUFB1-201ENST00000329559 SOS2Q07890 1332 aaPredicted RBP28.43■■■□□ 2.14
NDUFB1-201ENST00000329559 QRICH2Q9H0J4 1663 aa28.42■■■□□ 2.14
NDUFB1-201ENST00000329559 PHF8Q9UPP1 1060 aa28.42■■■□□ 2.14
NDUFB1-201ENST00000329559 NPHP3Q7Z494 1330 aa28.41■■■□□ 2.14
NDUFB1-201ENST00000329559 LRRC59Q96AG4 307 aaKnown RBP28.4■■■□□ 2.14
NDUFB1-201ENST00000329559 NUDT16Q96DE0 195 aaKnown RBP28.39■■■□□ 2.14
NDUFB1-201ENST00000329559 KIF1AQ12756 1690 aa28.38■■■□□ 2.13
NDUFB1-201ENST00000329559 XPCQ01831 940 aaPredicted RBP28.37■■■□□ 2.13
NDUFB1-201ENST00000329559 PMFBP1Q8TBY8 1022 aa28.37■■■□□ 2.13
NDUFB1-201ENST00000329559 ATP7BP35670 1465 aa28.37■■■□□ 2.13
NDUFB1-201ENST00000329559 PXDNQ92626 1479 aa28.37■■■□□ 2.13
NDUFB1-201ENST00000329559 MED1Q15648 1581 aaPredicted RBP28.36■■■□□ 2.13
NDUFB1-201ENST00000329559 SHPRHQ149N8 1683 aa28.34■■■□□ 2.13
NDUFB1-201ENST00000329559 SRPK2P78362 688 aaKnown RBP28.33■■■□□ 2.13
NDUFB1-201ENST00000329559 KRT28Q7Z3Y7 464 aa28.33■■■□□ 2.13
NDUFB1-201ENST00000329559 CABP2Q9NPB3 220 aa28.33■■■□□ 2.13
NDUFB1-201ENST00000329559 PNPLA6Q8IY17 1366 aa28.32■■■□□ 2.12
NDUFB1-201ENST00000329559 SPATA31A6Q5VVP1 1343 aa28.31■■■□□ 2.12
NDUFB1-201ENST00000329559 EVC2Q86UK5 1308 aa28.31■■■□□ 2.12
NDUFB1-201ENST00000329559 SBNO2Q9Y2G9 1366 aa28.3■■■□□ 2.12
NDUFB1-201ENST00000329559 CCDC61Q9Y6R9 512 aa28.3■■■□□ 2.12
NDUFB1-201ENST00000329559 DISP3Q9P2K9 1392 aa28.29■■■□□ 2.12
NDUFB1-201ENST00000329559 PSME1Q06323 249 aa28.29■■■□□ 2.12
NDUFB1-201ENST00000329559 ST20-MTHFSA0A0A6YYL1 179 aa28.27■■■□□ 2.12
NDUFB1-201ENST00000329559 ITSN1Q15811 1721 aa28.26■■■□□ 2.12
NDUFB1-201ENST00000329559 TOPAZ1Q8N9V7 1692 aa28.26■■■□□ 2.12
NDUFB1-201ENST00000329559 NGDNQ8NEJ9 315 aaKnown RBP28.26■■■□□ 2.11
NDUFB1-201ENST00000329559 SPATA31A3Q5VYP0 1347 aa28.25■■■□□ 2.11
NDUFB1-201ENST00000329559 PLEKHG3A1L390 1219 aa28.25■■■□□ 2.11
NDUFB1-201ENST00000329559 LRP6O75581 1613 aa28.25■■■□□ 2.11
NDUFB1-201ENST00000329559 USP47Q96K76 1375 aa28.24■■■□□ 2.11
NDUFB1-201ENST00000329559 NUTM2BA6NNL0 878 aaPredicted RBP28.23■■■□□ 2.11
NDUFB1-201ENST00000329559 NUTM2EB1AL46 878 aaPredicted RBP28.23■■■□□ 2.11
NDUFB1-201ENST00000329559 NUTM2AQ8IVF1 878 aaPredicted RBP28.23■■■□□ 2.11
NDUFB1-201ENST00000329559 TESK2Q96S53 571 aa28.23■■■□□ 2.11
NDUFB1-201ENST00000329559 PPIP5K1Q6PFW1 1433 aa28.22■■■□□ 2.11
NDUFB1-201ENST00000329559 SBNO1A3KN83 1393 aa28.22■■■□□ 2.11
NDUFB1-201ENST00000329559 ACEP12821 1306 aa28.21■■■□□ 2.11
NDUFB1-201ENST00000329559 POLR3AO14802 1390 aaPredicted RBP28.21■■■□□ 2.11
NDUFB1-201ENST00000329559 TNS3Q68CZ2 1445 aa28.19■■■□□ 2.1
NDUFB1-201ENST00000329559 COL22A1Q8NFW1 1626 aaPredicted RBP28.19■■■□□ 2.1
NDUFB1-201ENST00000329559 CABP1Q9NZU7 370 aa28.19■■■□□ 2.1
NDUFB1-201ENST00000329559 PHF23Q9BUL5 403 aaPredicted RBP28.17■■■□□ 2.1
NDUFB1-201ENST00000329559 TRPM3Q9HCF6 1732 aaPredicted RBP28.17■■■□□ 2.1
NDUFB1-201ENST00000329559 ATAD2Q6PL18 1390 aa28.14■■■□□ 2.1
NDUFB1-201ENST00000329559 MEX3CQ5U5Q3 659 aaKnown RBP28.14■■■□□ 2.1
NDUFB1-201ENST00000329559 RGS17Q9UGC6 210 aaPredicted RBP28.14■■■□□ 2.1
NDUFB1-201ENST00000329559 LMOD2Q6P5Q4 547 aa28.13■■■□□ 2.09
NDUFB1-201ENST00000329559 SLC24A1O60721 1099 aa28.12■■■□□ 2.09
NDUFB1-201ENST00000329559 ARHGEF10O15013 1369 aa28.11■■■□□ 2.09
NDUFB1-201ENST00000329559 PAK3O75914 559 aaPredicted RBP28.11■■■□□ 2.09
NDUFB1-201ENST00000329559 PUS7Q96PZ0 661 aaKnown RBP28.11■■■□□ 2.09
NDUFB1-201ENST00000329559 ALS2Q96Q42 1657 aa28.1■■■□□ 2.09
NDUFB1-201ENST00000329559 ADAMTS2O95450 1211 aa28.09■■■□□ 2.09
NDUFB1-201ENST00000329559 CABLES1Q8TDN4 633 aa28.08■■■□□ 2.09
NDUFB1-201ENST00000329559 PLEKHG5O94827 1062 aa28.06■■■□□ 2.08
NDUFB1-201ENST00000329559 TMF1P82094 1093 aa28.06■■■□□ 2.08
NDUFB1-201ENST00000329559 USP6P35125 1406 aa28.05■■■□□ 2.08
NDUFB1-201ENST00000329559 C8orf37Q96NL8 207 aa28.05■■■□□ 2.08
NDUFB1-201ENST00000329559 EIF4G2P78344 907 aaKnown RBP eCLIP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms