RNA–Protein interactions for RNA: ENST00000320493.9

CFHR1-201, Transcript of complement factor H related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR1, Length 1,271 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-201ENST00000320493 DNAJB2P25686 324 aa8.98□□□□□ -0.97
CFHR1-201ENST00000320493 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
CFHR1-201ENST00000320493 PHOX2BQ99453 314 aa8.98□□□□□ -0.97
CFHR1-201ENST00000320493 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
CFHR1-201ENST00000320493 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
CFHR1-201ENST00000320493 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
CFHR1-201ENST00000320493 CD2BP2O95400 341 aaKnown RBP8.96□□□□□ -0.98
CFHR1-201ENST00000320493 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
CFHR1-201ENST00000320493 OATP04181 439 aa8.95□□□□□ -0.98
CFHR1-201ENST00000320493 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
CFHR1-201ENST00000320493 SENP2Q9HC62 589 aa8.95□□□□□ -0.98
CFHR1-201ENST00000320493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
CFHR1-201ENST00000320493 SCUBE3Q8IX30 993 aa8.94□□□□□ -0.98
CFHR1-201ENST00000320493 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
CFHR1-201ENST00000320493 CFHP08603 1231 aa8.93□□□□□ -0.98
CFHR1-201ENST00000320493 ZSCAN1Q8NBB4 408 aa8.92□□□□□ -0.98
CFHR1-201ENST00000320493 IRF6O14896 467 aa8.91□□□□□ -0.98
CFHR1-201ENST00000320493 RANGAP1P46060 587 aaPredicted RBP8.91□□□□□ -0.98
CFHR1-201ENST00000320493 ZMYND10O75800 440 aa8.9□□□□□ -0.98
CFHR1-201ENST00000320493 SLC10A3P09131 477 aa8.9□□□□□ -0.98
CFHR1-201ENST00000320493 SMPD1P17405 629 aa8.9□□□□□ -0.98
CFHR1-201ENST00000320493 SPSB2Q99619 263 aa8.9□□□□□ -0.98
CFHR1-201ENST00000320493 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
CFHR1-201ENST00000320493 MINK1Q8N4C8 1332 aaPredicted RBP8.88□□□□□ -0.99
CFHR1-201ENST00000320493 TTC24A2A3L6 582 aaPredicted RBP8.88□□□□□ -0.99
CFHR1-201ENST00000320493 BARGINQ6ZT62 677 aa8.88□□□□□ -0.99
CFHR1-201ENST00000320493 SLC16A10Q8TF71 515 aa8.88□□□□□ -0.99
CFHR1-201ENST00000320493 GMPRP36959 345 aa8.86□□□□□ -0.99
CFHR1-201ENST00000320493 SNIP1Q8TAD8 396 aaKnown RBP8.86□□□□□ -0.99
CFHR1-201ENST00000320493 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
CFHR1-201ENST00000320493 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
CFHR1-201ENST00000320493 FCF1Q9Y324 198 aaKnown RBP8.85□□□□□ -0.99
CFHR1-201ENST00000320493 WNT7AO00755 349 aa8.84□□□□□ -0.99
CFHR1-201ENST00000320493 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
CFHR1-201ENST00000320493 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
CFHR1-201ENST00000320493 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
CFHR1-201ENST00000320493 RDH13Q8NBN7 331 aa8.82□□□□□ -1
CFHR1-201ENST00000320493 THAP11Q96EK4 314 aa8.82□□□□□ -1
CFHR1-201ENST00000320493 REPIN1Q9BWE0 567 aaKnown RBP8.82□□□□□ -1
CFHR1-201ENST00000320493 PODXL2Q9NZ53 605 aa8.82□□□□□ -1
CFHR1-201ENST00000320493 PUS10Q3MIT2 529 aaKnown RBP8.81□□□□□ -1
CFHR1-201ENST00000320493 IRF7Q92985 503 aa8.81□□□□□ -1
CFHR1-201ENST00000320493 FAM160A2Q8N612 972 aaPredicted RBP8.8□□□□□ -1
CFHR1-201ENST00000320493 J3QL48 77 aa8.79□□□□□ -1
CFHR1-201ENST00000320493 CD46P15529 392 aa8.78□□□□□ -1
CFHR1-201ENST00000320493 SLC24A3Q9HC58 644 aa8.78□□□□□ -1
CFHR1-201ENST00000320493 HPS1Q92902 700 aa8.77□□□□□ -1.01
CFHR1-201ENST00000320493 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
CFHR1-201ENST00000320493 H3BM21 787 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 TRIM66O15016 1216 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 ZBTB24O43167 697 aaPredicted RBP8.76□□□□□ -1.01
CFHR1-201ENST00000320493 CLCN1P35523 988 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 GCGRP47871 477 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 AMHR2Q16671 573 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 SULF1Q8IWU6 871 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 MRGPRX2Q96LB1 330 aa8.76□□□□□ -1.01
CFHR1-201ENST00000320493 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
CFHR1-201ENST00000320493 FUT2Q10981 343 aa8.75□□□□□ -1.01
CFHR1-201ENST00000320493 KCNMA1Q12791 1236 aa8.75□□□□□ -1.01
CFHR1-201ENST00000320493 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
CFHR1-201ENST00000320493 MORN1Q5T089 497 aa8.75□□□□□ -1.01
CFHR1-201ENST00000320493 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
CFHR1-201ENST00000320493 PARP9Q8IXQ6 854 aa8.74□□□□□ -1.01
CFHR1-201ENST00000320493 GSK3AP49840 483 aa8.73□□□□□ -1.01
CFHR1-201ENST00000320493 RSPH4AQ5TD94 716 aa8.73□□□□□ -1.01
CFHR1-201ENST00000320493 AK7Q96M32 723 aa8.73□□□□□ -1.01
CFHR1-201ENST00000320493 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
CFHR1-201ENST00000320493 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
CFHR1-201ENST00000320493 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
CFHR1-201ENST00000320493 HLA-CQ95604 372 aa8.72□□□□□ -1.01
CFHR1-201ENST00000320493 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
CFHR1-201ENST00000320493 TRIM32Q13049 653 aa8.71□□□□□ -1.02
CFHR1-201ENST00000320493 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
CFHR1-201ENST00000320493 KCTD17Q8N5Z5 321 aa8.7□□□□□ -1.02
CFHR1-201ENST00000320493 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
CFHR1-201ENST00000320493 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
CFHR1-201ENST00000320493 KDM4AO75164 1064 aa8.68□□□□□ -1.02
CFHR1-201ENST00000320493 MS4A1P11836 297 aa8.68□□□□□ -1.02
CFHR1-201ENST00000320493 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
CFHR1-201ENST00000320493 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
CFHR1-201ENST00000320493 PDE4DQ08499 809 aa8.68□□□□□ -1.02
CFHR1-201ENST00000320493 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
CFHR1-201ENST00000320493 GUCA2AQ02747 115 aa8.67□□□□□ -1.02
CFHR1-201ENST00000320493 HOXA2O43364 376 aa8.66□□□□□ -1.02
CFHR1-201ENST00000320493 VEGFBP49765 207 aa8.66□□□□□ -1.02
CFHR1-201ENST00000320493 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
CFHR1-201ENST00000320493 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
CFHR1-201ENST00000320493 MMP16P51512 607 aa8.63□□□□□ -1.03
CFHR1-201ENST00000320493 BEGAINQ9BUH8 593 aa8.63□□□□□ -1.03
CFHR1-201ENST00000320493 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
CFHR1-201ENST00000320493 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
CFHR1-201ENST00000320493 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
CFHR1-201ENST00000320493 SPIRE2Q8WWL2 714 aa8.62□□□□□ -1.03
CFHR1-201ENST00000320493 USP46P62068 366 aa8.61□□□□□ -1.03
CFHR1-201ENST00000320493 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
CFHR1-201ENST00000320493 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
CFHR1-201ENST00000320493 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
CFHR1-201ENST00000320493 WNT7BP56706 349 aa8.6□□□□□ -1.03
CFHR1-201ENST00000320493 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
CFHR1-201ENST00000320493 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms