RNA–Protein interactions for RNA: ENST00000324022.14

GYPA-201, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 751 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-201ENST00000324022 C3orf80F5H4A9 247 aa4.87□□□□□ -1.63
GYPA-201ENST00000324022 SWT1Q5T5J6 900 aaKnown RBP4.87□□□□□ -1.63
GYPA-201ENST00000324022 IFNLR1Q8IU57 520 aaPredicted RBP4.87□□□□□ -1.63
GYPA-201ENST00000324022 MRGPRX2Q96LB1 330 aa4.87□□□□□ -1.63
GYPA-201ENST00000324022 ZFP42Q96MM3 310 aa4.87□□□□□ -1.63
GYPA-201ENST00000324022 TRIM26Q12899 539 aaPredicted RBP4.86□□□□□ -1.63
GYPA-201ENST00000324022 WHAMMQ8TF30 809 aa4.86□□□□□ -1.63
GYPA-201ENST00000324022 FAM198AQ9UFP1 575 aa4.86□□□□□ -1.63
GYPA-201ENST00000324022 CAPN5O15484 640 aaPredicted RBP4.85□□□□□ -1.63
GYPA-201ENST00000324022 PRSS12P56730 875 aa4.85□□□□□ -1.63
GYPA-201ENST00000324022 SCO2A0A1W2PP80 73 aa4.84□□□□□ -1.63
GYPA-201ENST00000324022 PPFIA3O75145 1194 aa4.84□□□□□ -1.63
GYPA-201ENST00000324022 FZD5Q13467 585 aa4.84□□□□□ -1.63
GYPA-201ENST00000324022 CRISPLD2Q9H0B8 497 aa4.84□□□□□ -1.63
GYPA-201ENST00000324022 FCF1Q9Y324 198 aaKnown RBP4.84□□□□□ -1.63
GYPA-201ENST00000324022 ACIN1Q9UKV3 1341 aaKnown RBP4.83□□□□□ -1.64
GYPA-201ENST00000324022 ZBTB24O43167 697 aaPredicted RBP4.83□□□□□ -1.64
GYPA-201ENST00000324022 NR1I2O75469 434 aa4.83□□□□□ -1.64
GYPA-201ENST00000324022 REPIN1Q9BWE0 567 aaKnown RBP4.83□□□□□ -1.64
GYPA-201ENST00000324022 FKBP8Q14318 412 aa4.82□□□□□ -1.64
GYPA-201ENST00000324022 NUDT18Q6ZVK8 323 aa4.82□□□□□ -1.64
GYPA-201ENST00000324022 NBPF11Q86T75 865 aa4.82□□□□□ -1.64
GYPA-201ENST00000324022 SUPT5HO00267 1087 aaKnown RBP4.81□□□□□ -1.64
GYPA-201ENST00000324022 GPR161Q8N6U8 529 aaKnown RBP4.81□□□□□ -1.64
GYPA-201ENST00000324022 COL25A1Q9BXS0 654 aaPredicted RBP4.81□□□□□ -1.64
GYPA-201ENST00000324022 SOBPA7XYQ1 873 aa4.8□□□□□ -1.64
GYPA-201ENST00000324022 ACTN4O43707 911 aaKnown RBP4.8□□□□□ -1.64
GYPA-201ENST00000324022 ITGB7P26010 798 aa4.8□□□□□ -1.64
GYPA-201ENST00000324022 TXKP42681 527 aa4.79□□□□□ -1.64
GYPA-201ENST00000324022 ZFP64Q9NPA5 681 aa4.79□□□□□ -1.64
GYPA-201ENST00000324022 MAP3K10Q02779 954 aa4.78□□□□□ -1.64
GYPA-201ENST00000324022 TSR1Q2NL82 804 aaKnown RBP4.78□□□□□ -1.64
GYPA-201ENST00000324022 KMT5BQ4FZB7 885 aa4.78□□□□□ -1.64
GYPA-201ENST00000324022 BEND7Q8N7W2 519 aaPredicted RBP4.78□□□□□ -1.64
GYPA-201ENST00000324022 CERKQ8TCT0 537 aa4.77□□□□□ -1.65
GYPA-201ENST00000324022 SPSB2Q99619 263 aa4.77□□□□□ -1.65
GYPA-201ENST00000324022 CNTNAP5Q8WYK1 1306 aa4.76□□□□□ -1.65
GYPA-201ENST00000324022 SHROOM4Q9ULL8 1493 aa4.76□□□□□ -1.65
GYPA-201ENST00000324022 MAP3K7O43318 606 aa4.76□□□□□ -1.65
GYPA-201ENST00000324022 ERICH6Q7L0X2 663 aa4.76□□□□□ -1.65
GYPA-201ENST00000324022 GTF3C3Q9Y5Q9 886 aa4.76□□□□□ -1.65
GYPA-201ENST00000324022 ALDH1A1P00352 501 aa4.75□□□□□ -1.65
GYPA-201ENST00000324022 EN1Q05925 392 aaPredicted RBP4.75□□□□□ -1.65
GYPA-201ENST00000324022 SCARF1Q14162 830 aa4.75□□□□□ -1.65
GYPA-201ENST00000324022 ARTNQ5T4W7 220 aa4.75□□□□□ -1.65
GYPA-201ENST00000324022 PODNQ7Z5L7 613 aa4.75□□□□□ -1.65
GYPA-201ENST00000324022 ENAMQ9NRM1 1142 aa4.75□□□□□ -1.65
GYPA-201ENST00000324022 RNFT1Q5M7Z0 435 aa4.74□□□□□ -1.65
GYPA-201ENST00000324022 SEMA6BQ9H3T3 888 aa4.74□□□□□ -1.65
GYPA-201ENST00000324022 CLSPNQ9HAW4 1339 aa4.73□□□□□ -1.65
GYPA-201ENST00000324022 PDE4AP27815 886 aa4.73□□□□□ -1.65
GYPA-201ENST00000324022 TRIM32Q13049 653 aa4.73□□□□□ -1.65
GYPA-201ENST00000324022 NEUROD1Q13562 356 aa4.73□□□□□ -1.65
GYPA-201ENST00000324022 SCUBE3Q8IX30 993 aa4.73□□□□□ -1.65
GYPA-201ENST00000324022 EMILIN3Q9NT22 766 aa4.73□□□□□ -1.65
GYPA-201ENST00000324022 MRPL14Q6P1L8 145 aaKnown RBP4.72□□□□□ -1.65
GYPA-201ENST00000324022 MAN1A2O60476 641 aa4.71□□□□□ -1.66
GYPA-201ENST00000324022 LYPD4Q6UWN0 246 aa4.71□□□□□ -1.66
GYPA-201ENST00000324022 PURBQ96QR8 312 aaKnown RBP4.71□□□□□ -1.66
GYPA-201ENST00000324022 BCL11AQ9H165 835 aa4.71□□□□□ -1.66
GYPA-201ENST00000324022 KRBA1A5PL33 1030 aa4.7□□□□□ -1.66
GYPA-201ENST00000324022 PAX4O43316 350 aa4.7□□□□□ -1.66
GYPA-201ENST00000324022 RC3H1Q5TC82 1133 aaKnown RBP4.68□□□□□ -1.66
GYPA-201ENST00000324022 DIEXFQ68CQ4 756 aaKnown RBP4.68□□□□□ -1.66
GYPA-201ENST00000324022 NANOS1Q8WY41 292 aaKnown RBP4.68□□□□□ -1.66
GYPA-201ENST00000324022 WASF2Q9Y6W5 498 aa4.68□□□□□ -1.66
GYPA-201ENST00000324022 NCKAP5LQ9HCH0 1330 aa4.68□□□□□ -1.66
GYPA-201ENST00000324022 CELA2BP08218 269 aaPredicted RBP4.67□□□□□ -1.66
GYPA-201ENST00000324022 CFHP08603 1231 aa4.67□□□□□ -1.66
GYPA-201ENST00000324022 FOXD4L6Q3SYB3 417 aaPredicted RBP4.67□□□□□ -1.66
GYPA-201ENST00000324022 FOXD4L3Q6VB84 417 aaPredicted RBP4.67□□□□□ -1.66
GYPA-201ENST00000324022 DDX12PQ92771 950 aa4.67□□□□□ -1.66
GYPA-201ENST00000324022 DDX27Q96GQ7 796 aaKnown RBP4.67□□□□□ -1.66
GYPA-201ENST00000324022 ANP32EQ9BTT0 268 aa4.67□□□□□ -1.66
GYPA-201ENST00000324022 RBM27Q9P2N5 1060 aaKnown RBP4.67□□□□□ -1.66
GYPA-201ENST00000324022 ADAMTS2O95450 1211 aa4.66□□□□□ -1.66
GYPA-201ENST00000324022 NBR1Q14596 966 aa4.66□□□□□ -1.66
GYPA-201ENST00000324022 MCTP1Q6DN14 999 aa4.66□□□□□ -1.66
GYPA-201ENST00000324022 ZCCHC6Q5VYS8 1495 aaKnown RBP4.66□□□□□ -1.66
GYPA-201ENST00000324022 ALYREFQ86V81 257 aaKnown RBP4.65□□□□□ -1.67
GYPA-201ENST00000324022 FMNL2Q96PY5 1086 aa4.65□□□□□ -1.67
GYPA-201ENST00000324022 WNT7BP56706 349 aa4.62□□□□□ -1.67
GYPA-201ENST00000324022 CCER1Q8TC90 406 aaPredicted RBP4.62□□□□□ -1.67
GYPA-201ENST00000324022 PRKCSHP14314 528 aaPredicted RBP4.61□□□□□ -1.67
GYPA-201ENST00000324022 SRSF11Q05519 484 aaKnown RBP4.61□□□□□ -1.67
GYPA-201ENST00000324022 FAM160A2Q8N612 972 aaPredicted RBP4.61□□□□□ -1.67
GYPA-201ENST00000324022 NEDD1Q8NHV4 660 aa4.61□□□□□ -1.67
GYPA-201ENST00000324022 LARP6Q9BRS8 491 aaKnown RBP4.61□□□□□ -1.67
GYPA-201ENST00000324022 LOC105371045A0A1W2PR82 267 aa4.6□□□□□ -1.67
GYPA-201ENST00000324022 FAM9AQ8IZU1 332 aaPredicted RBP4.6□□□□□ -1.67
GYPA-201ENST00000324022 SKOR1P84550 965 aa4.59□□□□□ -1.67
GYPA-201ENST00000324022 EYA1Q99502 592 aa4.59□□□□□ -1.67
GYPA-201ENST00000324022 PRDM9Q9NQV7 894 aa4.59□□□□□ -1.67
GYPA-201ENST00000324022 SIAH2O43255 324 aa4.58□□□□□ -1.68
GYPA-201ENST00000324022 PUS10Q3MIT2 529 aaKnown RBP4.58□□□□□ -1.68
GYPA-201ENST00000324022 TTC13Q8NBP0 860 aa4.58□□□□□ -1.68
GYPA-201ENST00000324022 THAP11Q96EK4 314 aa4.58□□□□□ -1.68
GYPA-201ENST00000324022 MFSD10Q14728 455 aa4.57□□□□□ -1.68
GYPA-201ENST00000324022 YTHDC1Q96MU7 727 aaKnown RBP4.57□□□□□ -1.68
GYPA-201ENST00000324022 FMNL1O95466 1100 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms