RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 LRP6O75581 1613 aa25.81■■□□□ 1.72
TYMS-202ENST00000323250 SIRT1Q96EB6 747 aa25.81■■□□□ 1.72
TYMS-202ENST00000323250 NHSL1Q5SYE7 1610 aa25.81■■□□□ 1.72
TYMS-202ENST00000323250 KNDC1Q76NI1 1749 aa25.8■■□□□ 1.72
TYMS-202ENST00000323250 CDC42BPGQ6DT37 1551 aa25.79■■□□□ 1.72
TYMS-202ENST00000323250 NUTM2FA1L443 756 aa25.79■■□□□ 1.72
TYMS-202ENST00000323250 ADGRB1O14514 1584 aa25.78■■□□□ 1.72
TYMS-202ENST00000323250 POTEAQ6S8J7 498 aa25.78■■□□□ 1.72
TYMS-202ENST00000323250 SPATA31A6Q5VVP1 1343 aa25.78■■□□□ 1.72
TYMS-202ENST00000323250 PRAM1Q96QH2 718 aa25.77■■□□□ 1.72
TYMS-202ENST00000323250 LAMC1P11047 1609 aa25.77■■□□□ 1.72
TYMS-202ENST00000323250 SAFB2Q14151 953 aaKnown RBP eCLIP25.76■■□□□ 1.71
TYMS-202ENST00000323250 LRRC59Q96AG4 307 aaKnown RBP25.76■■□□□ 1.71
TYMS-202ENST00000323250 ESCO1Q5FWF5 840 aa25.75■■□□□ 1.71
TYMS-202ENST00000323250 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
TYMS-202ENST00000323250 SOS2Q07890 1332 aaPredicted RBP25.74■■□□□ 1.71
TYMS-202ENST00000323250 NUTM2BA6NNL0 878 aaPredicted RBP25.73■■□□□ 1.71
TYMS-202ENST00000323250 NUTM2EB1AL46 878 aaPredicted RBP25.73■■□□□ 1.71
TYMS-202ENST00000323250 NUTM2AQ8IVF1 878 aaPredicted RBP25.73■■□□□ 1.71
TYMS-202ENST00000323250 STAC3Q96MF2 364 aa25.73■■□□□ 1.71
TYMS-202ENST00000323250 TRAK1Q9UPV9 953 aa25.73■■□□□ 1.71
TYMS-202ENST00000323250 PNPLA6Q8IY17 1366 aa25.72■■□□□ 1.71
TYMS-202ENST00000323250 DLC1Q96QB1 1528 aa25.7■■□□□ 1.7
TYMS-202ENST00000323250 FOXO3O43524 673 aa25.69■■□□□ 1.7
TYMS-202ENST00000323250 XPCQ01831 940 aaPredicted RBP25.68■■□□□ 1.7
TYMS-202ENST00000323250 SIN3AQ96ST3 1273 aa25.68■■□□□ 1.7
TYMS-202ENST00000323250 POGKQ9P215 609 aa25.68■■□□□ 1.7
TYMS-202ENST00000323250 MEX3CQ5U5Q3 659 aaKnown RBP25.67■■□□□ 1.7
TYMS-202ENST00000323250 FMN2Q9NZ56 1722 aa25.66■■□□□ 1.7
TYMS-202ENST00000323250 HIRIP3Q9BW71 556 aaPredicted RBP25.64■■□□□ 1.7
TYMS-202ENST00000323250 PXDNQ92626 1479 aa25.64■■□□□ 1.69
TYMS-202ENST00000323250 NPHP3Q7Z494 1330 aa25.63■■□□□ 1.69
TYMS-202ENST00000323250 NBPF1Q3BBV0 1214 aa25.62■■□□□ 1.69
TYMS-202ENST00000323250 MINK1Q8N4C8 1332 aaPredicted RBP25.62■■□□□ 1.69
TYMS-202ENST00000323250 L3MBTL2Q969R5 705 aa25.61■■□□□ 1.69
TYMS-202ENST00000323250 PHF8Q9UPP1 1060 aa25.58■■□□□ 1.69
TYMS-202ENST00000323250 ADAMTS2O95450 1211 aa25.57■■□□□ 1.68
TYMS-202ENST00000323250 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
TYMS-202ENST00000323250 C8orf37Q96NL8 207 aa25.56■■□□□ 1.68
TYMS-202ENST00000323250 AFF2P51816 1311 aa25.56■■□□□ 1.68
TYMS-202ENST00000323250 PRR36Q9H6K5 1346 aa25.56■■□□□ 1.68
TYMS-202ENST00000323250 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
TYMS-202ENST00000323250 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
TYMS-202ENST00000323250 ZNF772Q68DY9 489 aaPredicted RBP25.55■■□□□ 1.68
TYMS-202ENST00000323250 KRT28Q7Z3Y7 464 aa25.55■■□□□ 1.68
TYMS-202ENST00000323250 RGPD8O14715 1765 aaPredicted RBP25.54■■□□□ 1.68
TYMS-202ENST00000323250 WASLO00401 505 aaPredicted RBP25.54■■□□□ 1.68
TYMS-202ENST00000323250 USP32Q8NFA0 1604 aa25.54■■□□□ 1.68
TYMS-202ENST00000323250 PMFBP1Q8TBY8 1022 aa25.53■■□□□ 1.68
TYMS-202ENST00000323250 SPATA31A3Q5VYP0 1347 aa25.52■■□□□ 1.68
TYMS-202ENST00000323250 ANKARQ7Z5J8 1434 aa25.52■■□□□ 1.68
TYMS-202ENST00000323250 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.68
TYMS-202ENST00000323250 KIF1AQ12756 1690 aa25.5■■□□□ 1.67
TYMS-202ENST00000323250 COL22A1Q8NFW1 1626 aaPredicted RBP25.5■■□□□ 1.67
TYMS-202ENST00000323250 KIAA1210Q9ULL0 1709 aa25.5■■□□□ 1.67
TYMS-202ENST00000323250 NGLY1Q96IV0 654 aa25.48■■□□□ 1.67
TYMS-202ENST00000323250 PSME1Q06323 249 aa25.46■■□□□ 1.67
TYMS-202ENST00000323250 TULP4Q9NRJ4 1543 aa25.46■■□□□ 1.67
TYMS-202ENST00000323250 CDK19Q9BWU1 502 aa25.44■■□□□ 1.66
TYMS-202ENST00000323250 RXRBP28702 533 aa25.43■■□□□ 1.66
TYMS-202ENST00000323250 NUDT16Q96DE0 195 aaKnown RBP25.43■■□□□ 1.66
TYMS-202ENST00000323250 QTRT2Q9H974 415 aaKnown RBP25.43■■□□□ 1.66
TYMS-202ENST00000323250 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
TYMS-202ENST00000323250 FNBP4Q8N3X1 1017 aaPredicted RBP25.42■■□□□ 1.66
TYMS-202ENST00000323250 TNS3Q68CZ2 1445 aa25.42■■□□□ 1.66
TYMS-202ENST00000323250 SBNO1A3KN83 1393 aa25.42■■□□□ 1.66
TYMS-202ENST00000323250 EIF3AQ14152 1382 aaKnown RBP25.42■■□□□ 1.66
TYMS-202ENST00000323250 CABLES1Q8TDN4 633 aa25.41■■□□□ 1.66
TYMS-202ENST00000323250 ATP7BP35670 1465 aa25.4■■□□□ 1.66
TYMS-202ENST00000323250 PLEKHG5O94827 1062 aa25.4■■□□□ 1.66
TYMS-202ENST00000323250 USP21Q9UK80 565 aa25.39■■□□□ 1.66
TYMS-202ENST00000323250 LMOD2Q6P5Q4 547 aa25.38■■□□□ 1.65
TYMS-202ENST00000323250 CENPJQ9HC77 1338 aaPredicted RBP25.37■■□□□ 1.65
TYMS-202ENST00000323250 NGDNQ8NEJ9 315 aaKnown RBP25.36■■□□□ 1.65
TYMS-202ENST00000323250 BCL9LQ86UU0 1499 aa25.35■■□□□ 1.65
TYMS-202ENST00000323250 TRPM1Q7Z4N2 1603 aa25.35■■□□□ 1.65
TYMS-202ENST00000323250 RBM6P78332 1123 aaKnown RBP25.35■■□□□ 1.65
TYMS-202ENST00000323250 GPRASP1Q5JY77 1395 aa25.33■■□□□ 1.65
TYMS-202ENST00000323250 TRPM3Q9HCF6 1732 aaPredicted RBP25.33■■□□□ 1.65
TYMS-202ENST00000323250 ARHGEF10O15013 1369 aa25.32■■□□□ 1.64
TYMS-202ENST00000323250 ROCK2O75116 1388 aaKnown RBP25.32■■□□□ 1.64
TYMS-202ENST00000323250 CABP2Q9NPB3 220 aa25.32■■□□□ 1.64
TYMS-202ENST00000323250 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
TYMS-202ENST00000323250 TRPC5Q9UL62 973 aaPredicted RBP25.31■■□□□ 1.64
TYMS-202ENST00000323250 CDK12Q9NYV4 1490 aaPredicted RBP25.31■■□□□ 1.64
TYMS-202ENST00000323250 RGS12O14924 1447 aa25.3■■□□□ 1.64
TYMS-202ENST00000323250 ATRNO75882 1429 aa25.3■■□□□ 1.64
TYMS-202ENST00000323250 PLEKHG3A1L390 1219 aa25.29■■□□□ 1.64
TYMS-202ENST00000323250 ACEP12821 1306 aa25.29■■□□□ 1.64
TYMS-202ENST00000323250 PAK3O75914 559 aaPredicted RBP25.28■■□□□ 1.64
TYMS-202ENST00000323250 HAP1P54257 671 aaPredicted RBP25.28■■□□□ 1.64
TYMS-202ENST00000323250 SRPK2P78362 688 aaKnown RBP25.28■■□□□ 1.64
TYMS-202ENST00000323250 MARF1Q9Y4F3 1742 aaKnown RBP25.28■■□□□ 1.64
TYMS-202ENST00000323250 POLR3AO14802 1390 aaPredicted RBP25.28■■□□□ 1.64
TYMS-202ENST00000323250 SLIT2O94813 1529 aa25.27■■□□□ 1.64
TYMS-202ENST00000323250 TONSLQ96HA7 1378 aa25.27■■□□□ 1.64
TYMS-202ENST00000323250 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
TYMS-202ENST00000323250 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
TYMS-202ENST00000323250 QRICH2Q9H0J4 1663 aa25.26■■□□□ 1.63
TYMS-202ENST00000323250 FAM83GA6ND36 823 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms