RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ABTB2Q8N961 1025 aa14.08□□□□□ -0.16
COL4A5-201ENST00000328300 ZNF428Q96B54 188 aa14.08□□□□□ -0.16
COL4A5-201ENST00000328300 WDR7Q9Y4E6 1490 aa14.07□□□□□ -0.16
COL4A5-201ENST00000328300 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
COL4A5-201ENST00000328300 NBPF8Q3BBV2 869 aa14.07□□□□□ -0.16
COL4A5-201ENST00000328300 NBPF1Q3BBV0 1214 aa14.07□□□□□ -0.16
COL4A5-201ENST00000328300 TCOF1Q13428 1488 aaKnown RBP14.07□□□□□ -0.16
COL4A5-201ENST00000328300 ESCO1Q5FWF5 840 aa14.07□□□□□ -0.16
COL4A5-201ENST00000328300 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
COL4A5-201ENST00000328300 NSD2O96028 1365 aa14.06□□□□□ -0.16
COL4A5-201ENST00000328300 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
COL4A5-201ENST00000328300 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
COL4A5-201ENST00000328300 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
COL4A5-201ENST00000328300 ATP10BO94823 1461 aa14.06□□□□□ -0.16
COL4A5-201ENST00000328300 RPRD2Q5VT52 1461 aaKnown RBP14.06□□□□□ -0.16
COL4A5-201ENST00000328300 IPO9Q96P70 1041 aaKnown RBP14.06□□□□□ -0.16
COL4A5-201ENST00000328300 TPM4P67936 248 aa14.06□□□□□ -0.16
COL4A5-201ENST00000328300 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
COL4A5-201ENST00000328300 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
COL4A5-201ENST00000328300 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 NUP160Q12769 1436 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 AMOTL1Q8IY63 956 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 CRBNQ96SW2 442 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 GNAI3P08754 354 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 ANKRD45Q5TZF3 282 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 KCNH5Q8NCM2 988 aa14.05□□□□□ -0.16
COL4A5-201ENST00000328300 ERC2O15083 957 aa14.04□□□□□ -0.16
COL4A5-201ENST00000328300 TATP17735 454 aaPredicted RBP14.04□□□□□ -0.16
COL4A5-201ENST00000328300 G3BP1Q13283 466 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL4A5-201ENST00000328300 FRAT2O75474 233 aaPredicted RBP14.04□□□□□ -0.16
COL4A5-201ENST00000328300 NOL10Q9BSC4 688 aaKnown RBP14.04□□□□□ -0.16
COL4A5-201ENST00000328300 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
COL4A5-201ENST00000328300 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
COL4A5-201ENST00000328300 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
COL4A5-201ENST00000328300 TCP11L2Q8N4U5 519 aa14.03□□□□□ -0.16
COL4A5-201ENST00000328300 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
COL4A5-201ENST00000328300 IFIT2P09913 472 aaKnown RBP14.03□□□□□ -0.16
COL4A5-201ENST00000328300 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
COL4A5-201ENST00000328300 COG6Q9Y2V7 657 aa14.03□□□□□ -0.16
COL4A5-201ENST00000328300 ELL2O00472 640 aaPredicted RBP14.03□□□□□ -0.16
COL4A5-201ENST00000328300 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
COL4A5-201ENST00000328300 PHF14O94880 888 aa14.02□□□□□ -0.16
COL4A5-201ENST00000328300 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.16
COL4A5-201ENST00000328300 EIF4G3O43432 1585 aaKnown RBP14.02□□□□□ -0.16
COL4A5-201ENST00000328300 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.16
COL4A5-201ENST00000328300 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.16
COL4A5-201ENST00000328300 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.16
COL4A5-201ENST00000328300 CFAP43Q8NDM7 1665 aa14.02□□□□□ -0.16
COL4A5-201ENST00000328300 PDE3AQ14432 1141 aa14.02□□□□□ -0.17
COL4A5-201ENST00000328300 SPG7Q9UQ90 795 aa14.02□□□□□ -0.17
COL4A5-201ENST00000328300 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
COL4A5-201ENST00000328300 CABP1Q9NZU7 370 aa14.02□□□□□ -0.17
COL4A5-201ENST00000328300 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.17
COL4A5-201ENST00000328300 RNF20Q5VTR2 975 aa14.02□□□□□ -0.17
COL4A5-201ENST00000328300 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.17
COL4A5-201ENST00000328300 FCHSD2O94868 740 aa14.01□□□□□ -0.17
COL4A5-201ENST00000328300 ZKSCAN1P17029 563 aaPredicted RBP14.01□□□□□ -0.17
COL4A5-201ENST00000328300 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
COL4A5-201ENST00000328300 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
COL4A5-201ENST00000328300 DDX11L8A8MPP1 907 aa14□□□□□ -0.17
COL4A5-201ENST00000328300 PRKAR2BP31323 418 aa14□□□□□ -0.17
COL4A5-201ENST00000328300 HMOX1P09601 288 aa14□□□□□ -0.17
COL4A5-201ENST00000328300 ABCC2Q92887 1545 aa13.99□□□□□ -0.17
COL4A5-201ENST00000328300 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
COL4A5-201ENST00000328300 BCL2L13Q9BXK5 485 aa13.99□□□□□ -0.17
COL4A5-201ENST00000328300 A2MP01023 1474 aa13.99□□□□□ -0.17
COL4A5-201ENST00000328300 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
COL4A5-201ENST00000328300 SLC12A5Q9H2X9 1139 aa13.99□□□□□ -0.17
COL4A5-201ENST00000328300 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
COL4A5-201ENST00000328300 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
COL4A5-201ENST00000328300 RIC3Q7Z5B4 369 aa13.98□□□□□ -0.17
COL4A5-201ENST00000328300 ERC1Q8IUD2 1116 aa13.98□□□□□ -0.17
COL4A5-201ENST00000328300 USP35Q9P2H5 1018 aa13.98□□□□□ -0.17
COL4A5-201ENST00000328300 UBTFL1P0CB47 393 aaPredicted RBP13.98□□□□□ -0.17
COL4A5-201ENST00000328300 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
COL4A5-201ENST00000328300 PDE4AP27815 886 aa13.97□□□□□ -0.17
COL4A5-201ENST00000328300 SKOR2Q2VWA4 1001 aaPredicted RBP13.97□□□□□ -0.17
COL4A5-201ENST00000328300 NUDT16Q96DE0 195 aaKnown RBP13.97□□□□□ -0.17
COL4A5-201ENST00000328300 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
COL4A5-201ENST00000328300 NSD3Q9BZ95 1437 aa13.97□□□□□ -0.17
COL4A5-201ENST00000328300 RILPL2Q969X0 211 aa13.97□□□□□ -0.17
COL4A5-201ENST00000328300 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
COL4A5-201ENST00000328300 CCT4P50991 539 aaKnown RBP13.96□□□□□ -0.17
COL4A5-201ENST00000328300 TNRQ92752 1358 aa13.96□□□□□ -0.17
COL4A5-201ENST00000328300 C14orf93Q9H972 538 aaKnown RBP13.96□□□□□ -0.17
COL4A5-201ENST00000328300 EIF2AK4Q9P2K8 1649 aaKnown RBP13.96□□□□□ -0.18
COL4A5-201ENST00000328300 GCC1Q96CN9 775 aa13.96□□□□□ -0.18
COL4A5-201ENST00000328300 HIP1O00291 1037 aa13.95□□□□□ -0.18
COL4A5-201ENST00000328300 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
COL4A5-201ENST00000328300 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
COL4A5-201ENST00000328300 TWISTNBQ3B726 338 aaPredicted RBP13.95□□□□□ -0.18
COL4A5-201ENST00000328300 KIF6Q6ZMV9 814 aa13.95□□□□□ -0.18
COL4A5-201ENST00000328300 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
COL4A5-201ENST00000328300 PLIN1O60240 522 aa13.94□□□□□ -0.18
COL4A5-201ENST00000328300 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
COL4A5-201ENST00000328300 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
COL4A5-201ENST00000328300 SYCP2Q9BX26 1530 aa13.93□□□□□ -0.18
COL4A5-201ENST00000328300 SYTL4Q96C24 671 aaPredicted RBP13.93□□□□□ -0.18
COL4A5-201ENST00000328300 TAOK2Q9UL54 1235 aa13.93□□□□□ -0.18
COL4A5-201ENST00000328300 KIAA2012Q0VF49 1180 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms