RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
CLGN-201ENST00000325617 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
CLGN-201ENST00000325617 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
CLGN-201ENST00000325617 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
CLGN-201ENST00000325617 RAPGEF3O95398 923 aa16.86■□□□□ 0.29
CLGN-201ENST00000325617 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
CLGN-201ENST00000325617 POGKQ9P215 609 aa16.84■□□□□ 0.29
CLGN-201ENST00000325617 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
CLGN-201ENST00000325617 PDE3AQ14432 1141 aa16.83■□□□□ 0.28
CLGN-201ENST00000325617 MAP3K4Q9Y6R4 1608 aa16.82■□□□□ 0.28
CLGN-201ENST00000325617 TET3O43151 1660 aa16.82■□□□□ 0.28
CLGN-201ENST00000325617 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
CLGN-201ENST00000325617 NPC1L1Q9UHC9 1359 aa16.81■□□□□ 0.28
CLGN-201ENST00000325617 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
CLGN-201ENST00000325617 EXOSC9Q06265 439 aaKnown RBP16.81■□□□□ 0.28
CLGN-201ENST00000325617 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
CLGN-201ENST00000325617 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
CLGN-201ENST00000325617 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
CLGN-201ENST00000325617 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
CLGN-201ENST00000325617 UBE2Q2Q8WVN8 375 aa16.79■□□□□ 0.28
CLGN-201ENST00000325617 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
CLGN-201ENST00000325617 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
CLGN-201ENST00000325617 KIF1BO60333 1816 aa16.78■□□□□ 0.28
CLGN-201ENST00000325617 MROH1Q8NDA8 1641 aa16.78■□□□□ 0.28
CLGN-201ENST00000325617 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
CLGN-201ENST00000325617 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.27
CLGN-201ENST00000325617 ASXL2Q76L83 1435 aa16.77■□□□□ 0.27
CLGN-201ENST00000325617 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.27
CLGN-201ENST00000325617 CFAP53Q96M91 514 aa16.77■□□□□ 0.27
CLGN-201ENST00000325617 STAC3Q96MF2 364 aa16.77■□□□□ 0.27
CLGN-201ENST00000325617 GZF1Q9H116 711 aaPredicted RBP16.76■□□□□ 0.27
CLGN-201ENST00000325617 NPATQ14207 1427 aa16.76■□□□□ 0.27
CLGN-201ENST00000325617 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
CLGN-201ENST00000325617 SLC24A1O60721 1099 aa16.75■□□□□ 0.27
CLGN-201ENST00000325617 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
CLGN-201ENST00000325617 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
CLGN-201ENST00000325617 DEPDC5O75140 1603 aa16.75■□□□□ 0.27
CLGN-201ENST00000325617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLGN-201ENST00000325617 IDI1Q13907 227 aa16.74■□□□□ 0.27
CLGN-201ENST00000325617 TBC1D2Q9BYX2 928 aa16.74■□□□□ 0.27
CLGN-201ENST00000325617 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
CLGN-201ENST00000325617 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
CLGN-201ENST00000325617 TRIM27P14373 513 aa16.73■□□□□ 0.27
CLGN-201ENST00000325617 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
CLGN-201ENST00000325617 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
CLGN-201ENST00000325617 UHRF1BP1LA0JNW5 1464 aa16.72■□□□□ 0.27
CLGN-201ENST00000325617 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
CLGN-201ENST00000325617 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
CLGN-201ENST00000325617 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
CLGN-201ENST00000325617 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
CLGN-201ENST00000325617 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
CLGN-201ENST00000325617 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
CLGN-201ENST00000325617 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLGN-201ENST00000325617 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 EFCAB6Q5THR3 1501 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 ZNF518AQ6AHZ1 1483 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
CLGN-201ENST00000325617 RIPK4P57078 832 aa16.71■□□□□ 0.27
CLGN-201ENST00000325617 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
CLGN-201ENST00000325617 MYOM2P54296 1465 aa16.7■□□□□ 0.26
CLGN-201ENST00000325617 HMOX1P09601 288 aa16.7■□□□□ 0.26
CLGN-201ENST00000325617 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
CLGN-201ENST00000325617 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
CLGN-201ENST00000325617 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
CLGN-201ENST00000325617 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
CLGN-201ENST00000325617 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
CLGN-201ENST00000325617 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
CLGN-201ENST00000325617 LNPKQ9C0E8 428 aa16.69■□□□□ 0.26
CLGN-201ENST00000325617 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
CLGN-201ENST00000325617 A0A1W2PP64 1363 aa16.68■□□□□ 0.26
CLGN-201ENST00000325617 FYB1O15117 783 aa16.68■□□□□ 0.26
CLGN-201ENST00000325617 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
CLGN-201ENST00000325617 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
CLGN-201ENST00000325617 BECN1Q14457 450 aa16.67■□□□□ 0.26
CLGN-201ENST00000325617 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
CLGN-201ENST00000325617 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
CLGN-201ENST00000325617 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
CLGN-201ENST00000325617 CD109Q6YHK3 1445 aa16.67■□□□□ 0.26
CLGN-201ENST00000325617 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
CLGN-201ENST00000325617 CABP1Q9NZU7 370 aa16.66■□□□□ 0.26
CLGN-201ENST00000325617 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
CLGN-201ENST00000325617 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
CLGN-201ENST00000325617 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
CLGN-201ENST00000325617 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
CLGN-201ENST00000325617 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
CLGN-201ENST00000325617 IFT172Q9UG01 1749 aa16.65■□□□□ 0.26
CLGN-201ENST00000325617 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.26
CLGN-201ENST00000325617 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.26
CLGN-201ENST00000325617 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
CLGN-201ENST00000325617 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
CLGN-201ENST00000325617 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
CLGN-201ENST00000325617 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
CLGN-201ENST00000325617 NRXN1Q9ULB1 1477 aa16.63■□□□□ 0.25
CLGN-201ENST00000325617 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
CLGN-201ENST00000325617 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
CLGN-201ENST00000325617 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
CLGN-201ENST00000325617 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms