RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 HFM1A2PYH4 1435 aa29.79■■■□□ 2.36
SSNA1-201ENST00000322310 BCL9LQ86UU0 1499 aa29.77■■■□□ 2.36
SSNA1-201ENST00000322310 ESCO1Q5FWF5 840 aa29.77■■■□□ 2.36
SSNA1-201ENST00000322310 ZRANB1Q9UGI0 708 aa29.77■■■□□ 2.36
SSNA1-201ENST00000322310 NPHP3Q7Z494 1330 aa29.75■■■□□ 2.35
SSNA1-201ENST00000322310 PXDNQ92626 1479 aa29.75■■■□□ 2.35
SSNA1-201ENST00000322310 XPCQ01831 940 aaPredicted RBP29.75■■■□□ 2.35
SSNA1-201ENST00000322310 NAIPQ13075 1403 aa29.75■■■□□ 2.35
SSNA1-201ENST00000322310 CDC42BPGQ6DT37 1551 aa29.73■■■□□ 2.35
SSNA1-201ENST00000322310 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
SSNA1-201ENST00000322310 FOXO3O43524 673 aa29.71■■■□□ 2.35
SSNA1-201ENST00000322310 PPLO60437 1756 aa29.7■■■□□ 2.35
SSNA1-201ENST00000322310 MARF1Q9Y4F3 1742 aaKnown RBP29.69■■■□□ 2.34
SSNA1-201ENST00000322310 FOXD1Q16676 465 aa29.69■■■□□ 2.34
SSNA1-201ENST00000322310 GJD4Q96KN9 370 aaPredicted RBP29.68■■■□□ 2.34
SSNA1-201ENST00000322310 NUTM2FA1L443 756 aa29.67■■■□□ 2.34
SSNA1-201ENST00000322310 CCDC125Q86Z20 511 aa29.66■■■□□ 2.34
SSNA1-201ENST00000322310 WAPLQ7Z5K2 1190 aa29.63■■■□□ 2.33
SSNA1-201ENST00000322310 SLC4A1APQ9BWU0 796 aaKnown RBP29.63■■■□□ 2.33
SSNA1-201ENST00000322310 STK26Q9P289 416 aa29.63■■■□□ 2.33
SSNA1-201ENST00000322310 RRBP1Q9P2E9 1410 aaKnown RBP29.62■■■□□ 2.33
SSNA1-201ENST00000322310 ADGRF5Q8IZF2 1346 aa29.61■■■□□ 2.33
SSNA1-201ENST00000322310 LRPPRCP42704 1394 aaKnown RBP29.61■■■□□ 2.33
SSNA1-201ENST00000322310 RALGAPBQ86X10 1494 aa29.6■■■□□ 2.33
SSNA1-201ENST00000322310 GLI3P10071 1580 aa29.6■■■□□ 2.33
SSNA1-201ENST00000322310 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.59■■■□□ 2.33
SSNA1-201ENST00000322310 UNC5CLQ8IV45 518 aa29.58■■■□□ 2.33
SSNA1-201ENST00000322310 SLIT2O94813 1529 aa29.57■■■□□ 2.32
SSNA1-201ENST00000322310 PLEKHH1Q9ULM0 1364 aa29.57■■■□□ 2.32
SSNA1-201ENST00000322310 TECPR2O15040 1411 aa29.56■■■□□ 2.32
SSNA1-201ENST00000322310 BLMP54132 1417 aaPredicted RBP29.55■■■□□ 2.32
SSNA1-201ENST00000322310 SPATA31A3Q5VYP0 1347 aa29.55■■■□□ 2.32
SSNA1-201ENST00000322310 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
SSNA1-201ENST00000322310 RGL3Q3MIN7 710 aa29.52■■■□□ 2.32
SSNA1-201ENST00000322310 DEFB132Q7Z7B7 95 aa29.52■■■□□ 2.32
SSNA1-201ENST00000322310 USP32Q8NFA0 1604 aa29.52■■■□□ 2.32
SSNA1-201ENST00000322310 FMN2Q9NZ56 1722 aa29.51■■■□□ 2.32
SSNA1-201ENST00000322310 CCDC144AA2RUR9 1427 aa29.5■■■□□ 2.31
SSNA1-201ENST00000322310 ABCC11Q96J66 1382 aa29.5■■■□□ 2.31
SSNA1-201ENST00000322310 BRWD3Q6RI45 1802 aa29.5■■■□□ 2.31
SSNA1-201ENST00000322310 KRT28Q7Z3Y7 464 aa29.49■■■□□ 2.31
SSNA1-201ENST00000322310 KIF1AQ12756 1690 aa29.48■■■□□ 2.31
SSNA1-201ENST00000322310 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
SSNA1-201ENST00000322310 SPATA31E1Q6ZUB1 1445 aa29.46■■■□□ 2.31
SSNA1-201ENST00000322310 PLEKHG5O94827 1062 aa29.46■■■□□ 2.31
SSNA1-201ENST00000322310 SEPT12Q8IYM1 358 aa29.46■■■□□ 2.31
SSNA1-201ENST00000322310 IFT172Q9UG01 1749 aa29.45■■■□□ 2.31
SSNA1-201ENST00000322310 CABLES1Q8TDN4 633 aa29.45■■■□□ 2.31
SSNA1-201ENST00000322310 ANKRD30BQ9BXX2 1392 aa29.44■■■□□ 2.3
SSNA1-201ENST00000322310 HAP1P54257 671 aaPredicted RBP29.44■■■□□ 2.3
SSNA1-201ENST00000322310 PIK3C2GO75747 1445 aa29.43■■■□□ 2.3
SSNA1-201ENST00000322310 TNS3Q68CZ2 1445 aa29.43■■■□□ 2.3
SSNA1-201ENST00000322310 YTHDC2Q9H6S0 1430 aaKnown RBP29.43■■■□□ 2.3
SSNA1-201ENST00000322310 SF3B2Q13435 895 aaKnown RBP29.42■■■□□ 2.3
SSNA1-201ENST00000322310 VPS72Q15906 364 aa29.42■■■□□ 2.3
SSNA1-201ENST00000322310 PLCH1Q4KWH8 1693 aa29.4■■■□□ 2.3
SSNA1-201ENST00000322310 CCDC9Q9Y3X0 531 aaKnown RBP29.4■■■□□ 2.3
SSNA1-201ENST00000322310 PHF8Q9UPP1 1060 aa29.39■■■□□ 2.3
SSNA1-201ENST00000322310 RGPD8O14715 1765 aaPredicted RBP29.38■■■□□ 2.29
SSNA1-201ENST00000322310 PSME1Q06323 249 aa29.36■■■□□ 2.29
SSNA1-201ENST00000322310 LMOD2Q6P5Q4 547 aa29.36■■■□□ 2.29
SSNA1-201ENST00000322310 KRT27Q7Z3Y8 459 aa29.36■■■□□ 2.29
SSNA1-201ENST00000322310 ABCA3Q99758 1704 aa29.35■■■□□ 2.29
SSNA1-201ENST00000322310 NWD2Q9ULI1 1742 aa29.35■■■□□ 2.29
SSNA1-201ENST00000322310 ONECUT3O60422 494 aaPredicted RBP29.35■■■□□ 2.29
SSNA1-201ENST00000322310 NRXN1Q9ULB1 1477 aa29.33■■■□□ 2.29
SSNA1-201ENST00000322310 LRP5O75197 1615 aa29.32■■■□□ 2.28
SSNA1-201ENST00000322310 SBNO1A3KN83 1393 aa29.32■■■□□ 2.28
SSNA1-201ENST00000322310 SIRT1Q96EB6 747 aa29.32■■■□□ 2.28
SSNA1-201ENST00000322310 SAFB2Q14151 953 aaKnown RBP eCLIP29.31■■■□□ 2.28
SSNA1-201ENST00000322310 MPHOSPH9Q99550 1183 aa29.31■■■□□ 2.28
SSNA1-201ENST00000322310 A0A0G2JS52 829 aa29.3■■■□□ 2.28
SSNA1-201ENST00000322310 PSDA5PKW4 1024 aaPredicted RBP29.3■■■□□ 2.28
SSNA1-201ENST00000322310 FAM83GA6ND36 823 aa29.3■■■□□ 2.28
SSNA1-201ENST00000322310 MYT1Q01538 1121 aa29.3■■■□□ 2.28
SSNA1-201ENST00000322310 ARHGEF10O15013 1369 aa29.29■■■□□ 2.28
SSNA1-201ENST00000322310 C14orf93Q9H972 538 aaKnown RBP29.29■■■□□ 2.28
SSNA1-201ENST00000322310 CFAP70Q5T0N1 1121 aa29.27■■■□□ 2.28
SSNA1-201ENST00000322310 PMFBP1Q8TBY8 1022 aa29.27■■■□□ 2.28
SSNA1-201ENST00000322310 PRAM1Q96QH2 718 aa29.27■■■□□ 2.28
SSNA1-201ENST00000322310 FAM98CQ17RN3 349 aaKnown RBP29.26■■■□□ 2.27
SSNA1-201ENST00000322310 BAG6P46379 1132 aa29.25■■■□□ 2.27
SSNA1-201ENST00000322310 DHX57Q6P158 1386 aaKnown RBP29.25■■■□□ 2.27
SSNA1-201ENST00000322310 NRAPQ86VF7 1730 aa29.24■■■□□ 2.27
SSNA1-201ENST00000322310 HRCP23327 699 aa29.22■■■□□ 2.27
SSNA1-201ENST00000322310 BTG4Q9NY30 223 aa29.22■■■□□ 2.27
SSNA1-201ENST00000322310 ANKARQ7Z5J8 1434 aa29.2■■■□□ 2.26
SSNA1-201ENST00000322310 FAM182BQ5T319 152 aa29.19■■■□□ 2.26
SSNA1-201ENST00000322310 TRPM3Q9HCF6 1732 aaPredicted RBP29.18■■■□□ 2.26
SSNA1-201ENST00000322310 EN1Q05925 392 aaPredicted RBP29.18■■■□□ 2.26
SSNA1-201ENST00000322310 POGKQ9P215 609 aa29.18■■■□□ 2.26
SSNA1-201ENST00000322310 HIRIP3Q9BW71 556 aaPredicted RBP29.15■■■□□ 2.26
SSNA1-201ENST00000322310 DLC1Q96QB1 1528 aa29.15■■■□□ 2.26
SSNA1-201ENST00000322310 ADGRB2O60241 1585 aa29.14■■■□□ 2.26
SSNA1-201ENST00000322310 COL14A1Q05707 1796 aaKnown RBP29.14■■■□□ 2.26
SSNA1-201ENST00000322310 ALS2Q96Q42 1657 aa29.14■■■□□ 2.26
SSNA1-201ENST00000322310 RGPD1P0DJD0 1748 aa29.12■■■□□ 2.25
SSNA1-201ENST00000322310 R3HDM1Q15032 1099 aaKnown RBP29.11■■■□□ 2.25
SSNA1-201ENST00000322310 SPATA31A5Q5VU36 1347 aa29.11■■■□□ 2.25
SSNA1-201ENST00000322310 SPATA31A7Q8IWB4 1347 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms