RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
ABCF1-201ENST00000326195 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
ABCF1-201ENST00000326195 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
ABCF1-201ENST00000326195 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
ABCF1-201ENST00000326195 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
ABCF1-201ENST00000326195 MYO5BQ9ULV0 1848 aa13.68□□□□□ -0.22
ABCF1-201ENST00000326195 PANK3Q9H999 370 aa13.67□□□□□ -0.22
ABCF1-201ENST00000326195 MROH2AA6NES4 1674 aa13.67□□□□□ -0.22
ABCF1-201ENST00000326195 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
ABCF1-201ENST00000326195 KIF1BO60333 1816 aa13.66□□□□□ -0.22
ABCF1-201ENST00000326195 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
ABCF1-201ENST00000326195 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
ABCF1-201ENST00000326195 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
ABCF1-201ENST00000326195 FBLN1P23142 703 aa13.65□□□□□ -0.22
ABCF1-201ENST00000326195 SPATA31D1Q6ZQQ2 1576 aa13.65□□□□□ -0.22
ABCF1-201ENST00000326195 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
ABCF1-201ENST00000326195 TESK2Q96S53 571 aa13.65□□□□□ -0.23
ABCF1-201ENST00000326195 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
ABCF1-201ENST00000326195 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
ABCF1-201ENST00000326195 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
ABCF1-201ENST00000326195 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
ABCF1-201ENST00000326195 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
ABCF1-201ENST00000326195 PKNOX2Q96KN3 472 aa13.63□□□□□ -0.23
ABCF1-201ENST00000326195 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
ABCF1-201ENST00000326195 YTHDC2Q9H6S0 1430 aaKnown RBP13.62□□□□□ -0.23
ABCF1-201ENST00000326195 FOXO3O43524 673 aa13.62□□□□□ -0.23
ABCF1-201ENST00000326195 ADGRB3O60242 1522 aa13.62□□□□□ -0.23
ABCF1-201ENST00000326195 NPHP4O75161 1426 aaPredicted RBP13.61□□□□□ -0.23
ABCF1-201ENST00000326195 PIK3C2GO75747 1445 aa13.61□□□□□ -0.23
ABCF1-201ENST00000326195 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
ABCF1-201ENST00000326195 TMEM131LA2VDJ0 1609 aa13.61□□□□□ -0.23
ABCF1-201ENST00000326195 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
ABCF1-201ENST00000326195 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
ABCF1-201ENST00000326195 ATF3P18847 181 aa13.6□□□□□ -0.23
ABCF1-201ENST00000326195 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
ABCF1-201ENST00000326195 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
ABCF1-201ENST00000326195 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
ABCF1-201ENST00000326195 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
ABCF1-201ENST00000326195 NEXMIFQ5QGS0 1516 aa13.6□□□□□ -0.23
ABCF1-201ENST00000326195 EIF3AQ14152 1382 aaKnown RBP13.6□□□□□ -0.23
ABCF1-201ENST00000326195 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
ABCF1-201ENST00000326195 KNSTRNQ9Y448 316 aa13.59□□□□□ -0.23
ABCF1-201ENST00000326195 ZFYVE9O95405 1425 aa13.59□□□□□ -0.23
ABCF1-201ENST00000326195 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
ABCF1-201ENST00000326195 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
ABCF1-201ENST00000326195 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
ABCF1-201ENST00000326195 PLEKHG1Q9ULL1 1385 aa13.58□□□□□ -0.24
ABCF1-201ENST00000326195 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
ABCF1-201ENST00000326195 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
ABCF1-201ENST00000326195 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
ABCF1-201ENST00000326195 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
ABCF1-201ENST00000326195 GSE1Q14687 1217 aa13.57□□□□□ -0.24
ABCF1-201ENST00000326195 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
ABCF1-201ENST00000326195 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
ABCF1-201ENST00000326195 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
ABCF1-201ENST00000326195 MYO3AQ8NEV4 1616 aa13.55□□□□□ -0.24
ABCF1-201ENST00000326195 ALKQ9UM73 1620 aa13.55□□□□□ -0.24
ABCF1-201ENST00000326195 PSME1Q06323 249 aa13.55□□□□□ -0.24
ABCF1-201ENST00000326195 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
ABCF1-201ENST00000326195 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
ABCF1-201ENST00000326195 LMTK3Q96Q04 1460 aa13.54□□□□□ -0.24
ABCF1-201ENST00000326195 PDE4AP27815 886 aa13.52□□□□□ -0.24
ABCF1-201ENST00000326195 UBR1Q8IWV7 1749 aa13.52□□□□□ -0.24
ABCF1-201ENST00000326195 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
ABCF1-201ENST00000326195 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
ABCF1-201ENST00000326195 SKAP1Q86WV1 359 aa13.52□□□□□ -0.25
ABCF1-201ENST00000326195 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
ABCF1-201ENST00000326195 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
ABCF1-201ENST00000326195 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 HDGFL2Q7Z4V5 671 aaPredicted RBP13.51□□□□□ -0.25
ABCF1-201ENST00000326195 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 CARD14Q9BXL6 1004 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 MYOM2P54296 1465 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 NME9Q86XW9 330 aa13.51□□□□□ -0.25
ABCF1-201ENST00000326195 NFKBIBQ15653 356 aa13.5□□□□□ -0.25
ABCF1-201ENST00000326195 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
ABCF1-201ENST00000326195 ABCC11Q96J66 1382 aa13.5□□□□□ -0.25
ABCF1-201ENST00000326195 ACEP12821 1306 aa13.49□□□□□ -0.25
ABCF1-201ENST00000326195 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
ABCF1-201ENST00000326195 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
ABCF1-201ENST00000326195 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
ABCF1-201ENST00000326195 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
ABCF1-201ENST00000326195 BACH2Q9BYV9 841 aa13.48□□□□□ -0.25
ABCF1-201ENST00000326195 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
ABCF1-201ENST00000326195 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
ABCF1-201ENST00000326195 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
ABCF1-201ENST00000326195 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
ABCF1-201ENST00000326195 PPLO60437 1756 aa13.47□□□□□ -0.25
ABCF1-201ENST00000326195 NLRP6P59044 892 aa13.47□□□□□ -0.25
ABCF1-201ENST00000326195 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
ABCF1-201ENST00000326195 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
ABCF1-201ENST00000326195 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
ABCF1-201ENST00000326195 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
ABCF1-201ENST00000326195 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.25
ABCF1-201ENST00000326195 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
ABCF1-201ENST00000326195 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.26
ABCF1-201ENST00000326195 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
ABCF1-201ENST00000326195 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms