RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 MADDQ8WXG6 1647 aa13.83□□□□□ -0.2
CUL4A-201ENST00000326335 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
CUL4A-201ENST00000326335 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
CUL4A-201ENST00000326335 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
CUL4A-201ENST00000326335 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
CUL4A-201ENST00000326335 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
CUL4A-201ENST00000326335 PPRC1Q5VV67 1664 aaKnown RBP13.8□□□□□ -0.2
CUL4A-201ENST00000326335 ABCA9Q8IUA7 1624 aa13.8□□□□□ -0.2
CUL4A-201ENST00000326335 NME9Q86XW9 330 aa13.79□□□□□ -0.2
CUL4A-201ENST00000326335 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
CUL4A-201ENST00000326335 RNF123Q5XPI4 1314 aa13.79□□□□□ -0.2
CUL4A-201ENST00000326335 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
CUL4A-201ENST00000326335 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
CUL4A-201ENST00000326335 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
CUL4A-201ENST00000326335 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
CUL4A-201ENST00000326335 RUNDC1Q96C34 613 aa13.78□□□□□ -0.2
CUL4A-201ENST00000326335 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
CUL4A-201ENST00000326335 E9PSI1 815 aa13.78□□□□□ -0.2
CUL4A-201ENST00000326335 RIPK4P57078 832 aa13.78□□□□□ -0.2
CUL4A-201ENST00000326335 SLC52A1Q9NWF4 448 aa13.78□□□□□ -0.2
CUL4A-201ENST00000326335 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.2
CUL4A-201ENST00000326335 FYB1O15117 783 aa13.77□□□□□ -0.2
CUL4A-201ENST00000326335 TET3O43151 1660 aa13.77□□□□□ -0.2
CUL4A-201ENST00000326335 ABCA6Q8N139 1617 aa13.77□□□□□ -0.2
CUL4A-201ENST00000326335 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
CUL4A-201ENST00000326335 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
CUL4A-201ENST00000326335 SMC4Q9NTJ3 1288 aa13.77□□□□□ -0.21
CUL4A-201ENST00000326335 RNF17Q9BXT8 1623 aaKnown RBP13.76□□□□□ -0.21
CUL4A-201ENST00000326335 IGHDP01880 384 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 RLBP1P12271 317 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
CUL4A-201ENST00000326335 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 MROH2AA6NES4 1674 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 FANCIQ9NVI1 1328 aa13.76□□□□□ -0.21
CUL4A-201ENST00000326335 NEFMP07197 916 aa13.75□□□□□ -0.21
CUL4A-201ENST00000326335 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
CUL4A-201ENST00000326335 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
CUL4A-201ENST00000326335 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
CUL4A-201ENST00000326335 MROH1Q8NDA8 1641 aa13.74□□□□□ -0.21
CUL4A-201ENST00000326335 KIF1BO60333 1816 aa13.74□□□□□ -0.21
CUL4A-201ENST00000326335 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
CUL4A-201ENST00000326335 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
CUL4A-201ENST00000326335 DIAPH1O60610 1272 aaKnown RBP13.73□□□□□ -0.21
CUL4A-201ENST00000326335 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
CUL4A-201ENST00000326335 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 APBB1O00213 710 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
CUL4A-201ENST00000326335 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 PIK3C2GO75747 1445 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 ABCC3O15438 1527 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 FRMPD1Q5SYB0 1578 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 ARXQ96QS3 562 aa13.72□□□□□ -0.21
CUL4A-201ENST00000326335 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.21
CUL4A-201ENST00000326335 RPGRIP1LQ68CZ1 1315 aa13.71□□□□□ -0.21
CUL4A-201ENST00000326335 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.22
CUL4A-201ENST00000326335 ZNF428Q96B54 188 aa13.71□□□□□ -0.22
CUL4A-201ENST00000326335 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
CUL4A-201ENST00000326335 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
CUL4A-201ENST00000326335 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
CUL4A-201ENST00000326335 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
CUL4A-201ENST00000326335 RARSP54136 660 aaKnown RBP13.69□□□□□ -0.22
CUL4A-201ENST00000326335 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
CUL4A-201ENST00000326335 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
CUL4A-201ENST00000326335 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
CUL4A-201ENST00000326335 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
CUL4A-201ENST00000326335 NUDT16Q96DE0 195 aaKnown RBP13.68□□□□□ -0.22
CUL4A-201ENST00000326335 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
CUL4A-201ENST00000326335 PCDHB15Q9Y5E8 787 aa13.67□□□□□ -0.22
CUL4A-201ENST00000326335 IQGAP1P46940 1657 aa13.67□□□□□ -0.22
CUL4A-201ENST00000326335 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
CUL4A-201ENST00000326335 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
CUL4A-201ENST00000326335 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
CUL4A-201ENST00000326335 YTHDC2Q9H6S0 1430 aaKnown RBP13.66□□□□□ -0.22
CUL4A-201ENST00000326335 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
CUL4A-201ENST00000326335 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
CUL4A-201ENST00000326335 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
CUL4A-201ENST00000326335 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
CUL4A-201ENST00000326335 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
CUL4A-201ENST00000326335 METP08581 1390 aa13.65□□□□□ -0.22
CUL4A-201ENST00000326335 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
CUL4A-201ENST00000326335 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-201ENST00000326335 COG3Q96JB2 828 aa13.65□□□□□ -0.22
CUL4A-201ENST00000326335 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
CUL4A-201ENST00000326335 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-201ENST00000326335 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
CUL4A-201ENST00000326335 LTKP29376 864 aa13.64□□□□□ -0.23
CUL4A-201ENST00000326335 SYNMO15061 1565 aa13.64□□□□□ -0.23
CUL4A-201ENST00000326335 DEPDC5O75140 1603 aa13.64□□□□□ -0.23
CUL4A-201ENST00000326335 SEC24BO95487 1268 aa13.64□□□□□ -0.23
CUL4A-201ENST00000326335 MYT1Q01538 1121 aa13.64□□□□□ -0.23
CUL4A-201ENST00000326335 MYOM2P54296 1465 aa13.64□□□□□ -0.23
CUL4A-201ENST00000326335 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
CUL4A-201ENST00000326335 ADGRB3O60242 1522 aa13.63□□□□□ -0.23
CUL4A-201ENST00000326335 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
CUL4A-201ENST00000326335 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
CUL4A-201ENST00000326335 WASLO00401 505 aaPredicted RBP13.63□□□□□ -0.23
CUL4A-201ENST00000326335 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
CUL4A-201ENST00000326335 SULT6B1Q6IMI4 303 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms